Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0077100 Salix brachista HOM05D002009 ORTHO05D006831 4.7e-97 357.8 177 100.0
Sabra11G0104600 Salix brachista HOM05D000080 ORTHO05D004954 3.7e-54 215.3 130 83.1
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 9.6e-42 174.1 151 62.3
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 3.4e-39 165.6 138 59.4
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 9.9e-39 164.1 151 59.6
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 7.1e-37 157.9 135 60.0
QL03p054350 Quercus lobata HOM05D003219 ORTHO05D005190 7.1e-37 157.9 137 59.9
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 1.5e-34 150.2 151 53.6
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 9.6e-34 147.5 163 49.7
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 2.8e-33 146.0 150 52.7
FAN05G0625 Fragaria x ananassa HOM05D002009 ORTHO05D006831 2.8e-33 146.0 127 57.5
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 2.8e-33 146.0 130 56.9
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 4.8e-33 145.2 134 53.0
Psat0s2197g0080 Pisum sativum HOM05D002009 ORTHO05D006831 6.2e-33 144.8 151 52.3
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 1.1e-32 144.1 151 51.0
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 1.8e-32 143.3 128 54.7
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 3.1e-32 142.5 184 44.6
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 3.1e-32 142.5 162 50.0
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 4.0e-32 142.1 163 46.6
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 5.3e-32 141.7 151 49.7
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 5.3e-32 141.7 189 43.9
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 5.3e-32 141.7 146 52.1
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 6.9e-32 141.4 182 44.5
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 9.0e-32 141.0 151 51.0
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 1.2e-31 140.6 163 47.2
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 1.5e-31 140.2 151 49.0
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 2.0e-31 139.8 179 44.1
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 3.4e-31 139.0 144 50.7
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 4.5e-31 138.7 151 51.0
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 4.5e-31 138.7 146 51.4
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 7.6e-31 137.9 157 47.8
TAR633G0909 Trochodendron aralioides HOM05D002009 ORTHO05D006831 7.6e-31 137.9 151 50.3
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 9.9e-31 137.5 139 51.8
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 1.3e-30 137.1 151 50.3
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 1.7e-30 136.7 157 47.1
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 1.7e-30 136.7 151 48.3
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 4.9e-30 135.2 157 45.9
Sabra04G0085200 Salix brachista HOM05D002009 ORTHO05D006831 4.9e-30 135.2 66 95.5
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 4.9e-30 135.2 127 54.3
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 8.4e-30 134.4 146 47.9
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 1.1e-29 134.0 146 47.9
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 2.4e-29 132.9 157 47.1
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 2.4e-29 132.9 154 46.8
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 3.2e-29 132.5 146 49.3
MD05G1053400 Malus domestica HOM05D002009 ORTHO05D006831 4.2e-29 132.1 141 46.8
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 5.4e-29 131.7 149 49.0
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 1.2e-28 130.6 146 48.6
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 1.6e-28 130.2 143 44.8
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 2.1e-28 129.8 146 49.3
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 3.5e-28 129.0 144 49.3
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 7.9e-28 127.9 153 49.7
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 1.0e-27 127.5 146 48.6
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 1.3e-27 127.1 152 46.1
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 1.8e-27 126.7 146 47.9
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 1.8e-27 126.7 146 47.9
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 1.8e-27 126.7 146 47.3
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 1.8e-27 126.7 152 44.7
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 2.3e-27 126.3 151 46.4
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 2.3e-27 126.3 146 46.6
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 2.3e-27 126.3 146 46.6
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 3.0e-27 125.9 147 46.9
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 3.0e-27 125.9 151 46.4
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 3.9e-27 125.6 157 42.7
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 1.1e-26 124.0 144 46.5
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 1.1e-26 124.0 160 43.1
Cpa.g.sc48.67 Carica papaya HOM05D002009 ORTHO05D006831 1.5e-26 123.6 102 63.7
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 1.9e-26 123.2 160 42.5
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 2.5e-26 122.9 147 45.6
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 3.3e-26 122.5 153 48.4
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 4.3e-26 122.1 154 47.4
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 1.3e-25 120.6 151 43.7
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 1.6e-25 120.2 146 44.5
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 1.6e-25 120.2 139 46.8
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 1.4e-24 117.1 158 43.7
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 1.3e-22 110.5 149 43.0
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 2.9e-22 109.4 194 35.6
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 1.9e-21 106.7 163 36.2
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 1.9e-21 106.7 142 40.1
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 2.5e-21 106.3 62 75.8
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 4.2e-21 105.5 138 42.0
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 7.1e-21 104.8 66 72.7
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 2.1e-20 103.2 63 73.0
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 6.7e-19 98.2 163 39.3
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 5.7e-18 95.1 63 65.1
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 5.7e-18 95.1 161 34.2
Sopen01g042760 Solanum pennellii HOM05D000208 ORTHO05D000130 7.4e-18 94.7 63 65.1
SMO146G0384 Selaginella moellendorffii HOM05D002009 ORTHO05D006831 2.4e-16 89.7 149 33.6
CBR_g26314 Chara braunii HOM05D002009 ORTHO05D006831 3.1e-16 89.4 147 33.3
EL10Ac4g09368 Beta vulgaris HOM05D002009 ORTHO05D006831 7.6e-15 84.7 56 60.7
Os07g0669000 Oryza sativa ssp. japonica HOM05D002009 ORTHO05D006831 1.7e-14 83.6 63 55.6
Atru.chr1.2931 Acer truncatum HOM05D002009 ORTHO05D006831 7.2e-13 78.2 92 46.7
Cre09.g387400 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D006831 3.5e-12 75.9 192 27.6
unitig_0.g2310 Utricularia gibba HOM05D002009 ORTHO05D006831 3.9e-11 72.4 91 42.9
Mapoly0082s0049 Marchantia polymorpha HOM05D002009 ORTHO05D006831 4.3e-10 68.9 62 48.4
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 3.7e-09 65.9 141 37.6
Sabra05G0106300 Salix brachista HOM05D000002 ORTHO05D000001 8.2e-09 64.7 49 65.3
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 1.2e-07 60.8 51 58.8
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 1.7e-06 57.0 27 85.2


User provided reference genes

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