Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0069100 Salix brachista HOM05D003349 ORTHO05D003898 2.8e-55 218.4 113 100.0
Sabra15G0069300 Salix brachista HOM05D003349 ORTHO05D003898 2.8e-55 218.4 113 100.0
Sabra15G0072800 Salix brachista HOM05D003349 ORTHO05D003898 2.8e-55 218.4 113 100.0
Sabra11G0092800 Salix brachista HOM05D001236 ORTHO05D001090 1.1e-38 163.3 96 90.6
Potri.019G033900 Populus trichocarpa HOM05D003349 ORTHO05D003898 2.9e-28 128.6 96 74.0
Sabra19G0041800 Salix brachista HOM05D003349 ORTHO05D003898 3.8e-28 128.3 96 74.0
Sabra11G0089600 Salix brachista HOM05D003349 ORTHO05D003898 7.3e-27 124.0 74 86.5
Potri.013G058700 Populus trichocarpa HOM05D003349 ORTHO05D003898 9.5e-27 123.6 77 87.0
Manes.08G150100 Manihot esculenta HOM05D003349 ORTHO05D003898 2.8e-26 122.1 96 70.8
Duzib128G1865 Durio zibethinus HOM05D003349 ORTHO05D003898 4.7e-26 121.3 96 70.8
Manes.09G142100 Manihot esculenta HOM05D003349 ORTHO05D003898 6.1e-26 120.9 96 69.8
Sabra13G0052200 Salix brachista HOM05D003349 ORTHO05D003898 8.0e-26 120.6 77 84.4
Prupe.7G003500 Prunus persica HOM05D003349 ORTHO05D003898 1.0e-25 120.2 70 87.1
Thecc.05G293700 Theobroma cacao HOM05D003349 ORTHO05D003898 1.0e-25 120.2 96 69.8
Cpa.g.sc51.107 Carica papaya HOM05D003349 ORTHO05D003898 1.4e-25 119.8 96 69.8
CiPaw.09G001500 Carya illinoinensis HOM05D003349 ORTHO05D003898 4.0e-25 118.2 70 87.1
Gohir.A11G259100 Gossypium hirsutum HOM05D003349 ORTHO05D003898 4.0e-25 118.2 96 68.8
Gohir.D11G269200 Gossypium hirsutum HOM05D003349 ORTHO05D003898 4.0e-25 118.2 96 68.8
Gorai.007G289100 Gossypium raimondii HOM05D003349 ORTHO05D003898 4.0e-25 118.2 96 68.8
PGR042G2987 Punica granatum HOM05D003349 ORTHO05D003898 4.0e-25 118.2 96 68.8
COL.COLO4_13609 Corchorus olitorius HOM05D003349 ORTHO05D003898 5.2e-25 117.9 96 68.8
Duzib177G0419 Durio zibethinus HOM05D003349 ORTHO05D003898 5.2e-25 117.9 96 68.8
CsaV3_4G013310 Cucumis sativus L. HOM05D003349 ORTHO05D003898 1.5e-24 116.3 96 65.6
Ciclev10019371m.g Citrus clementina HOM05D003349 ORTHO05D003898 2.0e-24 115.9 77 81.8
Sed0005648 Sechium edule HOM05D003349 ORTHO05D003898 2.0e-24 115.9 96 65.6
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 2.6e-24 115.5 98 65.3
Sed0027207 Sechium edule HOM05D003349 ORTHO05D003898 2.6e-24 115.5 96 64.6
CiPaw.06G089600 Carya illinoinensis HOM05D003349 ORTHO05D003898 3.4e-24 115.2 70 84.3
ClCG04G005280 Citrullus lanatus HOM05D003349 ORTHO05D003898 3.4e-24 115.2 96 64.6
MELO3C008798.2 Cucumis melo HOM05D003349 ORTHO05D003898 3.4e-24 115.2 96 64.6
arahy.Tifrunner.gnm1.ann1.GFD0T8 Arachis hypogaea HOM05D003349 ORTHO05D003898 4.4e-24 114.8 70 84.3
arahy.Tifrunner.gnm1.ann1.N26BUN Arachis hypogaea HOM05D003349 ORTHO05D003898 4.4e-24 114.8 70 84.3
Hma1.2p1_0376F.1_g139170 Hydrangea macrophylla HOM05D003349 ORTHO05D003898 9.8e-24 113.6 69 85.5
Atru.chr2.1365 Acer truncatum HOM05D003349 ORTHO05D003898 1.3e-23 113.2 96 66.7
Actinidia22087 Actinidia chinensis HOM05D003349 ORTHO05D003898 1.3e-23 113.2 69 85.5
Medtr6g032885 Medicago truncatula HOM05D003349 ORTHO05D003898 1.3e-23 113.2 98 64.3
