Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 6.1e-163 577.4 288 100.0
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 4.3e-148 528.1 288 92.4
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 1.2e-110 403.7 279 72.8
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 1.7e-101 373.2 293 65.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 1.1e-100 370.5 279 65.9
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 1.1e-100 370.5 291 64.6
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 2.5e-100 369.4 271 68.3
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 2.5e-100 369.4 267 69.3
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 2.1e-99 366.3 280 66.8
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 6.2e-99 364.8 283 65.0
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.4e-98 363.6 251 70.1
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 3.1e-98 362.5 291 62.5
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 5.3e-98 361.7 280 66.1
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 6.9e-98 361.3 245 71.0
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 9.0e-98 360.9 282 65.6
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 1.5e-97 360.1 280 65.7
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 7.6e-97 357.8 287 65.2
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 6.4e-96 354.8 260 68.5
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 1.1e-95 354.0 282 63.8
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 3.2e-95 352.4 278 65.1
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 3.2e-95 352.4 280 63.2
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 4.2e-95 352.1 268 64.9
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 5.5e-95 351.7 275 65.8
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.1e-94 349.7 256 68.0
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 7.9e-94 347.8 279 62.4
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.9e-94 347.8 279 62.4
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.3e-93 347.1 279 62.0
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 1.8e-93 346.7 265 66.0
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 1.8e-93 346.7 274 63.9
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.9e-93 345.5 279 61.6
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 5.1e-93 345.1 250 67.6
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.7e-93 344.4 279 61.6
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 1.1e-92 344.0 266 64.7
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 1.9e-92 343.2 269 64.7
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 5.6e-92 341.7 226 71.7
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 1.6e-91 340.1 269 63.9
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.8e-90 336.7 271 61.6
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 4.0e-90 335.5 267 65.5
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 5.3e-90 335.1 258 67.1
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.2e-89 334.0 264 61.4
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 2.0e-89 333.2 279 61.3
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 3.4e-89 332.4 273 59.0
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 4.5e-89 332.0 283 59.0
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 5.8e-89 331.6 280 59.6
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 7.6e-89 331.3 276 61.6
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 1.0e-88 330.9 259 64.1
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 1.0e-88 330.9 280 61.4
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 2.2e-88 329.7 287 56.8
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 3.8e-88 328.9 269 59.1
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 4.9e-88 328.6 324 54.3
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 6.5e-88 328.2 266 60.5
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 6.5e-88 328.2 269 61.3
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 6.5e-88 328.2 267 59.6
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 8.4e-88 327.8 277 57.0
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 1.9e-87 326.6 266 62.4
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 4.2e-87 325.5 276 59.8
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 5.5e-87 325.1 264 59.5
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 7.1e-87 324.7 278 59.4
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 7.1e-87 324.7 264 59.5
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 9.3e-87 324.3 280 57.5
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 9.3e-87 324.3 280 57.5
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 9.3e-87 324.3 280 57.5
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 9.3e-87 324.3 271 57.6
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.1e-86 323.2 283 58.0
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.1e-86 323.2 283 58.0
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 3.5e-86 322.4 271 57.2
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 4.6e-86 322.0 266 59.8
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 7.9e-86 321.2 297 55.2
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 1.3e-85 320.5 248 62.5
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 1.8e-85 320.1 268 60.8
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.8e-85 320.1 286 55.9
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 5.1e-85 318.5 279 55.6
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 2.5e-84 316.2 284 58.1
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 2.5e-84 316.2 271 59.0
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.3e-84 315.8 281 55.9
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 5.7e-84 315.1 239 64.9
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 7.4e-84 314.7 239 65.3
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.3e-83 313.9 282 55.3
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 2.8e-83 312.8 265 59.6
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 6.3e-83 311.6 270 58.1
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 8.2e-83 311.2 265 59.6
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 2.4e-82 309.7 285 54.7
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 2.4e-82 309.7 283 55.8
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 6.9e-82 308.1 272 58.1
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 1.2e-81 307.4 265 59.6
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 2.6e-81 306.2 283 57.6
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 7.6e-81 304.7 288 55.9
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 1.1e-79 300.8 310 51.6
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.5e-79 299.7 289 56.4
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 1.1e-76 290.8 219 68.0
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 1.2e-73 280.8 257 54.1
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 7.7e-73 278.1 228 64.5
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.2e-70 270.8 266 52.3
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 3.6e-70 269.2 233 56.2
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 8.8e-69 264.6 231 57.1
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.6e-68 263.1 289 49.5
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 5.7e-68 261.9 265 50.2
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 1.3e-67 260.8 388 39.7
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.3e-67 260.8 241 51.5
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 6.5e-64 248.4 175 68.6
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 2.6e-60 236.5 285 46.7
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.4e-58 230.7 276 48.6
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.3e-56 224.2 258 47.7
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.2e-46 191.0 243 43.2
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 6.1e-46 188.7 189 49.7
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 6.1e-46 188.7 267 41.6
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 2.5e-39 166.8 235 40.9
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 2.3e-37 160.2 126 67.5
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 7.5e-36 155.2 263 36.1
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 9.2e-34 148.3 100 64.0
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 9.2e-34 148.3 100 64.0
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.2e-34 148.3 169 49.1
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 2.7e-33 146.7 146 53.4
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.3e-32 144.4 167 47.9
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 1.0e-29 134.8 262 30.9
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 5.2e-29 132.5 84 76.2
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 2.9e-27 126.7 249 33.7
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 8.3e-27 125.2 81 76.5
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 1.0e-21 108.2 246 30.9
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 6.8e-21 105.5 123 47.2
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 2.0e-20 104.0 294 29.9
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 3.4e-20 103.2 230 32.2
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 1.4e-18 97.8 74 67.6
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.0e-17 94.0 103 48.5
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 2.3e-16 90.5 137 40.9
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 3.3e-15 86.7 67 59.7
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 6.2e-14 82.4 88 48.9
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 7.5e-12 75.5 50 72.0
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 4.9e-11 72.8 43 72.1
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.4e-10 71.2 57 59.6


User provided reference genes

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