Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0038500 Salix brachista HOM05D001887 ORTHO05D003756 4.5e-149 531.2 256 100.0
Sabra14G0036400 Salix brachista HOM05D001887 ORTHO05D003756 2.2e-119 432.6 256 86.7
Potri.014G051300 Populus trichocarpa HOM05D001887 ORTHO05D003756 5.0e-84 315.1 351 52.7
Sabra02G0108700 Salix brachista HOM05D001887 ORTHO05D003756 1.8e-73 280.0 360 47.8
Potri.002G139600 Populus trichocarpa HOM05D001887 ORTHO05D003756 2.6e-64 249.6 306 48.0
TAR636G2628 Trochodendron aralioides HOM05D001887 ORTHO05D003756 2.8e-50 203.0 369 38.5
CiPaw.14G018400 Carya illinoinensis HOM05D001887 ORTHO05D003756 1.4e-49 200.7 351 36.5
Dinv43603 Davidia involucrata HOM05D001887 ORTHO05D003756 2.4e-49 199.9 333 39.3
Glyma.09G245200 Glycine max HOM05D001887 ORTHO05D003756 1.5e-48 197.2 341 35.8
Glyma.18G248100 Glycine max HOM05D001887 ORTHO05D003756 1.5e-48 197.2 342 36.8
Gohir.D09G191800 Gossypium hirsutum HOM05D001887 ORTHO05D003756 3.8e-47 192.6 354 37.3
Dinv25139 Davidia involucrata HOM05D001887 ORTHO05D003756 4.9e-47 192.2 357 35.3
CiPaw.12G056000 Carya illinoinensis HOM05D001887 ORTHO05D003756 1.1e-46 191.0 345 35.7
Gohir.A09G197200 Gossypium hirsutum HOM05D001887 ORTHO05D003756 1.1e-46 191.0 352 36.9
Gohir.A11G074800 Gossypium hirsutum HOM05D001887 ORTHO05D003756 1.4e-46 190.7 341 36.4
Lj1g0018104 Lotus japonicus HOM05D001887 ORTHO05D003756 1.4e-46 190.7 347 34.6
Lj8A278T25 Lonicera japonica HOM05D001887 ORTHO05D003756 1.9e-46 190.3 357 36.4
Gorai.006G214600 Gossypium raimondii HOM05D001887 ORTHO05D003756 2.4e-46 189.9 354 37.0
Thecc.01G400200 Theobroma cacao HOM05D001887 ORTHO05D003756 2.4e-46 189.9 345 35.7
QL04p028582 Quercus lobata HOM05D001887 ORTHO05D003756 3.2e-46 189.5 344 36.3
COL.COLO4_12375 Corchorus olitorius HOM05D001887 ORTHO05D003756 7.1e-46 188.3 342 36.0
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 7.1e-46 188.3 351 36.2
GSVIVG01018309001 Vitis vinifera HOM05D001887 ORTHO05D003756 9.3e-46 188.0 341 35.8
Ca_08045_v3 Cicer arietinum L. HOM05D001887 ORTHO05D003756 1.6e-45 187.2 337 35.0
CSS0038249 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D003756 2.7e-45 186.4 341 37.0
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 2.7e-45 186.4 351 36.5
MELO3C013896.2 Cucumis melo HOM05D001887 ORTHO05D003756 6.0e-45 185.3 354 35.0
Nn1g00743 Nelumbo nucifera HOM05D001887 ORTHO05D003756 6.0e-45 185.3 369 33.6
Duzib084G0537 Durio zibethinus HOM05D001887 ORTHO05D003756 1.0e-44 184.5 350 36.6
Manes.01G273400 Manihot esculenta HOM05D001887 ORTHO05D003756 1.0e-44 184.5 309 41.1
FAN08G2877 Fragaria x ananassa HOM05D001887 ORTHO05D003756 1.3e-44 184.1 364 34.6