THA.LOC104821510 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 1.3e-23 113.2 69 84.1
BcaB01g02049 Brassica carinata HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
BcaNung04050 Brassica carinata HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
A09p01870 Brassica napus HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
C09p01910 Brassica napus HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
BolC9t53126H Brassica oleracea HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
BraA09t35838Z Brassica rapa HOM05D003349 ORTHO05D003898 1.7e-23 112.8 96 64.6
Lalb_Chr02g0157061 Lupinus albus HOM05D003349 ORTHO05D003898 1.7e-23 112.8 70 84.3
BcaNung04049 Brassica carinata HOM05D003349 ORTHO05D003898 2.2e-23 112.5 69 82.6
TPR.G34626 Trifolium pratense HOM05D003349 ORTHO05D003898 2.2e-23 112.5 70 81.4
Medtr0495s0010 Medicago truncatula HOM05D003349 ORTHO05D003898 2.9e-23 112.1 70 81.4
Thhalv10028548m.g Eutrema salsugineum HOM05D003349 ORTHO05D003898 3.7e-23 111.7 96 64.6
Glyma.02G071700 Glycine max HOM05D003349 ORTHO05D003898 4.9e-23 111.3 70 81.4
Lj1A1137T83 Lonicera japonica HOM05D003349 ORTHO05D003898 4.9e-23 111.3 69 84.1
Rhsim03G0001200 Rhododendron simsii HOM05D003349 ORTHO05D003898 4.9e-23 111.3 69 84.1
Aa31LG2G1970 Aethionema arabicum HOM05D003349 ORTHO05D003898 6.4e-23 110.9 96 64.6
AL1G64640 Arabidopsis lyrata HOM05D003349 ORTHO05D003898 6.4e-23 110.9 96 64.6
AT1G54385 Arabidopsis thaliana HOM05D003349 ORTHO05D003898 6.4e-23 110.9 96 64.6
CANSAT78G1787 Cannabis sativa HOM05D003349 ORTHO05D003898 6.4e-23 110.9 70 82.9
CARHR055490 Cardamine hirsuta HOM05D003349 ORTHO05D003898 6.4e-23 110.9 96 64.6
Carub.0002s0958 Capsella rubella HOM05D003349 ORTHO05D003898 8.3e-23 110.5 96 64.6
Dinv37011 Davidia involucrata HOM05D003349 ORTHO05D003898 8.3e-23 110.5 69 84.1
PSO384G0567 Papaver somniferum HOM05D003349 ORTHO05D003898 8.3e-23 110.5 77 76.6
Sp6g02300 Schrenkiella parvula HOM05D003349 ORTHO05D003898 8.3e-23 110.5 96 63.5
Hund19241 Selenicereus undatus HOM05D003349 ORTHO05D003898 8.3e-23 110.5 77 79.2
Lj2g0007320 Lotus japonicus HOM05D003349 ORTHO05D003898 1.1e-22 110.2 70 81.4
Psat1g096120 Pisum sativum HOM05D003349 ORTHO05D003898 1.1e-22 110.2 98 63.3
FvH4_1g28060 Fragaria vesca HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 78.6
FAN19G0867 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 78.6
FAN23G0882 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 78.6
FAN26G3194 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 78.6
Glyma.16G152900 Glycine max HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 80.0
PSO339G2750 Papaver somniferum HOM05D003349 ORTHO05D003898 1.4e-22 109.8 77 76.6
QL07p020065 Quercus lobata HOM05D003349 ORTHO05D003898 1.4e-22 109.8 70 81.4
Ca_21768_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 1.8e-22 109.4 70 80.0
Eucgr.K01495 Eucalyptus grandis HOM05D003349 ORTHO05D003898 1.8e-22 109.4 96 63.5
Cpa.g.sc51.102 Carica papaya HOM05D003349 ORTHO05D003898 2.4e-22 109.0 101 66.3
