Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 5.3e-213 745.0 684 100.0
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 2.8e-142 510.0 307 97.4
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 3.1e-141 506.5 302 98.7
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 6.2e-129 465.7 307 91.9
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 7.5e-119 432.2 665 82.3
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 4.6e-84 316.6 514 60.5
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 1.9e-82 311.2 302 68.5
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 8.1e-81 305.8 461 67.2
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 1.1e-80 305.4 481 65.3
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 2.2e-78 297.7 481 48.2
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 2.7e-76 290.8 259 76.1
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 3.5e-76 290.4 307 67.8
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.0e-75 288.9 468 60.7
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 1.8e-75 288.1 264 73.9
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 4.8e-73 280.0 304 65.8
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 2.6e-71 274.2 313 64.5
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 1.3e-70 271.9 264 71.2
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.3e-70 271.9 286 61.9
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 2.9e-70 270.8 480 61.7
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 6.5e-70 269.6 288 64.6
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 3.2e-69 267.3 290 59.3
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 7.2e-69 266.2 428 48.6
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 1.6e-68 265.0 310 62.6
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 6.1e-68 263.1 480 46.0
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 7.9e-68 262.7 287 64.1
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 7.9e-68 262.7 300 62.3
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.3e-67 261.9 298 58.4
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.8e-67 261.5 264 67.4
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.3e-67 261.2 259 69.1
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 3.0e-67 260.8 259 69.9
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 6.7e-67 259.6 307 59.6
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 6.7e-67 259.6 307 59.6
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 6.7e-67 259.6 276 65.2
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 3.3e-66 257.3 307 59.6
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 7.4e-66 256.1 459 39.2
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 9.7e-66 255.8 302 61.6
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 1.3e-65 255.4 309 59.9
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 2.2e-65 254.6 307 61.6
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 3.7e-65 253.8 317 61.5
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.8e-65 253.4 284 62.7
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.4e-64 251.9 474 49.8
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 5.3e-64 250.0 284 61.3
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 2.0e-63 248.1 476 47.5
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 3.4e-63 247.3 316 59.8
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 4.5e-63 246.9 290 60.7
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 5.9e-63 246.5 422 63.5
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 7.7e-63 246.1 475 60.8
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 2.9e-62 244.2 288 61.8
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 6.5e-62 243.0 249 69.9
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 8.5e-62 242.7 292 60.3
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 2.5e-61 241.1 386 53.4
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 2.5e-61 241.1 282 64.9
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 4.2e-61 240.4 304 58.2
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 7.2e-61 239.6 261 63.2
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 2.1e-60 238.0 485 60.0
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 7.9e-60 236.1 302 61.3
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 1.4e-59 235.3 388 67.8
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 3.0e-59 234.2 253 66.4
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 8.8e-59 232.6 386 59.1
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 3.3e-58 230.7 422 54.3
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 4.4e-58 230.3 306 56.9
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 1.3e-57 228.8 257 63.4
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 2.2e-57 228.0 259 63.3
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 3.1e-56 224.2 259 61.8
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 4.1e-56 223.8 470 41.1
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 5.3e-56 223.4 272 61.0
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 5.3e-56 223.4 296 58.1
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 5.3e-56 223.4 467 57.2
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 1.5e-55 221.9 272 60.3
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 1.5e-55 221.9 272 60.3
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 2.0e-55 221.5 259 62.2
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 3.4e-55 220.7 259 62.2
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 2.9e-54 217.6 316 54.1
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 5.0e-54 216.9 259 61.4
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.9e-53 214.9 272 59.9
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 2.5e-53 214.5 259 62.5
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 5.5e-53 213.4 295 55.6
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 9.4e-53 212.6 259 61.8
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 3.6e-52 210.7 390 63.8
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 2.0e-50 204.9 428 43.5
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 7.4e-50 203.0 237 61.6
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 2.0e-47 194.9 415 56.4
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 2.2e-46 191.4 457 56.0
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 7.2e-45 186.4 321 72.6
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 9.4e-45 186.0 230 63.0
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 1.2e-44 185.7 218 67.9
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 1.4e-43 182.2 327 71.3
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 3.3e-42 177.6 216 64.4
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 1.7e-41 175.3 216 65.3
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.4e-40 172.2 222 63.5
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 7.0e-40 169.9 168 54.2
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 1.2e-39 169.1 222 62.6
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.5e-37 161.4 157 51.0
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 1.8e-35 155.2 326 57.4
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 2.3e-35 154.8 328 52.4
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-35 154.1 327 56.6
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 3.4e-34 151.0 291 49.8
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 6.8e-27 126.7 131 57.3
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 1.7e-25 122.1 254 50.4
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.6e-20 105.5 234 64.1
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 6.4e-17 93.6 419 27.0
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 6.4e-17 93.6 414 24.6
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 3.2e-16 91.3 68 66.2
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 7.0e-16 90.1 237 45.6
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 3.3e-13 81.3 248 41.1
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 1.6e-12 79.0 205 29.8
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 3.6e-12 77.8 324 44.4
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 3.1e-11 74.7 189 31.7
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 3.4e-10 71.2 45 71.1
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.2e-09 68.6 59 61.0
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.2e-09 68.6 59 61.0
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 2.9e-09 68.2 138 33.3
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.0e-07 62.0 213 27.2
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 3.5e-07 61.2 76 47.4


User provided reference genes

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