CsaV3_3G002250 Cucumis sativus L. HOM05D001887 ORTHO05D003756 1.7e-44 183.7 354 34.7
FvH4_5g20480 Fragaria vesca HOM05D001887 ORTHO05D003756 1.7e-44 183.7 361 35.7
Nn6g33751 Nelumbo nucifera HOM05D001887 ORTHO05D003756 3.9e-44 182.6 367 33.5
Glyma.11G038700 Glycine max HOM05D001887 ORTHO05D003756 5.1e-44 182.2 344 35.8
FAN13G0539 Fragaria x ananassa HOM05D001887 ORTHO05D003756 1.1e-43 181.0 364 33.5
Duzib205G1673 Durio zibethinus HOM05D001887 ORTHO05D003756 1.5e-43 180.6 352 36.4
Thecc.03G239200 Theobroma cacao HOM05D001887 ORTHO05D003756 1.5e-43 180.6 356 34.8
FAN18G2460 Fragaria x ananassa HOM05D001887 ORTHO05D003756 2.5e-43 179.9 363 35.5
Gohir.A08G162600 Gossypium hirsutum HOM05D001887 ORTHO05D003756 3.3e-43 179.5 355 35.2
Gorai.004G191600 Gossypium raimondii HOM05D001887 ORTHO05D003756 3.3e-43 179.5 350 34.9
Gohir.D08G182600 Gossypium hirsutum HOM05D001887 ORTHO05D003756 4.3e-43 179.1 350 34.9
Sed0019172 Sechium edule HOM05D001887 ORTHO05D003756 4.3e-43 179.1 359 33.4
Actinidia02199 Actinidia chinensis HOM05D001887 ORTHO05D003756 5.6e-43 178.7 289 37.4
Prupe.5G054800 Prunus persica HOM05D001887 ORTHO05D003756 7.3e-43 178.3 353 34.3
Aqoxy7G00854 Aquilegia oxysepala HOM05D001887 ORTHO05D003756 9.6e-43 177.9 358 34.6
ClCG10G002160 Citrullus lanatus HOM05D001887 ORTHO05D003756 9.6e-43 177.9 354 34.7
Lalb_Chr01g0021681 Lupinus albus HOM05D001887 ORTHO05D003756 9.6e-43 177.9 356 32.9
Duzib138G1052 Durio zibethinus HOM05D001887 ORTHO05D003756 1.3e-42 177.6 342 34.8
Eucgr.E00348 Eucalyptus grandis HOM05D001887 ORTHO05D003756 1.3e-42 177.6 352 34.7
TWI59G0877 Tripterygium wilfordii HOM05D001887 ORTHO05D003756 1.3e-42 177.6 289 39.4
RcHm_v2.0_Chr7g0205801 Rosa chinensis HOM05D001887 ORTHO05D003756 1.6e-42 177.2 348 34.5
MD06G1046500 Malus domestica HOM05D001887 ORTHO05D003756 2.1e-42 176.8 360 35.6
ClCG05G003040 Citrullus lanatus HOM05D001887 ORTHO05D003756 3.6e-42 176.0 345 34.8
Glyma.01G204300 Glycine max HOM05D001887 ORTHO05D003756 3.6e-42 176.0 344 34.9
Hma1.2p1_0840F.1_g226690 Hydrangea macrophylla HOM05D001887 ORTHO05D003756 3.6e-42 176.0 358 34.6
Potri.001G150300 Populus trichocarpa HOM05D001887 ORTHO05D003756 3.6e-42 176.0 353 35.7
Prupe.2G121100 Prunus persica HOM05D001887 ORTHO05D003756 3.6e-42 176.0 352 34.1
QL12p008613 Quercus lobata HOM05D001887 ORTHO05D003756 3.6e-42 176.0 350 35.1
COL.COLO4_06684 Corchorus olitorius HOM05D001887 ORTHO05D003756 4.8e-42 175.6 356 34.3
PGR042G3895 Punica granatum HOM05D001887 ORTHO05D003756 4.8e-42 175.6 340 35.9
arahy.Tifrunner.gnm1.ann1.4V75MI Arachis hypogaea HOM05D001887 ORTHO05D003756 8.1e-42 174.9 351 34.8
