Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.7e-148 529.3 258 100.0
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.2e-119 432.6 270 83.3
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 3.4e-112 408.7 287 73.5
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 8.0e-106 387.5 277 74.0
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.0e-105 387.1 269 75.1
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.5e-104 383.3 275 71.6
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.0e-104 382.9 248 78.2
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 7.5e-104 380.9 279 73.1
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 7.5e-104 380.9 279 73.1
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 7.5e-104 380.9 275 72.0
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.3e-103 380.2 287 71.4
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.7e-103 379.8 278 71.9
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.7e-103 378.6 279 72.8
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 3.7e-103 378.6 290 70.0
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 6.4e-103 377.9 276 71.4
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 8.3e-103 377.5 280 70.0
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.4e-102 376.7 274 72.6
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.4e-102 376.7 278 71.2
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 1.4e-102 376.7 275 72.7
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 1.9e-102 376.3 274 71.5
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 3.2e-102 375.6 276 71.4
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 7.0e-102 374.4 276 71.0
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 9.2e-102 374.0 275 71.6
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 1.2e-101 373.6 274 73.4
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 1.2e-101 373.6 276 72.1
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.7e-101 372.5 282 68.8
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 3.5e-101 372.1 275 72.0
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 4.6e-101 371.7 281 69.0
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.6e-101 371.7 281 69.0
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 4.6e-101 371.7 275 72.4
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 4.6e-101 371.7 275 71.6
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.0e-100 370.5 272 71.7
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-100 370.2 281 68.7
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-100 370.2 281 68.7
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.1e-99 367.1 275 70.9
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 1.5e-99 366.7 276 70.3
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.5e-99 365.9 275 69.8
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 3.3e-99 365.5 266 72.2
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 4.3e-99 365.2 275 70.9
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 4.3e-99 365.2 275 70.2
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 1.6e-98 363.2 267 71.2
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.6e-98 363.2 274 70.1
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 2.8e-98 362.5 275 70.2
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.1e-97 360.5 271 70.1
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.8e-97 359.8 277 69.3
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 1.5e-96 356.7 276 68.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.6e-96 355.9 272 69.1
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 2.6e-96 355.9 272 69.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 3.4e-96 355.5 275 69.1
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 7.5e-96 354.4 278 68.3
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 1.3e-95 353.6 277 69.3
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.7e-95 353.2 274 69.0
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 3.7e-95 352.1 272 67.6
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 6.4e-95 351.3 271 67.9
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 6.4e-95 351.3 276 68.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 8.3e-95 350.9 276 67.0
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.4e-94 350.1 275 67.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 7.1e-94 347.8 276 67.8
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 9.2e-94 347.4 276 66.3
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 9.2e-94 347.4 256 69.9
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.2e-93 347.1 279 67.4
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.6e-93 346.7 276 68.1
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 4.6e-93 345.1 276 67.0
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 6.0e-93 344.7 273 66.7
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 6.0e-93 344.7 275 66.5
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.3e-92 343.6 262 69.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.7e-92 343.2 239 74.1
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 3.9e-92 342.0 263 68.4
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.1e-91 340.5 275 67.3
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.5e-91 340.1 284 65.1
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.5e-91 339.3 275 65.8
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 9.5e-91 337.4 271 65.7
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 2.1e-90 336.3 280 65.0
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 2.8e-90 335.9 271 64.9
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.6e-90 335.5 278 63.3
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 4.7e-90 335.1 280 63.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.1e-89 334.0 265 66.4
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.8e-89 333.2 275 64.0
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 4.0e-89 332.0 283 63.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 5.2e-89 331.6 275 64.4
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 1.2e-88 330.5 281 63.7
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 2.0e-88 329.7 284 63.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 2.6e-88 329.3 254 67.3
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 4.4e-88 328.6 277 64.6
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 5.8e-88 328.2 284 63.0
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 5.8e-88 328.2 284 63.4
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 7.6e-88 327.8 284 62.7
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 7.6e-88 327.8 284 63.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.3e-87 327.0 281 63.0
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 1.7e-87 326.6 283 61.8
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 2.2e-87 326.2 284 62.3
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 2.9e-87 325.9 285 62.8
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 2.9e-87 325.9 285 62.8
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 1.1e-86 323.9 284 62.0
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.1e-86 323.9 272 63.2
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 1.9e-86 323.2 285 61.4
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 1.9e-86 323.2 285 61.4
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 1.9e-86 323.2 279 62.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 2.4e-86 322.8 277 63.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 4.1e-86 322.0 285 62.1
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 2.7e-85 319.3 230 70.0
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 7.8e-85 317.8 276 62.0
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 1.9e-83 313.2 283 60.4
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.2e-82 310.5 282 59.9
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 4.9e-79 298.5 277 54.9
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 4.3e-75 285.4 266 60.2
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-73 279.3 258 59.3
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.2e-69 267.3 258 57.4
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 3.0e-68 262.7 227 63.0
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 8.7e-68 261.2 169 77.5
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 1.1e-67 260.8 207 67.1
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 2.5e-67 259.6 221 62.9
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.1e-65 254.2 244 56.6
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 2.6e-64 249.6 266 53.8
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 7.1e-62 241.5 168 73.2
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 5.1e-60 235.3 168 71.4
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.4e-57 226.5 169 69.2
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 3.1e-57 226.1 169 68.0
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 1.6e-53 213.8 260 46.9
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.8e-52 210.3 233 48.9
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 3.0e-52 209.5 252 44.8
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 9.7e-43 177.9 194 50.5
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 5.3e-41 172.2 233 40.3
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.7e-39 167.2 138 65.2
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.3e-34 148.7 150 56.7
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 9.4e-30 134.8 246 32.1
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.8e-28 128.3 86 79.1
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.7e-26 124.0 81 80.2
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.0e-24 117.1 280 31.8
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 2.9e-23 113.2 194 34.0
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.3e-20 103.6 54 90.7
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 5.2e-20 102.4 54 88.9
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 3.7e-18 96.3 52 88.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 7.2e-06 55.5 163 28.8
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 9.4e-06 55.1 52 63.5


User provided reference genes

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