Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 4.5e-175 617.8 317 100.0
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 6.1e-148 527.7 324 86.4
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 2.8e-116 422.5 323 74.3
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.3e-113 411.0 320 73.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.4e-112 408.3 320 73.8
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.7e-111 406.0 322 73.3
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.7e-111 406.0 323 72.8
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.3e-110 403.7 320 73.4
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 5.1e-110 401.7 327 69.4
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 1.5e-109 400.2 322 70.8
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 7.3e-109 397.9 268 80.2
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 9.5e-109 397.5 319 72.1
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 1.6e-108 396.7 319 72.1
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.1e-108 396.4 327 68.5
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.1e-108 396.4 325 70.2
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 2.8e-108 396.0 322 70.5
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 4.7e-108 395.2 322 71.1
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 4.7e-108 395.2 324 71.0
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 6.2e-108 394.8 270 79.3
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.0e-107 392.1 322 69.9
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 6.8e-107 391.3 272 78.7
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 8.9e-107 391.0 302 71.5
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 3.4e-106 389.0 323 68.7
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 9.9e-106 387.5 319 70.5
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.7e-105 386.7 326 69.0
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 2.2e-105 386.3 266 79.3
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 3.8e-105 385.6 319 69.0
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 3.8e-105 385.6 279 76.0
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 2.4e-104 382.9 322 67.4
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.4e-104 381.7 322 68.0
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 2.1e-103 379.8 319 68.3
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 2.7e-103 379.4 278 74.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 3.5e-103 379.0 266 76.7
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 4.6e-103 378.6 322 67.4
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 6.0e-103 378.3 287 73.2
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 3.9e-102 375.6 321 67.0
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.1e-102 375.2 322 67.1
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 5.1e-102 375.2 271 76.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.9e-101 373.2 263 76.4
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.5e-101 372.9 268 77.2
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 5.6e-101 371.7 324 67.6
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 7.3e-101 371.3 305 67.9
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 9.6e-101 370.9 267 76.0
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.6e-100 370.2 328 64.0
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.8e-100 369.4 324 66.4
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 3.6e-100 369.0 261 76.6
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 4.7e-100 368.6 261 76.2
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 4.7e-100 368.6 317 66.9
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 6.2e-100 368.2 322 66.5
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.4e-99 367.1 274 74.5
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.8e-99 366.7 276 73.2
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 1.8e-99 366.7 271 74.5
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.1e-99 365.9 322 65.5
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 3.1e-99 365.9 321 65.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 3.1e-99 365.9 321 65.4
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.0e-99 365.5 324 66.4
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 6.9e-99 364.8 323 65.6
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 8.9e-99 364.4 288 69.8
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.5e-98 363.6 251 76.9
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.5e-98 363.6 320 67.2
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 4.4e-98 362.1 267 73.8
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.4e-98 362.1 250 76.4
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.3e-97 360.5 271 71.2
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.1e-96 357.5 267 72.3
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 1.4e-96 357.1 268 72.4
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.6e-95 353.6 249 77.1
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 6.0e-95 351.7 271 70.5
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 1.0e-94 350.9 299 64.2
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.3e-94 349.7 249 76.3
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.5e-93 347.1 298 68.5
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 3.3e-93 345.9 262 72.9
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 9.6e-93 344.4 243 77.0
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 6.9e-91 338.2 266 72.2
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 6.9e-91 338.2 314 63.1
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 3.4e-90 335.9 271 69.0
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 6.4e-89 331.6 248 71.0
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 5.4e-88 328.6 309 62.1
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 9.3e-88 327.8 268 71.3
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 2.1e-87 326.6 259 72.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.7e-87 326.2 265 71.3
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.0e-86 324.3 309 61.8
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.3e-86 323.9 309 61.8
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 1.3e-86 323.9 224 79.5
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.3e-86 323.9 260 68.5
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 5.1e-86 322.0 317 60.9
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 6.7e-86 321.6 263 66.9
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 6.7e-86 321.6 263 66.9
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 8.7e-86 321.2 317 60.9
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.5e-85 320.5 309 60.5
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.5e-85 320.5 263 66.2
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 2.5e-85 319.7 317 60.6
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 3.3e-85 319.3 263 66.2
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 3.3e-85 319.3 263 66.2
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.3e-85 318.9 249 70.3
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 5.6e-85 318.5 263 66.5
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 5.6e-85 318.5 263 66.5
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.8e-84 316.2 256 64.8
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.1e-83 314.3 213 80.8
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.1e-83 312.8 225 75.1
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 4.5e-82 308.9 256 63.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.9e-80 303.5 213 76.5
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 2.4e-75 286.6 255 65.5
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 9.0e-75 284.6 254 61.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 7.1e-72 275.0 210 74.3
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.5e-69 266.5 308 56.5
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 4.3e-69 265.8 262 56.1
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 3.4e-66 256.1 264 56.1
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.7e-65 253.8 253 55.3
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 3.2e-64 249.6 187 74.9
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 4.1e-59 232.6 235 60.0
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.0e-58 230.3 254 53.5
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 5.1e-54 215.7 253 53.0
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.3e-53 213.0 139 80.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 8.8e-46 188.3 114 78.9
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 5.7e-45 185.7 297 42.8
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 2.5e-40 170.2 118 69.5
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 9.7e-37 158.3 121 69.4
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 1.3e-36 157.9 104 75.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.3e-28 129.0 77 84.4
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.0e-21 107.5 87 69.0
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 3.0e-14 83.6 86 55.8
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 8.3e-12 75.5 64 65.6
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 7.8e-10 68.9 46 71.7
Nn7g37440 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.1e-06 58.5 39 74.4


User provided reference genes

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