Migut.F01957 Erythranthe guttata HOM05D001887 ORTHO05D003756 8.1e-42 174.9 367 31.6
PSO063G1476 Papaver somniferum HOM05D001887 ORTHO05D003756 1.8e-41 173.7 345 35.9
Ciclev10023925m.g Citrus clementina HOM05D001887 ORTHO05D003756 2.4e-41 173.3 344 33.4
arahy.Tifrunner.gnm1.ann1.5JK48S Arachis hypogaea HOM05D001887 ORTHO05D003756 3.1e-41 172.9 356 34.8
Phvul.008G049200 Phaseolus vulgaris HOM05D001887 ORTHO05D003756 3.1e-41 172.9 341 33.1
Manes.01G089800 Manihot esculenta HOM05D001887 ORTHO05D003756 4.0e-41 172.6 355 34.4
Lj2g0000600 Lotus japonicus HOM05D001887 ORTHO05D003756 5.3e-41 172.2 347 33.4
MD07G1097200 Malus domestica HOM05D001887 ORTHO05D003756 5.3e-41 172.2 339 35.7
VMungo1383G1774 Vigna mungo HOM05D001887 ORTHO05D003756 9.0e-41 171.4 338 33.1
VMungo1215G1416 Vigna mungo HOM05D001887 ORTHO05D003756 2.0e-40 170.2 344 34.0
Potri.003G083900 Populus trichocarpa HOM05D001887 ORTHO05D003756 2.6e-40 169.9 345 33.9
Sed0021992 Sechium edule HOM05D001887 ORTHO05D003756 2.6e-40 169.9 339 34.2
arahy.Tifrunner.gnm1.ann1.RES91D Arachis hypogaea HOM05D001887 ORTHO05D003756 4.5e-40 169.1 372 32.5
TPR.G25980 Trifolium pratense HOM05D001887 ORTHO05D003756 5.8e-40 168.7 346 32.1
CANSAT21G1847 Cannabis sativa HOM05D001887 ORTHO05D003756 7.6e-40 168.3 296 35.5
arahy.Tifrunner.gnm1.ann1.1W2FB9 Arachis hypogaea HOM05D001887 ORTHO05D003756 9.9e-40 167.9 342 32.7
arahy.Tifrunner.gnm1.ann1.XA2ZF2 Arachis hypogaea HOM05D001887 ORTHO05D003756 9.9e-40 167.9 342 32.7
FAN03G2304 Fragaria x ananassa HOM05D001887 ORTHO05D003756 9.9e-40 167.9 346 34.7
RcHm_v2.0_Chr1g0345271 Rosa chinensis HOM05D001887 ORTHO05D003756 9.9e-40 167.9 342 34.2
ATR0665G190 Amborella trichopoda HOM05D001887 ORTHO05D003756 1.3e-39 167.5 339 33.9
Ca_24615_v3 Cicer arietinum L. HOM05D001887 ORTHO05D003756 1.3e-39 167.5 347 33.4
TPR.G31434 Trifolium pratense HOM05D001887 ORTHO05D003756 1.3e-39 167.5 347 33.4
CsaV3_3G010660 Cucumis sativus L. HOM05D001887 ORTHO05D003756 1.7e-39 167.2 343 33.8
Gorai.007G085200 Gossypium raimondii HOM05D001887 ORTHO05D003756 2.9e-39 166.4 405 30.6
Phvul.002G002100 Phaseolus vulgaris HOM05D001887 ORTHO05D003756 2.9e-39 166.4 294 36.4
Atru.chr9.1199 Acer truncatum HOM05D001887 ORTHO05D003756 3.8e-39 166.0 345 34.8
Rhsim11G0061800 Rhododendron simsii HOM05D001887 ORTHO05D003756 4.9e-39 165.6 363 31.7
MSTRG.27485 Avicennia marina HOM05D001887 ORTHO05D003756 6.4e-39 165.2 358 32.1
SGA_v2.0_scaffold13G06381 Striga asiatica HOM05D001887 ORTHO05D003756 6.4e-39 165.2 350 32.3
MELO3C006285.2 Cucumis melo HOM05D001887 ORTHO05D003756 1.4e-38 164.1 353 33.1
Rhsim11G0063300 Rhododendron simsii HOM05D001887 ORTHO05D003756 1.4e-38 164.1 363 31.4
