Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 5.2e-226 787.3 386 100.0
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.6e-195 684.9 386 88.9
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.3e-192 676.4 400 85.5
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.8e-189 666.0 386 86.8
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.9e-151 539.7 369 74.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.1e-150 536.2 370 73.8
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 5.2e-149 531.6 375 72.3
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 2.2e-147 526.2 349 75.1
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 6.3e-147 524.6 388 69.1
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.1e-146 523.9 350 74.3
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 3.5e-145 518.8 379 70.4
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.0e-144 517.3 379 71.2
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.7e-144 516.5 354 74.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 5.0e-144 515.0 369 71.0
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.1e-143 513.8 355 73.5
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.5e-143 513.5 364 70.9
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 3.2e-143 512.3 374 69.5
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 5.5e-143 511.5 358 72.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.2e-142 510.4 350 73.4
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.6e-142 510.0 345 75.1
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.1e-142 509.6 351 72.1
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 2.1e-142 509.6 374 68.4
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 4.7e-142 508.4 386 66.3
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 4.7e-142 508.4 379 69.4
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 6.1e-142 508.1 356 71.6
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 6.1e-142 508.1 372 68.3
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.4e-141 506.9 351 73.2
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.4e-141 506.9 346 72.8
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 3.0e-141 505.8 351 71.8
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.0e-141 505.8 355 70.4
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.0e-141 505.4 363 71.3
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 6.7e-141 504.6 369 69.1
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 8.8e-141 504.2 346 71.7
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.2e-140 503.8 374 67.9
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-140 503.4 351 71.2
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.5e-140 503.4 354 70.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 2.6e-140 502.7 378 68.8
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.3e-140 502.3 351 72.6
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 4.4e-140 501.9 546 51.5
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 5.7e-140 501.5 369 69.6
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 5.7e-140 501.5 362 69.3
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 5.7e-140 501.5 374 67.6
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.7e-140 501.5 374 67.6
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 9.7e-140 500.7 377 67.4
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 9.7e-140 500.7 350 71.1
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.7e-139 500.0 355 70.4
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.7e-139 500.0 370 68.9
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.2e-139 499.6 372 69.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.8e-139 499.2 375 66.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 3.7e-139 498.8 370 69.5
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 6.3e-139 498.0 350 70.9
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 8.2e-139 497.7 381 68.5
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 8.2e-139 497.7 370 68.6
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 8.2e-139 497.7 379 68.1
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.1e-138 497.3 349 71.6
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.8e-138 496.5 371 68.7
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.8e-138 496.5 360 68.6
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.4e-138 496.1 378 68.5
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 3.1e-138 495.7 369 69.1
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.1e-138 495.4 356 70.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 5.3e-138 495.0 354 68.4
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 7.0e-138 494.6 355 70.1
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 9.1e-138 494.2 357 72.3
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.2e-137 493.8 376 66.8
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.2e-137 493.8 362 68.8
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.6e-137 493.4 357 69.5
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 3.5e-137 492.3 370 68.9
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 3.5e-137 492.3 348 70.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.9e-137 491.5 348 70.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.0e-136 490.7 350 71.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.0e-136 490.7 366 68.6
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.7e-136 490.0 372 67.2
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.9e-136 489.2 388 67.0
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.9e-136 489.2 360 69.2
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.5e-136 487.6 375 66.4
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.5e-135 486.9 354 69.5
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.5e-135 486.1 385 65.7
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 4.2e-135 485.3 358 69.0
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 4.2e-135 485.3 366 67.8
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 2.1e-134 483.0 338 73.4
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 3.6e-134 482.3 360 68.3
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 8.0e-134 481.1 374 66.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 8.0e-134 481.1 372 65.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.4e-133 480.3 335 72.5
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.8e-133 479.9 352 68.2
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.8e-133 479.9 354 69.2
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.0e-133 478.8 369 65.9
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 5.2e-133 478.4 374 65.5
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.2e-133 478.4 372 65.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 6.8e-133 478.0 370 66.2
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 6.8e-133 478.0 355 67.6
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 6.8e-133 478.0 372 67.2
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 8.8e-133 477.6 374 64.7
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 8.8e-133 477.6 360 67.5
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.8e-133 477.6 353 70.3
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 8.8e-133 477.6 355 68.2
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.6e-132 476.1 327 73.7
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.6e-132 476.1 378 65.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 5.7e-132 474.9 385 63.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.7e-131 473.4 372 65.9
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 6.3e-131 471.5 360 66.9
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 6.3e-131 471.5 427 61.1
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.4e-130 470.3 377 65.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 3.1e-130 469.2 380 63.7
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 4.1e-130 468.8 373 64.9
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 5.9e-129 464.9 360 68.3
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 7.7e-129 464.5 355 68.5
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.3e-128 463.8 374 66.3
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 3.2e-127 459.1 350 65.1
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.6e-126 455.7 350 68.0
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.1e-126 454.9 353 66.3
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.5e-124 450.3 427 57.6
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.4e-124 449.1 354 64.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 5.7e-124 448.4 351 64.7
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.5e-124 448.0 348 66.4
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.8e-124 447.6 328 70.4
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.4e-122 443.7 374 61.8
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.2e-121 440.7 364 63.7
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 2.7e-121 439.5 355 63.1
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.0e-120 437.6 346 65.9
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.7e-120 436.8 330 68.8
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.7e-120 436.8 345 64.1
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 5.0e-120 435.3 345 64.6
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 7.3e-119 431.4 351 63.2
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 6.1e-118 428.3 288 73.6
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 2.3e-112 409.8 372 61.3
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 6.6e-112 408.3 350 59.7
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.2e-108 397.5 288 71.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 4.9e-107 392.1 277 71.5
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.9e-107 392.1 349 59.3
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 3.9e-104 382.5 310 66.8
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-98 364.4 270 67.4
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 3.2e-98 362.8 310 62.6
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.8e-93 347.1 367 51.5
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 5.8e-92 342.0 255 68.2
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 7.6e-92 341.7 355 51.5
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 4.1e-90 335.9 374 52.1
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.9e-87 327.0 229 72.5
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 6.9e-85 318.5 245 67.8
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 9.3e-82 308.1 233 70.0
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 7.8e-81 305.1 311 52.1
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.3e-80 304.3 250 64.4
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.5e-68 264.2 193 67.9
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 3.4e-68 263.1 218 63.3
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 4.2e-66 256.1 186 69.9
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 4.2e-66 256.1 194 67.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 3.5e-65 253.1 406 38.9
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-63 248.1 167 73.7
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.6e-60 235.3 168 67.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.8e-56 224.2 159 70.4
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.3e-46 189.1 145 66.9
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.8e-45 187.6 276 42.0
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.0e-44 184.1 193 51.8
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 6.1e-41 172.6 357 35.9
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 7.7e-36 155.6 112 70.5
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.2e-27 127.5 142 49.3
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 6.5e-27 125.9 75 80.0
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 4.4e-23 113.2 291 30.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.7e-23 112.8 311 31.2
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 7.0e-21 105.9 405 28.1
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-20 104.4 69 68.1
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.5e-19 99.4 63 68.3
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.2e-18 95.9 151 40.4
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.1e-17 94.4 57 75.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.7e-17 94.0 91 53.8
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 8.8e-16 89.0 56 80.4
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.5e-12 76.6 62 61.3
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.2e-09 68.6 150 32.7


User provided reference genes

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