Migut.J01894 Erythranthe guttata HOM05D003349 ORTHO05D003898 2.4e-22 109.0 69 82.6
Lalb_Chr06g0173961 Lupinus albus HOM05D003349 ORTHO05D003898 2.4e-22 109.0 70 78.6
Lsat_1_v5_gn_1_59620 Lactuca sativa HOM05D003349 ORTHO05D003898 3.2e-22 108.6 77 77.9
RcHm_v2.0_Chr3g0497191 Rosa chinensis HOM05D003349 ORTHO05D003898 3.2e-22 108.6 70 77.1
TWI60G1263 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 4.1e-22 108.2 96 64.6
Cc06_g22870 Coffea canephora HOM05D003349 ORTHO05D003898 5.4e-22 107.8 69 84.1
HanXRQChr09g0266371 Helianthus annuus HOM05D003349 ORTHO05D003898 5.4e-22 107.8 76 77.6
CDE07G0844 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 7.0e-22 107.5 69 79.7
vmacro12571 Vaccinium macrocarpon HOM05D003349 ORTHO05D003898 7.0e-22 107.5 69 81.2
CDE06G0484 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 9.2e-22 107.1 69 79.7
Lalb_Chr21g0317171 Lupinus albus HOM05D003349 ORTHO05D003898 1.2e-21 106.7 70 80.0
Oeu012406.1 Olea europaea HOM05D003349 ORTHO05D003898 1.2e-21 106.7 69 79.7
SalBow6G1268 Salvia bowleyana HOM05D003349 ORTHO05D003898 1.2e-21 106.7 69 81.2
SHI21767 Sapria himalayana HOM05D003349 ORTHO05D003898 1.2e-21 106.7 96 63.5
Ca_25618_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 1.6e-21 106.3 70 78.6
ECA285G0003 Erigeron canadensis HOM05D003349 ORTHO05D003898 1.6e-21 106.3 77 75.3
FvH4_5g28880 Fragaria vesca HOM05D003349 ORTHO05D003898 1.6e-21 106.3 70 77.1
FAN13G1757 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.6e-21 106.3 70 77.1
FAN18G3983 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.6e-21 106.3 70 77.1
TAR369G0075 Trochodendron aralioides HOM05D003349 ORTHO05D003898 1.6e-21 106.3 96 62.5
Sc19g0006470 Simmondsia chinensis HOM05D003349 ORTHO05D003898 2.0e-21 105.9 80 75.0
SGA_v2.0_scaffold118G32450 Striga asiatica HOM05D003349 ORTHO05D003898 2.0e-21 105.9 69 81.2
Lsat_1_v5_gn_2_57641 Lactuca sativa HOM05D003349 ORTHO05D003898 4.6e-21 104.8 77 72.7
Oeu060005.1 Olea europaea HOM05D003349 ORTHO05D003898 4.6e-21 104.8 69 78.3
MSTRG.19938 Avicennia marina HOM05D003349 ORTHO05D003898 5.9e-21 104.4 69 79.7
ECA238G0201 Erigeron canadensis HOM05D003349 ORTHO05D003898 5.9e-21 104.4 69 79.7
HanXRQChr01g0024711 Helianthus annuus HOM05D003349 ORTHO05D003898 5.9e-21 104.4 69 78.3
TAR623G1645 Trochodendron aralioides HOM05D003349 ORTHO05D003898 5.9e-21 104.4 77 72.7
TAR633G2041 Trochodendron aralioides HOM05D003349 ORTHO05D003898 5.9e-21 104.4 96 61.5
MD12G1003000 Malus domestica HOM05D003349 ORTHO05D003898 7.8e-21 104.0 70 78.6
PGSC0003DMG400008643 Solanum tuberosum HOM05D003349 ORTHO05D003898 7.8e-21 104.0 69 78.3
TAR636G3347 Trochodendron aralioides HOM05D003349 ORTHO05D003898 7.8e-21 104.0 77 74.0
EL10Ac3g06814 Beta vulgaris HOM05D003349 ORTHO05D003898 1.3e-20 103.2 69 76.8
CAN.G317.13 Capsicum annuum HOM05D003349 ORTHO05D003898 1.3e-20 103.2 69 76.8
Lj2A357T88 Lonicera japonica HOM05D003349 ORTHO05D003898 1.3e-20 103.2 69 81.2
Phvul.004G079400 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 1.3e-20 103.2 71 77.5
