Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.6e-236 823.2 741 100.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 2.7e-178 629.8 476 96.0
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 3.0e-121 440.3 462 77.7
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 3.7e-111 406.8 459 74.3
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 5.3e-110 402.9 454 73.1
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.2e-109 401.7 471 72.8
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 4.5e-109 399.8 467 71.1
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 7.7e-109 399.1 452 74.1
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.0e-108 398.7 464 71.8
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 3.8e-108 396.7 456 71.1
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 5.5e-107 392.9 454 72.7
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 7.2e-107 392.5 452 73.2
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 2.3e-105 387.5 452 73.5
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 8.8e-105 385.6 451 74.1
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.5e-104 384.8 454 70.9
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.3e-104 383.6 455 71.2
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 4.1e-102 376.7 476 68.7
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.0e-101 374.4 454 70.7
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 7.7e-101 372.5 454 70.3
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.3e-100 371.7 454 70.7
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.3e-100 371.7 440 72.0
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 6.5e-100 369.4 454 70.0
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 6.5e-100 369.4 454 70.0
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 6.5e-100 369.4 455 71.0
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.9e-99 367.9 473 68.1
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 5.5e-99 366.3 437 72.8
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 2.1e-98 364.4 433 73.0
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 3.0e-97 360.5 455 70.1
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 2.0e-96 357.8 471 67.7
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 7.4e-96 355.9 454 69.6
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.7e-95 354.8 429 73.7
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 4.1e-94 350.1 470 67.4
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 4.1e-94 350.1 468 67.1
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 2.0e-93 347.8 439 70.6
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.6e-93 347.4 421 73.9
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 4.5e-93 346.7 474 66.0
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 2.9e-92 344.0 458 68.3
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 5.0e-92 343.2 455 67.9
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 5.0e-92 343.2 455 67.9
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 2.5e-91 340.9 449 69.5
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 4.2e-91 340.1 474 66.2
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.6e-90 338.2 457 69.8
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 2.1e-90 337.8 474 65.0
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 3.6e-90 337.0 446 69.5
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 6.1e-90 336.3 457 69.1
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.4e-89 335.1 456 54.8
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 5.7e-88 329.7 412 73.1
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 9.7e-88 328.9 453 66.7
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.3e-87 328.6 453 67.8
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 2.2e-87 327.8 459 66.2
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 2.8e-87 327.4 436 68.3
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.8e-87 327.4 422 61.8
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 3.7e-87 327.0 457 66.7
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 4.8e-87 326.6 418 71.1
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 6.3e-87 326.2 446 67.3
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 8.2e-87 325.9 437 68.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 2.4e-86 324.3 462 66.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 5.3e-86 323.2 441 67.6
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 9.1e-86 322.4 424 71.2
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 9.1e-86 322.4 433 69.3
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 3.8e-84 317.0 452 64.6
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 5.0e-84 316.6 453 66.7
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 5.0e-84 316.6 455 67.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 1.9e-83 314.7 410 51.0
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 2.5e-83 314.3 419 70.4
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.2e-83 313.9 419 70.2
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 5.5e-83 313.2 439 67.7
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 9.4e-83 312.4 403 73.2
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 9.4e-83 312.4 439 67.7
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 1.6e-82 311.6 437 68.0
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.2e-81 306.6 542 49.4
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 5.2e-81 306.6 460 67.4
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 8.8e-81 305.8 444 65.8
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.2e-80 305.4 444 65.5
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.6e-80 304.3 436 66.7
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 2.6e-80 304.3 399 73.2
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 9.8e-80 302.4 448 65.2
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 6.3e-79 299.7 457 63.2
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 9.1e-78 295.8 417 69.8
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 2.0e-77 294.7 400 69.8
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 9.5e-75 285.8 411 68.9
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.2e-74 285.4 410 68.8
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 1.5e-72 278.5 458 60.9
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 3.7e-71 273.9 465 61.1
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.2e-69 268.9 239 58.6
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 7.3e-67 259.6 408 66.7
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 6.4e-63 246.5 390 62.8
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.8e-58 231.1 229 55.0
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 7.0e-54 216.5 193 57.5
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 3.3e-43 181.0 409 59.2
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 2.8e-42 177.9 109 71.6
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.4e-41 174.9 110 74.5
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 4.6e-37 160.6 110 70.0
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.7e-36 158.7 132 57.6
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 5.1e-36 157.1 110 68.2
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 4.3e-35 154.1 93 76.3
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 5.6e-35 153.7 270 75.9
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 1.9e-30 138.7 112 62.5
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.7e-28 132.1 226 39.4
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 7.6e-24 116.7 75 69.3
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 3.2e-22 111.3 414 51.9
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.3e-20 105.9 66 72.7
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.6e-18 99.0 65 67.7
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.1e-17 96.3 61 70.5
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 5.3e-17 94.0 164 40.2
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 1.9e-06 58.9 145 26.9
TAR362G0754 Trochodendron aralioides HOM05D007552 ORTHO05D009397 2.5e-06 58.5 144 29.2


User provided reference genes

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