HanXRQChr17g0535581 Helianthus annuus HOM05D001887 ORTHO05D003756 1.9e-38 163.7 340 32.9
Nitab4.5_0004227g0020 Nicotiana tabacum HOM05D001887 ORTHO05D003756 1.9e-38 163.7 355 33.0
Lsat_1_v5_gn_3_15401 Lactuca sativa HOM05D001887 ORTHO05D003756 2.4e-38 163.3 339 32.2
Nitab4.5_0003335g0040 Nicotiana tabacum HOM05D001887 ORTHO05D003756 3.2e-38 162.9 355 33.0
Medtr7g081200 Medicago truncatula HOM05D001887 ORTHO05D003756 4.2e-38 162.5 339 31.6
Hund14476 Selenicereus undatus HOM05D001887 ORTHO05D003756 4.2e-38 162.5 275 36.4
FvH4_7g09211 Fragaria vesca HOM05D001887 ORTHO05D003756 7.1e-38 161.8 343 34.1
Oeu040671.1 Olea europaea HOM05D001887 ORTHO05D003756 7.1e-38 161.8 290 34.5
Psat3g099640 Pisum sativum HOM05D001887 ORTHO05D003756 7.1e-38 161.8 347 31.7
PGR031G0104 Punica granatum HOM05D001887 ORTHO05D003756 7.1e-38 161.8 329 32.8
ECA246G3991 Erigeron canadensis HOM05D001887 ORTHO05D003756 1.2e-37 161.0 280 35.4
Medtr5g013540 Medicago truncatula HOM05D001887 ORTHO05D003756 1.2e-37 161.0 344 33.4
TWI15G0766 Tripterygium wilfordii HOM05D001887 ORTHO05D003756 1.2e-37 161.0 352 31.5
Sabra01G0120100 Salix brachista HOM05D001887 ORTHO05D003756 1.6e-37 160.6 285 35.1
Lalb_Chr05g0214201 Lupinus albus HOM05D001887 ORTHO05D003756 2.1e-37 160.2 344 33.7
SalBow4G3207 Salvia bowleyana HOM05D001887 ORTHO05D003756 2.7e-37 159.8 356 32.0
THA.LOC104812738 Tarenaya hassleriana HOM05D001887 ORTHO05D003756 3.5e-37 159.5 343 32.7
CAN.G572.15 Capsicum annuum HOM05D001887 ORTHO05D003756 4.6e-37 159.1 341 32.8
Peaxi162Scf00301g00621 Petunia axillaris HOM05D001887 ORTHO05D003756 6.0e-37 158.7 339 32.7
SHI07802 Sapria himalayana HOM05D001887 ORTHO05D003756 7.9e-37 158.3 340 32.4
MBI04_g38562_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D003756 1.0e-36 157.9 302 34.1
Ah.07g199270 Amaranthus hybridus HOM05D001887 ORTHO05D003756 1.8e-36 157.1 262 36.6
Lalb_Chr09g0324121 Lupinus albus HOM05D001887 ORTHO05D003756 8.7e-36 154.8 345 32.8
Psat2g175640 Pisum sativum HOM05D001887 ORTHO05D003756 1.5e-35 154.1 297 33.3
MD07G1096900 Malus domestica HOM05D001887 ORTHO05D003756 1.9e-35 153.7 374 31.8
Aa31LG2G13180 Aethionema arabicum HOM05D001887 ORTHO05D003756 2.5e-35 153.3 282 35.1
AUR62007172 Chenopodium quinoa HOM05D001887 ORTHO05D003756 4.3e-35 152.5 291 34.4
Oeu017206.1 Olea europaea HOM05D001887 ORTHO05D003756 5.6e-35 152.1 310 31.3
BcaB04g18387 Brassica carinata HOM05D001887 ORTHO05D003756 7.4e-35 151.8 294 33.3
CANSAT25G0255 Cannabis sativa HOM05D001887 ORTHO05D003756 9.6e-35 151.4 348 31.6
AT4G17070 Arabidopsis thaliana HOM05D001887 ORTHO05D003756 1.6e-34 150.6 303 33.3
