Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 7.7e-74 280.4 144 100.0
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.0e-73 280.0 144 99.3
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.4e-69 265.0 144 93.1
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.1e-67 260.0 144 91.0
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 4.5e-66 254.6 144 89.6
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 5.9e-66 254.2 157 84.1
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.0e-65 253.4 144 87.5
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 3.8e-65 251.5 144 91.0
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 8.6e-65 250.4 142 88.0
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 8.6e-65 250.4 142 88.0
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.5e-64 249.6 144 86.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.9e-64 249.2 144 89.6
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.5e-64 247.7 142 87.3
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 9.5e-64 246.9 144 87.5
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.1e-63 245.7 144 87.5
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 3.6e-63 245.0 134 93.3
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.6e-63 245.0 145 86.2
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 4.7e-63 244.6 146 87.7
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 4.7e-63 244.6 145 86.2
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.0e-62 243.4 145 85.5
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.0e-62 243.4 146 86.3
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.0e-62 243.4 143 88.8
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.4e-62 243.0 144 86.8
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.4e-62 243.0 140 87.1
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 3.0e-62 241.9 142 86.6
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.0e-62 241.9 144 88.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 4.0e-62 241.5 145 85.5
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 4.0e-62 241.5 144 87.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.1
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.1
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.1
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 5.2e-62 241.1 146 86.3
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.1
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.8
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 6.8e-62 240.7 145 85.5
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 8.9e-62 240.4 132 93.2
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 84.8
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 86.9
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.5e-61 239.6 144 85.4
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 87.6
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.5e-61 239.6 144 86.8
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 84.1
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.0e-61 239.2 145 84.8
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 2.0e-61 239.2 142 85.9
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.6e-61 238.8 132 90.9
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.4e-61 238.4 145 84.8
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 3.4e-61 238.4 145 84.1
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 84.1
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 84.7
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 84.1
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 84.0
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.4e-61 238.0 141 86.5
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.7e-61 237.7 145 86.9
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.7e-61 237.7 145 86.9
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 5.7e-61 237.7 146 84.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 9.8e-61 236.9 145 83.4
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 9.8e-61 236.9 145 84.1
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 9.8e-61 236.9 144 86.1
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 83.4
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 84.8
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.7e-60 236.1 145 83.4
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 2.2e-60 235.7 144 85.4
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 2.2e-60 235.7 146 84.2
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.8e-60 235.3 141 85.1
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.7e-60 235.0 145 83.4
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 84.1
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 84.1
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 84.1
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 84.1
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 84.1
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.3e-60 234.2 145 84.1
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.3e-60 234.2 145 82.1
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 83.4
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 83.4
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 1.8e-59 232.6 145 82.8
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.8e-59 232.6 145 83.4
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 85.5
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 4.5e-58 228.0 130 88.5
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 7.8e-58 227.3 145 81.4
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.0e-57 226.9 146 80.8
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.7e-57 226.1 142 83.8
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 5.0e-57 224.6 145 82.8
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.1e-56 223.4 130 86.9
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 2.5e-56 222.2 146 80.8
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.5e-56 222.2 146 82.2
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 80.1
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 82.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 82.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 3.3e-56 221.9 144 81.2
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 4.3e-56 221.5 123 89.4
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 4.3e-56 221.5 144 82.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 7.3e-56 220.7 144 81.2
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.6e-55 219.5 145 81.4
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.1e-55 219.2 146 80.8
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.6e-55 218.4 145 80.7
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 3.6e-55 218.4 146 78.1
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 4.7e-55 218.0 145 81.4
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 6.1e-55 217.6 145 82.1
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 201 61.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 145 80.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 78.6
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.0e-54 215.3 144 79.9
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 6.8e-54 214.2 146 78.8
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 6.8e-54 214.2 145 81.4
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 6.8e-54 214.2 145 81.4
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 6.8e-54 214.2 145 81.4
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 146 78.8
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 8.9e-54 213.8 146 76.7
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 1.5e-53 213.0 145 80.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 1.5e-53 213.0 145 78.6
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 5.8e-53 211.1 143 77.6
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 7.5e-53 210.7 142 80.3
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 7.5e-53 210.7 142 78.9
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.9e-52 208.8 145 78.6
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.9e-52 208.8 145 78.6
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 3.7e-52 208.4 135 81.5
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.8e-51 206.1 145 78.6
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 9.2e-51 203.8 128 83.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.6e-50 203.0 146 76.0
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 2.0e-50 202.6 182 65.9
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 3.5e-50 201.8 143 74.8
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 7.8e-50 200.7 147 74.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 3.0e-49 198.7 144 75.7
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 3.0e-49 198.7 144 76.4
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.6e-49 197.6 150 74.0
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.9e-48 196.1 133 78.9
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 4.3e-48 194.9 147 72.8
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 145 75.2
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 145 75.2
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 145 75.2
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 144 74.3
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 4.7e-47 191.4 145 71.7
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.8e-46 189.5 144 73.6
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.1e-46 188.7 168 63.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 5.8e-45 184.5 120 82.5
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.3e-44 183.3 142 73.2
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.7e-44 181.8 144 72.9
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 6.4e-44 181.0 144 71.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.9e-43 179.5 145 69.0
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 5.4e-43 177.9 144 69.4
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.0e-43 177.6 133 74.4
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 7.8e-42 174.1 138 72.5
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.0e-41 173.7 146 71.2
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.0e-41 173.7 138 71.7
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.0e-41 173.7 115 81.7
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.3e-41 173.3 146 68.5
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.3e-41 173.3 145 68.3
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.7e-41 172.9 95 87.4
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 3.9e-41 171.8 132 72.0
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 8.6e-41 170.6 133 74.4
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.5e-40 169.9 120 79.2
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 5.6e-40 167.9 137 75.2
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.6e-40 167.9 122 78.7
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.7e-39 164.9 91 89.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.1e-38 162.2 125 75.2
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 2.0e-37 159.5 144 64.6
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 3.7e-36 155.2 113 77.9
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 5.4e-35 151.4 98 83.7
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 9.2e-35 150.6 111 73.0
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 9.2e-35 150.6 122 72.1
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 8.6e-33 144.1 142 57.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 8.6e-33 144.1 103 77.7
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.6e-31 139.8 82 80.5
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.7e-28 129.8 130 58.5
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 8.4e-28 127.5 135 58.5
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-26 123.2 106 71.7
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 7.8e-26 120.9 69 82.6
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-25 120.6 120 61.7
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-25 120.6 120 61.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-25 119.0 64 89.1
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 5.1e-25 118.2 128 57.8
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.1e-25 118.2 144 54.2
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 5.1e-25 118.2 99 71.7
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 8.7e-25 117.5 80 77.5
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.5e-24 116.7 132 53.8
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 5.6e-24 114.8 76 78.9
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-23 113.6 77 76.6
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.2e-20 102.8 98 60.2
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 6.4e-20 101.3 81 67.9
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.3e-15 87.0 76 68.4
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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