Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 0.0e+00 1265.8 632 100.0
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 9.2e-305 1049.7 719 78.2
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 3.8e-290 1001.1 729 74.3
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 4.8e-221 771.5 685 60.9
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 4.1e-220 768.5 683 60.5
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 1.3e-213 746.9 718 57.1
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 1.7e-213 746.5 669 60.7
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 6.3e-213 744.6 725 56.1
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.4e-212 743.4 722 56.0
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 5.9e-211 738.0 725 55.3
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 7.8e-211 737.6 679 59.9
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 3.6e-208 728.8 680 58.8
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.1e-208 728.0 722 56.0
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 2.6e-206 722.6 677 58.9
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.3e-205 720.3 732 55.3
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 2.2e-205 719.5 725 55.4
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.7e-202 709.9 730 54.5
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 1.7e-202 709.9 723 54.8
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 1.9e-201 706.4 720 54.4
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 9.5e-201 704.1 718 54.7
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.2e-200 703.7 682 56.9
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 6.2e-200 701.4 719 54.1
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 4.0e-199 698.7 725 52.8
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 6.8e-199 698.0 720 54.2
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.2e-195 687.2 738 52.2
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.2e-195 687.2 738 52.2
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 7.3e-193 677.9 680 55.3
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.2e-192 677.2 682 55.6
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 6.2e-192 674.9 718 52.2
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 5.2e-191 671.8 676 53.6
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 2.6e-190 669.5 718 52.8
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.4e-190 669.1 715 51.6
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 5.8e-190 668.3 677 55.5
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.3e-189 667.2 696 53.6
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 3.7e-189 665.6 672 54.6
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.4e-188 663.7 678 54.3
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 2.1e-187 659.8 722 50.1
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.7e-186 656.8 718 52.4
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 3.0e-186 656.0 586 59.7
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.1e-185 654.1 673 53.8
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.2e-184 650.6 681 54.3
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.6e-184 649.0 730 50.3
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 8.1e-184 647.9 676 53.4
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 1.4e-183 647.1 673 53.9
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 1.8e-183 646.7 732 50.1
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.8e-183 646.7 732 51.1
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 5.2e-183 645.2 719 50.5
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 8.9e-183 644.4 735 50.7
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 8.9e-183 644.4 717 51.0
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 2.6e-182 642.9 676 53.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 3.4e-182 642.5 689 51.7
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 3.4e-182 642.5 676 53.3
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 9.9e-182 641.0 680 52.1
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 2.2e-181 639.8 723 50.2
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 1.4e-180 637.1 681 52.4
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 7.1e-180 634.8 727 50.8
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 9.2e-180 634.4 673 53.0
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.2e-179 634.0 727 50.6
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.1e-179 633.3 656 53.8
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 2.7e-179 632.9 724 49.2
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 7.8e-179 631.3 727 50.6
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 1.7e-178 630.2 936 42.8
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 6.6e-178 628.2 727 49.8
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 1.9e-177 626.7 676 53.0
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 7.3e-177 624.8 598 58.0
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 1.1e-175 620.9 680 51.2
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 2.4e-175 619.8 758 46.6
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 9.0e-175 617.8 680 50.9
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 1.2e-174 617.5 676 52.1
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 8.4e-173 611.3 716 48.7
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 1.1e-169 600.9 680 50.3
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.8e-167 593.6 722 47.5
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 2.4e-167 593.2 715 49.0
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.6e-166 589.7 670 49.9
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 1.1e-164 584.3 710 48.9
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 1.1e-164 584.3 709 48.2
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 2.1e-163 580.1 720 47.6
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 2.3e-162 576.6 662 48.8
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 3.0e-162 576.2 715 47.3
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.9e-161 573.5 714 47.3
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 1.9e-161 573.5 719 47.7
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 3.3e-161 572.8 652 49.2
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 4.3e-161 572.4 712 48.3
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.8e-160 569.7 662 47.1
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 1.4e-159 567.4 715 46.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 1.4e-159 567.4 716 46.9
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 1.2e-158 564.3 711 47.8
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.0e-158 563.5 662 46.7
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 3.4e-158 562.8 663 50.1
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 2.1e-155 553.5 672 50.1
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 2.1e-155 553.5 685 49.1
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 3.5e-155 552.7 667 47.2
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 9.6e-153 544.7 492 59.3
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 1.8e-151 540.4 641 47.3
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 5.3e-151 538.9 731 45.6
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 1.3e-141 507.7 635 45.8
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 1.7e-141 507.3 690 43.8
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 4.8e-136 489.2 571 48.9
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 6.3e-136 488.8 692 43.1
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 1.5e-129 467.6 667 42.0
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 1.7e-128 464.2 678 41.9
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 6.3e-128 462.2 530 49.4
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.7e-117 427.6 678 39.8
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 4.2e-116 422.9 723 37.6
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 4.5e-110 402.9 552 43.7
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 3.4e-81 307.0 433 45.7
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 2.4e-79 300.8 523 39.6
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 2.4e-66 257.7 303 51.5
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 9.6e-60 235.7 737 28.5
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.6e-59 235.0 631 28.2
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 6.9e-58 229.6 666 29.7
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.4e-42 177.9 162 55.6
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 7.4e-36 156.4 364 34.9
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.8e-32 144.1 224 42.4
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 6.5e-24 116.7 393 29.8
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 3.9e-21 107.5 169 39.1
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 2.5e-20 104.8 147 49.7
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 3.3e-20 104.4 57 82.5
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 1.7e-19 102.1 153 43.8
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 2.8e-19 101.3 87 55.2
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 6.7e-13 80.1 58 62.1
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 1.5e-12 79.0 195 33.3
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 2.0e-12 78.6 49 77.6
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 7.4e-12 76.6 98 44.9
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 7.0e-10 70.1 93 43.0
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.0e-09 68.6 48 72.9
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.3e-08 65.9 108 44.4
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.1e-07 62.8 37 78.4
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 7.2e-07 60.1 130 33.8


User provided reference genes

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