CANSAT56G0778 Cannabis sativa HOM05D003349 ORTHO05D003898 1.7e-20 102.8 69 73.9
Nitab4.5_0000001g0070 Nicotiana tabacum HOM05D003349 ORTHO05D003898 1.7e-20 102.8 69 76.8
SGA_v2.0_scaffold24G10518 Striga asiatica HOM05D003349 ORTHO05D003898 3.0e-20 102.1 69 76.8
TWI34G0012 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 3.0e-20 102.1 96 61.5
Peaxi162Scf00076g01031 Petunia axillaris HOM05D003349 ORTHO05D003898 5.0e-20 101.3 77 76.6
CSS0039180 Camellia sinensis var. sinensis HOM05D003349 ORTHO05D003898 8.6e-20 100.5 73 76.7
Sopen03g015010 Solanum pennellii HOM05D003349 ORTHO05D003898 1.1e-19 100.1 69 73.9
Aqoxy1G00500 Aquilegia oxysepala HOM05D003349 ORTHO05D003898 1.9e-19 99.4 69 76.8
Glyma.19G110600 Glycine max HOM05D003349 ORTHO05D003898 1.9e-19 99.4 70 77.1
unitig_899.g15643 Utricularia gibba HOM05D003349 ORTHO05D003898 1.9e-19 99.4 96 58.3
GSVIVG01033391001 Vitis vinifera HOM05D003349 ORTHO05D003898 3.3e-19 98.6 66 78.8
Nn2g15886 Nelumbo nucifera HOM05D003349 ORTHO05D003898 4.3e-19 98.2 95 61.1
AUR62032062 Chenopodium quinoa HOM05D003349 ORTHO05D003898 5.6e-19 97.8 69 76.8
HPP92_004178 Vanilla planifolia HOM05D003349 ORTHO05D003898 5.6e-19 97.8 96 57.3
ATR0697G133 Amborella trichopoda HOM05D003349 ORTHO05D003898 7.3e-19 97.4 69 72.5
DCAR_009680 Daucus carota HOM05D003349 ORTHO05D003898 9.5e-19 97.1 69 73.9
Glyma.16G041800 Glycine max HOM05D003349 ORTHO05D003898 1.2e-18 96.7 70 74.3
Os11g0580000 Oryza sativa ssp. japonica HOM05D003349 ORTHO05D003898 2.1e-18 95.9 70 74.3
DCAR_019880 Daucus carota HOM05D003349 ORTHO05D003898 2.8e-18 95.5 69 71.0
HanXRQChr16g0523881 Helianthus annuus HOM05D003349 ORTHO05D003898 2.8e-18 95.5 71 73.2
AUR62032685 Chenopodium quinoa HOM05D003349 ORTHO05D003898 3.6e-18 95.1 69 75.4
Nitab4.5_0002825g0010 Nicotiana tabacum HOM05D003349 ORTHO05D003898 6.2e-18 94.4 63 77.8
Zm00001eb200470 Zea mays HOM05D003349 ORTHO05D003898 6.2e-18 94.4 76 68.4
Nn4g24247 Nelumbo nucifera HOM05D003349 ORTHO05D003898 8.0e-18 94.0 88 59.1
VMungo1383G1871 Vigna mungo HOM05D003349 ORTHO05D003898 8.0e-18 94.0 70 71.4
Lj1g0027644 Lotus japonicus HOM05D003349 ORTHO05D003898 1.1e-17 93.6 70 71.4
Nn7g35824 Nelumbo nucifera HOM05D003349 ORTHO05D003898 1.8e-17 92.8 68 75.0
PGR142G2675 Punica granatum HOM05D003349 ORTHO05D003898 3.1e-17 92.0 70 67.1
Nn5g30180 Nelumbo nucifera HOM05D003349 ORTHO05D003898 4.0e-17 91.7 88 60.2
MD14G1002300 Malus domestica HOM05D003349 ORTHO05D003898 6.8e-17 90.9 50 90.0
Phvul.001G110000 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 3.4e-16 88.6 70 74.3
THA.LOC104820732 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 3.4e-16 88.6 95 49.5
arahy.Tifrunner.gnm1.ann1.L5U228 Arachis hypogaea HOM05D003349 ORTHO05D003898 9.8e-16 87.0 70 64.3
arahy.Tifrunner.gnm1.ann1.CJ7Z8Q Arachis hypogaea HOM05D003349 ORTHO05D003898 2.2e-15 85.9 70 64.3
Carub.0003s0322 Capsella rubella HOM05D003349 ORTHO05D003898 4.1e-14 81.6 93 49.5
Actinidia30557 Actinidia chinensis HOM05D003349 ORTHO05D003898 5.4e-14 81.3 49 85.7
BcaC05g30237 Brassica carinata HOM05D003349 ORTHO05D003898 7.0e-14 80.9 67 64.2