PGSC0003DMG400026213 Solanum tuberosum HOM05D001887 ORTHO05D003756 1.6e-34 150.6 288 34.0
Thhalv10025645m.g Eutrema salsugineum HOM05D001887 ORTHO05D003756 2.1e-34 150.2 354 31.1
AL7G37640 Arabidopsis lyrata HOM05D001887 ORTHO05D003756 3.7e-34 149.4 302 33.8
HanXRQChr01g0015991 Helianthus annuus HOM05D001887 ORTHO05D003756 3.7e-34 149.4 315 33.3
Sc01g0007950 Simmondsia chinensis HOM05D001887 ORTHO05D003756 6.2e-34 148.7 284 33.5
Sp7g17110 Schrenkiella parvula HOM05D001887 ORTHO05D003756 8.1e-34 148.3 345 31.9
Solyc08g077790.3 Solanum lycopersicum HOM05D001887 ORTHO05D003756 8.1e-34 148.3 362 30.9
BcaC07g38035 Brassica carinata HOM05D001887 ORTHO05D003756 1.1e-33 147.9 280 33.9
Oeu062966.1 Olea europaea HOM05D001887 ORTHO05D003756 1.4e-33 147.5 270 34.1
BolC8t48429H Brassica oleracea HOM05D001887 ORTHO05D003756 1.8e-33 147.1 280 33.9
CDE12G0256 Ceratophyllum demersum HOM05D001887 ORTHO05D003756 1.8e-33 147.1 303 32.3
Sed0012793 Sechium edule HOM05D001887 ORTHO05D003756 3.1e-33 146.4 340 32.1
MSTRG.9151 Avicennia marina HOM05D001887 ORTHO05D003756 4.0e-33 146.0 366 30.9
BcaNung00127 Brassica carinata HOM05D001887 ORTHO05D003756 5.3e-33 145.6 340 30.9
Carub.0007s2433 Capsella rubella HOM05D001887 ORTHO05D003756 5.3e-33 145.6 296 33.1
Sopen08g026300 Solanum pennellii HOM05D001887 ORTHO05D003756 1.2e-32 144.4 286 33.2
C01p25390 Brassica napus HOM05D001887 ORTHO05D003756 7.6e-32 141.7 277 33.2
BolC1t02490H Brassica oleracea HOM05D001887 ORTHO05D003756 1.3e-31 141.0 277 33.2
A01p20250 Brassica napus HOM05D001887 ORTHO05D003756 2.2e-31 140.2 277 32.9
Actinidia25913 Actinidia chinensis HOM05D001887 ORTHO05D003756 4.9e-31 139.0 288 33.7
GSVIVG01004825001 Vitis vinifera HOM05D001887 ORTHO05D003756 1.3e-28 131.0 184 43.5
AUR62018832 Chenopodium quinoa HOM05D001887 ORTHO05D003756 3.9e-28 129.4 352 28.7
Mapoly0034s0116 Marchantia polymorpha HOM05D001887 ORTHO05D003756 6.7e-28 128.6 339 28.9
SEGI_20203 Sequoiadendron giganteum HOM05D001887 ORTHO05D003756 5.6e-27 125.6 293 29.0
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 2.1e-26 123.6 179 41.9
Gohir.D11G079500 Gossypium hirsutum HOM05D001887 ORTHO05D003756 8.2e-26 121.7 249 34.9
Os03g0100300 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D003756 1.8e-25 120.6 336 27.4
SMO141G0008 Selaginella moellendorffii HOM05D001887 ORTHO05D003756 2.4e-25 120.2 266 30.8
vmacro00746 Vaccinium macrocarpon HOM05D001887 ORTHO05D003756 4.0e-25 119.4 215 34.4
Oeu040672.1 Olea europaea HOM05D002840 ORTHO05D003088 9.0e-25 118.2 166 39.8
Oeu040673.1 Olea europaea HOM05D002840 ORTHO05D003088 9.0e-25 118.2 166 39.8
