Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.5e-278 961.4 486 100.0
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.4e-255 885.9 491 91.2
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.3e-253 877.1 492 90.7
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.8e-192 675.6 489 69.7
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.1e-176 622.9 487 66.9
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 8.1e-176 620.9 496 65.9
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 7.1e-172 607.8 489 65.4
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 9.3e-172 607.4 464 67.2
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 7.9e-171 604.4 457 66.1
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 3.9e-170 602.1 495 63.8
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 5.1e-170 601.7 462 66.9
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 3.3e-169 599.0 430 70.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.4e-167 593.6 457 66.7
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 9.0e-167 590.9 437 67.5
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.3e-165 587.0 498 60.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.9e-165 585.9 498 60.4
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 4.9e-165 585.1 497 60.8
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.9e-164 583.2 497 61.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 7.1e-164 581.3 421 68.6
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.6e-163 580.1 474 61.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 2.1e-163 579.7 495 60.6
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 6.0e-163 578.2 492 61.6
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.9e-163 577.8 498 59.8
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.8e-162 576.6 555 57.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.3e-162 576.2 427 67.0
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.3e-161 572.4 494 60.9
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 9.0e-159 564.3 493 60.0
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.3e-157 560.5 488 60.2
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.3e-157 560.5 455 62.6
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 1.7e-157 560.1 432 64.4
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 3.8e-157 558.9 430 65.3
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 5.0e-157 558.5 439 64.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 8.5e-157 557.8 453 62.5
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 8.5e-157 557.8 442 64.3
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.4e-156 557.0 466 61.6
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.9e-156 556.6 454 60.6
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 4.2e-156 555.4 457 62.4
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 7.2e-156 554.7 418 66.3
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.6e-155 553.5 453 61.8
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.6e-155 553.5 456 62.3
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 3.6e-155 552.4 432 63.2
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.3e-154 550.4 424 63.0
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 3.9e-154 548.9 453 62.3
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 3.9e-154 548.9 442 62.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 5.1e-154 548.5 457 59.7
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.1e-154 548.5 513 57.3
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 5.1e-154 548.5 424 62.5
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 6.7e-154 548.1 460 61.1
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 4.3e-153 545.4 489 57.5
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 7.4e-153 544.7 422 64.7
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 9.7e-153 544.3 431 63.8
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.2e-152 543.1 439 63.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 4.8e-152 542.0 449 62.6
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.1e-151 540.8 424 61.6
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.8e-151 540.0 437 59.7
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 2.4e-151 539.7 494 55.9
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.4e-151 539.7 427 60.7
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.1e-151 539.3 424 64.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 5.3e-151 538.5 420 62.9
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 6.9e-151 538.1 481 58.4
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 9.1e-151 537.7 427 63.2
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.6e-150 536.2 427 63.0
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.4e-150 535.8 467 58.0
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 3.4e-150 535.8 424 62.5
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.0e-149 534.3 479 57.6
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.7e-149 533.5 493 58.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.0e-149 531.9 491 56.2
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.5e-149 531.2 420 62.4
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 8.5e-149 531.2 421 62.5
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.1e-148 530.8 424 61.1
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.5e-148 529.6 429 58.3
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.7e-147 526.2 429 58.7
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 3.9e-146 522.3 435 59.3
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.2e-144 516.5 402 63.9
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.8e-144 515.4 392 66.1
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 8.2e-144 514.6 421 58.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.5e-142 510.4 406 60.6
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 8.5e-141 504.6 362 67.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 3.2e-140 502.7 426 59.4
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 7.2e-140 501.5 462 56.7
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 2.2e-136 490.0 501 53.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.2e-136 490.0 405 61.0
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.8e-136 489.6 374 62.8
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 4.8e-136 488.8 371 63.3
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 7.0e-135 485.0 459 57.1
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 2.6e-134 483.0 434 54.8
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 5.0e-133 478.8 458 53.7
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.6e-131 472.6 421 57.0
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 5.7e-129 465.3 372 61.0
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 9.7e-129 464.5 421 55.1
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.0e-126 456.8 445 53.0
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.7e-123 446.4 480 50.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 8.0e-123 444.9 367 59.1
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 5.2e-122 442.2 386 60.4
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.6e-117 424.9 429 51.5
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.1e-107 392.1 431 49.2
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.0e-106 391.3 430 48.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.5e-100 370.2 436 45.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 4.0e-98 362.8 284 65.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 3.4e-97 359.8 432 43.1
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 2.3e-90 337.0 401 44.9
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.9e-87 327.4 304 52.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 6.6e-85 318.9 423 41.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.5e-84 317.0 221 69.2
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.6e-84 315.8 369 46.6
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 6.8e-82 308.9 261 62.5
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.1e-75 287.3 308 52.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 7.8e-70 268.9 206 68.4
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.8e-53 214.5 220 51.8
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.3e-51 208.4 458 34.1
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.2e-46 191.8 463 30.0
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 4.6e-38 163.3 164 52.4
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.2e-33 148.7 108 64.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.0e-32 145.6 103 67.0
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 5.5e-31 139.8 132 53.8
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.9e-29 133.7 93 63.4
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.6e-28 131.0 116 56.0
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 6.3e-27 126.3 135 54.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.2e-24 117.9 417 26.1
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 7.2e-23 112.8 80 70.0
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.1e-18 97.1 92 47.8
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.2e-12 79.0 55 74.5
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 9.7e-12 75.9 80 50.0
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.4e-10 72.0 69 46.4
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.9e-09 66.6 48 62.5
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 6.5e-08 63.2 67 52.2


User provided reference genes

Program Settings