Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.6e-112 408.7 200 100.0
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 3.8e-111 404.8 200 99.0
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 4.2e-110 401.4 200 98.5
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.5e-83 313.2 154 98.7
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 8.5e-79 297.4 155 93.5
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 3.7e-66 255.4 154 79.9
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.8e-58 229.2 150 70.7
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 4.1e-57 225.3 149 71.1
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-56 223.8 154 76.0
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 2.0e-56 223.0 150 69.3
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 5.9e-56 221.5 150 68.0
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 7.7e-56 221.1 149 68.5
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.0e-55 220.7 150 68.7
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.8e-55 218.8 146 67.8
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.8e-55 218.8 146 67.1
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 5.0e-55 218.4 149 68.5
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.5e-54 216.9 131 75.6
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 2.5e-54 216.1 151 68.2
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 3.2e-54 215.7 131 74.8
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 7.2e-54 214.5 131 74.0
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 9.4e-54 214.2 146 67.1
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 9.4e-54 214.2 149 68.5
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.2e-53 213.8 124 76.6
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 1.6e-53 213.4 146 68.5
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 3.6e-53 212.2 131 73.3
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.7e-53 211.8 130 72.3
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 6.1e-53 211.5 150 66.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 8.0e-53 211.1 152 65.8
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 8.0e-53 211.1 145 66.9
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.0e-52 210.7 130 71.5
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.4e-52 210.3 124 75.8
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 2.3e-52 209.5 124 73.4
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 2.3e-52 209.5 146 67.1
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 3.0e-52 209.1 146 65.8
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 4.0e-52 208.8 135 70.4
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 4.0e-52 208.8 124 74.2
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 5.2e-52 208.4 146 66.4
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 5.2e-52 208.4 126 78.6
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 8.8e-52 207.6 124 74.2
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 1.2e-51 207.2 127 73.2
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.2e-51 207.2 150 65.3
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 1.2e-51 207.2 130 71.5
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.5e-51 206.8 143 66.4
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.5e-51 206.8 131 71.8
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 2.6e-51 206.1 137 66.4
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.4e-51 205.7 127 70.1
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 3.4e-51 205.7 141 69.5
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 3.4e-51 205.7 128 72.7
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 4.4e-51 205.3 139 67.6
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 4.4e-51 205.3 146 67.1
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 5.7e-51 204.9 127 72.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.5e-51 204.5 143 67.1
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 9.8e-51 204.1 141 68.8
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 9.8e-51 204.1 149 68.5
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.3e-50 203.8 127 72.4
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.7e-50 203.4 127 71.7
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.7e-50 203.4 127 72.4
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.2e-50 203.0 132 68.2
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 2.2e-50 203.0 125 73.6
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 2.8e-50 202.6 127 71.7
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 4.8e-50 201.8 148 64.2
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 4.8e-50 201.8 147 68.0
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 6.3e-50 201.4 124 73.4
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 6.3e-50 201.4 133 68.4
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 8.3e-50 201.1 143 64.3
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.4e-49 200.3 142 66.9
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 1.8e-49 199.9 142 66.9
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 2.4e-49 199.5 136 66.2
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 4.1e-49 198.7 146 64.4
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 5.4e-49 198.4 124 71.8
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 9.1e-49 197.6 138 65.2
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.2e-48 197.2 126 69.8
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.0e-48 196.4 148 63.5
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 2.7e-48 196.1 146 61.0
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 2.7e-48 196.1 142 66.2
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 3.5e-48 195.7 127 71.7
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 1.0e-47 194.1 129 68.2
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.3e-47 193.7 126 64.3
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 2.3e-47 193.0 131 65.6
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 8.6e-47 191.0 148 62.8
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.1e-46 190.7 152 60.5
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-45 187.2 127 67.7
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 2.1e-45 186.4 129 65.1
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 8.0e-45 184.5 129 64.3
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.4e-44 183.7 124 67.7
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 4.0e-44 182.2 118 68.6
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 4.4e-43 178.7 124 63.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 5.7e-43 178.3 143 55.2
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.3e-42 177.2 144 57.6
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 1.7e-42 176.8 146 54.8
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.7e-42 175.6 106 73.6
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 4.9e-42 175.3 124 63.7
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 2.4e-41 172.9 146 52.7
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-40 170.6 126 64.3
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 1.6e-40 170.2 129 58.9
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.1e-38 164.1 132 60.6
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.0e-37 157.9 112 62.5
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 8.0e-37 157.9 110 70.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.8e-36 156.8 133 57.9
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.9e-36 154.5 121 62.0
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 3.4e-35 152.5 127 55.1
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.4e-33 146.4 145 47.6
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.3e-28 129.8 87 66.7
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 6.4e-26 121.7 64 84.4
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.1e-25 119.0 124 50.0
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 1.6e-24 117.1 83 68.7
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 4.6e-24 115.5 82 68.3
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.7e-18 97.1 150 38.7
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 7.3e-14 81.6 74 54.1
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 1.1e-12 77.8 79 55.7
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.9e-09 67.0 54 61.1
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.4e-09 65.5 54 59.3
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.3e-07 60.8 54 55.6
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.3e-07 60.8 54 55.6
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.7e-07 58.2 54 53.7


User provided reference genes

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