unitig_46.g18602 Utricularia gibba HOM05D001887 ORTHO05D003756 2.0e-24 117.1 331 27.5
Lalb_Chr19g0126411 Lupinus albus HOM05D001887 ORTHO05D003756 2.6e-24 116.7 166 41.0
Cc08_g11220 Coffea canephora HOM05D001887 ORTHO05D003756 5.8e-24 115.5 177 39.0
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 2.2e-23 113.6 188 39.4
Ah.12g053960 Amaranthus hybridus HOM05D001887 ORTHO05D003756 6.5e-23 112.1 275 30.5
arahy.Tifrunner.gnm1.ann1.CW5K44 Arachis hypogaea HOM05D001887 ORTHO05D003756 2.5e-22 110.2 160 39.4
Pp3c9_3160 Physcomitrium patens HOM05D001887 ORTHO05D003756 5.5e-22 109.0 215 32.1
Zm00001eb404550 Zea mays HOM05D001887 ORTHO05D003756 9.3e-22 108.2 276 28.3
Atru.chr5.99 Acer truncatum HOM05D001887 ORTHO05D003756 2.1e-21 107.1 90 55.6
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 2.1e-21 107.1 236 35.2
HPP92_025743 Vanilla planifolia HOM05D001887 ORTHO05D003756 7.9e-21 105.1 187 37.4
CARHR223650 Cardamine hirsuta HOM05D001887 ORTHO05D003756 2.3e-20 103.6 170 38.8
BcaB04g18384 Brassica carinata HOM05D001887 ORTHO05D003756 5.1e-20 102.4 163 38.7
Hma1.2p1_3159F.1_g333400 Hydrangea macrophylla HOM05D001887 ORTHO05D003756 6.7e-20 102.1 156 41.7
Lalb_Chr19g0126401 Lupinus albus HOM05D001887 ORTHO05D003756 6.7e-20 102.1 108 48.1
Hund11502 Selenicereus undatus HOM05D001887 ORTHO05D003756 6.7e-20 102.1 319 29.8
Lj9A553T47 Lonicera japonica HOM05D001887 ORTHO05D003756 1.9e-19 100.5 92 54.3
A08p12850 Brassica napus HOM05D001887 ORTHO05D003756 9.7e-19 98.2 222 32.0
BraA08t33269Z Brassica rapa HOM05D001887 ORTHO05D003756 9.7e-19 98.2 222 32.0
Pp3c15_10740 Physcomitrium patens HOM05D001887 ORTHO05D003756 9.7e-19 98.2 199 32.2
DCAR_029498 Daucus carota HOM05D001887 ORTHO05D003756 1.0e-15 88.2 172 34.9
COL.COLO4_00166 Corchorus olitorius HOM05D001887 ORTHO05D003756 3.8e-15 86.3 112 43.8
Cpa.g.sc98.61 Carica papaya HOM05D001887 ORTHO05D003756 6.5e-15 85.5 114 41.2
DCAR_029501 Daucus carota HOM05D001887 ORTHO05D003756 9.4e-14 81.6 172 33.7
Hma1.2p1_3159F.1_g333390 Hydrangea macrophylla HOM05D001887 ORTHO05D003756 1.0e-12 78.2 51 60.8
QL04p028706 Quercus lobata HOM05D001887 ORTHO05D003756 5.1e-12 75.9 112 42.0
AagrBONN_evm.TU.Sc2ySwM_228.5648 Anthoceros agrestis HOM05D001887 ORTHO05D003756 2.5e-11 73.6 84 40.5
Glyma.17G148700 Glycine max HOM05D001887 ORTHO05D003756 3.3e-11 73.2 108 37.0
Cpa.g.sc98.64 Carica papaya HOM05D001887 ORTHO05D003756 5.7e-11 72.4 120 38.3
CBR_g470 Chara braunii HOM05D001887 ORTHO05D003756 5.5e-06 55.8 45 46.7
HPP92_025711 Vanilla planifolia HOM05D063056 ORTHO05D051550 7.2e-06 55.5 40 55.0


User provided reference genes

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