BcaC05g30298 Brassica carinata HOM05D003349 ORTHO05D003898 7.0e-14 80.9 67 64.2
Pp3c5_7300 Physcomitrium patens HOM05D003349 ORTHO05D003898 1.2e-13 80.1 69 62.3
Thhalv10022309m.g Eutrema salsugineum HOM05D003349 ORTHO05D003898 6.0e-13 77.8 67 62.7
THA.LOC104802863 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 6.0e-13 77.8 95 46.3
BraA05t23079Z Brassica rapa HOM05D003349 ORTHO05D003898 1.0e-12 77.0 67 62.7
AL3G13880 Arabidopsis lyrata HOM05D003349 ORTHO05D003898 1.3e-12 76.6 67 59.7
BcaC05g29887 Brassica carinata HOM05D003349 ORTHO05D003898 1.3e-12 76.6 67 61.2
BolC5t34961H Brassica oleracea HOM05D003349 ORTHO05D003898 1.3e-12 76.6 67 61.2
Solyc03g062700.4 Solanum lycopersicum HOM05D003349 ORTHO05D003898 1.3e-12 76.6 49 79.6
Sp3g02940 Schrenkiella parvula HOM05D003349 ORTHO05D003898 1.7e-12 76.3 67 61.2
A05p43390 Brassica napus HOM05D003349 ORTHO05D003898 3.0e-12 75.5 67 59.7
AT3G03970 Arabidopsis thaliana HOM05D003349 ORTHO05D003898 3.9e-12 75.1 67 58.2
C05p63090 Brassica napus HOM05D003349 ORTHO05D003898 3.9e-12 75.1 67 59.7
SEGI_12350 Sequoiadendron giganteum HOM05D003349 ORTHO05D003898 5.0e-12 74.7 69 58.0
BolC1t05779H Brassica oleracea HOM05D003349 ORTHO05D003898 8.6e-12 73.9 68 60.3
BolC1t05788H Brassica oleracea HOM05D003349 ORTHO05D003898 1.1e-11 73.6 99 47.5
BraA01t04546Z Brassica rapa HOM05D003349 ORTHO05D003898 1.5e-11 73.2 70 58.6
Mapoly0001s0286 Marchantia polymorpha HOM05D003349 ORTHO05D003898 1.5e-11 73.2 69 55.1
Sabra18G0055600 Salix brachista HOM05D003349 ORTHO05D350155 1.5e-11 73.2 53 71.7
A01p41230 Brassica napus HOM05D003349 ORTHO05D003898 4.3e-11 71.6 68 58.8
BNapus_Darmor_BZH_scaffold_78p00480 Brassica napus HOM05D003349 ORTHO05D003898 4.3e-11 71.6 68 58.8
CARHR078110 Cardamine hirsuta HOM05D003349 ORTHO05D003898 9.5e-11 70.5 66 57.6
Aa31LG5G14550 Aethionema arabicum HOM05D003349 ORTHO05D003898 1.6e-10 69.7 68 57.4
arahy.Tifrunner.gnm1.ann1.0MAW8U Arachis hypogaea HOM05D003349 ORTHO05D003898 1.6e-10 69.7 99 46.5
HanXRQChr03g0090421 Helianthus annuus HOM05D003349 ORTHO05D003898 2.1e-10 69.3 68 54.4
Sabra18G0055700 Salix brachista HOM05D003349 ORTHO05D350099 6.2e-10 67.8 50 72.0
BraA09t41584Z Brassica rapa HOM05D003349 ORTHO05D003898 8.1e-10 67.4 94 46.8
Pp3c22_2440 Physcomitrium patens HOM05D003349 ORTHO05D003898 1.1e-09 67.0 69 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2517 Anthoceros agrestis HOM05D003349 ORTHO05D003898 1.4e-09 66.6 70 51.4
Pp3c18_19210 Physcomitrium patens HOM05D003349 ORTHO05D003898 2.0e-08 62.8 92 39.1
Pp3c3_27710 Physcomitrium patens HOM05D003349 ORTHO05D003898 2.6e-08 62.4 69 46.4
SMO116G0096 Selaginella moellendorffii HOM05D003118 ORTHO05D003898 3.4e-08 62.0 71 46.5
Sc13g0002710 Simmondsia chinensis HOM05D003349 ORTHO05D003898 7.5e-08 60.8 49 63.3
Pp3c19_3520 Physcomitrium patens HOM05D003349 ORTHO05D003898 9.2e-06 53.9 69 40.6
Pp3c19_3524 Physcomitrium patens HOM05D003349 ORTHO05D003898 9.2e-06 53.9 69 40.6


User provided reference genes

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