Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 7.0e-69 263.8 134 100.0
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 1.7e-38 162.9 107 78.5
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 1.6e-36 156.4 87 90.8
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 2.7e-36 155.6 85 91.8
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 1.7e-35 152.9 83 94.0
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 1.7e-35 152.9 83 94.0
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 1.7e-35 152.9 83 94.0
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 1.7e-35 152.9 84 91.7
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 2.3e-35 152.5 83 92.8
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 2.3e-35 152.5 83 92.8
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 2.3e-35 152.5 83 92.8
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 2.9e-35 152.1 83 91.6
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 2.9e-35 152.1 83 92.8
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 3.9e-35 151.8 83 91.6
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 3.9e-35 151.8 83 92.8
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 5.0e-35 151.4 83 91.6
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 5.0e-35 151.4 83 91.6
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 6.6e-35 151.0 82 92.7
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 6.6e-35 151.0 83 90.4
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 6.6e-35 151.0 83 91.6
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 6.6e-35 151.0 86 86.0
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 6.6e-35 151.0 83 91.6
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 6.6e-35 151.0 83 91.6
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 8.6e-35 150.6 83 91.6
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 8.6e-35 150.6 83 91.6
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 8.6e-35 150.6 83 90.4
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 8.6e-35 150.6 83 90.4
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 1.1e-34 150.2 83 89.2
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 1.1e-34 150.2 83 89.2
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 1.5e-34 149.8 83 90.4
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 1.9e-34 149.4 83 88.0
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 1.9e-34 149.4 88 84.1
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 1.9e-34 149.4 82 92.7
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 1.9e-34 149.4 83 89.2
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 1.9e-34 149.4 83 89.2
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 90.4
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 2.5e-34 149.1 91 81.3
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 2.5e-34 149.1 82 90.2
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 88.0
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 88.0
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 2.5e-34 149.1 83 89.2
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 3.3e-34 148.7 83 89.2
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 3.3e-34 148.7 83 89.2
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 3.3e-34 148.7 83 90.4
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 4.3e-34 148.3 84 85.7
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 4.3e-34 148.3 83 88.0
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 4.3e-34 148.3 82 90.2
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 5.6e-34 147.9 83 86.7
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 5.6e-34 147.9 83 88.0
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 7.3e-34 147.5 83 88.0
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 7.3e-34 147.5 83 88.0
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 7.3e-34 147.5 81 91.4
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 7.3e-34 147.5 81 91.4
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 7.3e-34 147.5 83 86.7
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 7.3e-34 147.5 83 89.2
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 9.5e-34 147.1 83 88.0
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 9.5e-34 147.1 83 88.0
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 9.5e-34 147.1 83 88.0
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 9.5e-34 147.1 83 88.0
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 9.5e-34 147.1 83 89.2
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 1.2e-33 146.7 83 89.2
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 1.2e-33 146.7 110 71.8
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 1.6e-33 146.4 87 86.2
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.1e-33 146.0 81 90.1
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.1e-33 146.0 83 89.2
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 2.8e-33 145.6 83 86.7
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 2.8e-33 145.6 83 85.5
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 2.8e-33 145.6 83 88.0
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 2.8e-33 145.6 82 89.0
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 2.8e-33 145.6 83 89.2
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 3.6e-33 145.2 83 85.5
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 3.6e-33 145.2 82 87.8
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 3.6e-33 145.2 80 91.2
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.6e-33 145.2 83 88.0
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 3.6e-33 145.2 99 74.7
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.7e-33 144.8 83 88.0
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.7e-33 144.8 83 88.0
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 4.7e-33 144.8 83 84.3
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 6.2e-33 144.4 83 86.7
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 8.0e-33 144.1 83 84.3
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 8.0e-33 144.1 83 84.3
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 8.0e-33 144.1 83 81.9
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 1.0e-32 143.7 110 69.1
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 1.0e-32 143.7 83 83.1
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 1.0e-32 143.7 85 82.4
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 1.4e-32 143.3 83 84.3
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 1.8e-32 142.9 83 86.7
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 2.3e-32 142.5 82 86.6
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 3.1e-32 142.1 82 85.4
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 3.1e-32 142.1 83 83.1
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 3.1e-32 142.1 83 83.1
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 3.1e-32 142.1 83 83.1
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 4.0e-32 141.7 83 84.3
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 4.0e-32 141.7 83 84.3
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 5.2e-32 141.4 83 84.3
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 5.2e-32 141.4 83 84.3
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 5.2e-32 141.4 83 84.3
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 6.8e-32 141.0 83 81.9
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 6.8e-32 141.0 80 91.2
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 8.9e-32 140.6 83 85.5
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 8.9e-32 140.6 83 81.9
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 83.1
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 83.1
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 84.3
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 1.2e-31 140.2 82 84.1
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 84.3
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 84.3
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 1.2e-31 140.2 82 84.1
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 1.2e-31 140.2 83 81.9
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 2.0e-31 139.4 83 81.9
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 2.6e-31 139.0 90 78.9
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 2.6e-31 139.0 83 81.9
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 2.6e-31 139.0 83 81.9
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 2.6e-31 139.0 83 79.5
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 2.6e-31 139.0 83 83.1
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 3.4e-31 138.7 83 84.3
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 3.4e-31 138.7 83 83.1
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.4e-31 138.7 77 90.9
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 4.4e-31 138.3 77 89.6
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 5.8e-31 137.9 83 80.7
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 9.8e-31 137.1 83 80.7
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 9.8e-31 137.1 83 80.7
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 1.3e-30 136.7 83 80.7
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 4.9e-30 134.8 83 77.1
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 2.7e-28 129.0 83 72.3
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 2.7e-28 129.0 83 77.1
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 4.6e-28 128.3 98 65.3
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.6e-28 128.3 74 89.2
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 1.7e-27 126.3 69 89.9
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 2.3e-27 125.9 83 71.1
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 5.0e-27 124.8 83 71.1
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.9e-26 122.9 86 69.8
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 3.3e-26 122.1 67 91.0
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.8e-25 119.0 84 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 6.8e-24 114.4 81 69.1
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 9.8e-23 110.5 88 65.9
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 4.9e-22 108.2 60 88.3
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 6.4e-22 107.8 58 89.7
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 8.3e-22 107.5 58 91.4
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.4e-21 105.9 74 68.9
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 4.6e-20 101.7 83 66.3
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.3e-19 100.1 65 73.8
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 3.9e-19 98.6 75 65.3
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 4.3e-18 95.1 83 62.7
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 8.9e-16 87.4 52 80.8
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 8.9e-16 87.4 52 80.8
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 1.2e-12 77.0 82 43.9
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 1.2e-12 77.0 93 52.7
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 1.0e-11 73.9 78 43.6
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 1.6e-09 66.6 82 41.5


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