Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0082800 Salix brachista HOM05D005117 ORTHO05D005956 0.0e+00 1461.4 738 100.0
Potri.013G096600 Populus trichocarpa HOM05D005117 ORTHO05D005956 3.8e-310 1067.8 746 77.3
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 6.4e-257 891.0 745 64.7
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 9.6e-253 877.1 740 63.8
QL09p001419 Quercus lobata HOM05D005117 ORTHO05D005956 8.9e-251 870.5 752 62.0
Cpa.g.sc142.12 Carica papaya HOM05D005117 ORTHO05D005956 3.4e-250 868.6 740 62.4
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 2.2e-249 865.9 743 62.2
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 4.9e-249 864.8 745 62.6
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 7.8e-247 857.4 745 61.9
CSS0010464 Camellia sinensis var. sinensis HOM05D005117 ORTHO05D005956 1.3e-246 856.7 748 62.4
MD10G1002600 Malus domestica HOM05D005117 ORTHO05D005956 2.5e-245 852.4 744 60.8
COL.COLO4_25130 Corchorus olitorius HOM05D005117 ORTHO05D005956 3.3e-245 852.0 743 62.2
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 3.1e-243 845.5 747 60.8
FAN20G0498 Fragaria x ananassa HOM05D005117 ORTHO05D005956 6.4e-241 837.8 747 60.0
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 4.2e-240 835.1 745 60.4
Gohir.A08G230500 Gossypium hirsutum HOM05D005117 ORTHO05D005956 7.1e-240 834.3 743 61.2
Gohir.D08G250900 Gossypium hirsutum HOM05D005117 ORTHO05D005956 7.1e-240 834.3 743 61.1
Gorai.004G267600 Gossypium raimondii HOM05D005117 ORTHO05D005956 7.1e-240 834.3 743 61.1
RcHm_v2.0_Chr6g0250391 Rosa chinensis HOM05D005117 ORTHO05D005956 7.9e-239 830.9 745 59.6
FvH4_2g00430 Fragaria vesca HOM05D005117 ORTHO05D005956 1.5e-237 826.6 747 59.4
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 9.6e-237 823.9 745 59.5
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 2.8e-236 822.4 754 58.9
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 4.8e-236 821.6 736 60.7
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 1.1e-235 820.5 745 59.9
Ca_13614_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 6.9e-235 817.8 745 58.5
Psat7g227480 Pisum sativum HOM05D005117 ORTHO05D005956 1.5e-234 816.6 745 59.1
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 5.8e-234 814.7 744 59.5
ClCG11G008340 Citrullus lanatus HOM05D005117 ORTHO05D005956 7.6e-234 814.3 747 58.4
CANSAT21G1171 Cannabis sativa HOM05D005117 ORTHO05D005956 6.4e-233 811.2 739 59.4
Lj3g0005068 Lotus japonicus HOM05D005117 ORTHO05D005956 2.4e-232 809.3 746 59.2
Medtr4g030200 Medicago truncatula HOM05D005117 ORTHO05D005956 7.1e-232 807.7 743 59.2
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 4.6e-231 805.1 746 59.1
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 1.0e-230 803.9 747 57.7
TPR.G34118 Trifolium pratense HOM05D005117 ORTHO05D005956 1.8e-230 803.1 746 58.4
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 3.0e-230 802.4 746 58.8
Sed0010084 Sechium edule HOM05D005117 ORTHO05D005956 2.5e-229 799.3 747 57.2
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 9.6e-229 797.3 755 58.4
MBI06_g32153_MAGBIO Magnolia biondii HOM05D005117 ORTHO05D005956 1.8e-227 793.1 747 56.6
EL10Ac1g01281 Beta vulgaris HOM05D005117 ORTHO05D005956 1.0e-225 787.3 742 57.4
Rhsim12G0002100 Rhododendron simsii HOM05D005117 ORTHO05D005956 1.3e-225 786.9 822 54.9
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 4.9e-225 785.0 745 57.0
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 5.5e-224 781.6 747 56.9
Hund26940 Selenicereus undatus HOM05D005117 ORTHO05D005956 2.7e-223 779.2 735 58.0
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 1.0e-222 777.3 744 56.6
Migut.C01395 Erythranthe guttata HOM05D005117 ORTHO05D005956 3.0e-222 775.8 743 56.8
PSO017G2614 Papaver somniferum HOM05D005117 ORTHO05D005956 1.5e-221 773.5 743 56.0
PSO170G3068 Papaver somniferum HOM05D005117 ORTHO05D005956 1.9e-221 773.1 743 55.9
THA.LOC104810302 Tarenaya hassleriana HOM05D005117 ORTHO05D005956 2.5e-221 772.7 746 57.0
Nitab4.5_0000009g0430 Nicotiana tabacum HOM05D005117 ORTHO05D005956 1.6e-220 770.0 744 56.5
Thhalv10018306m.g Eutrema salsugineum HOM05D005117 ORTHO05D005956 2.1e-220 769.6 742 55.9
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 2.8e-220 769.2 745 56.5
Nitab4.5_0001489g0010 Nicotiana tabacum HOM05D005117 ORTHO05D005956 2.8e-220 769.2 745 56.4
Sopen11g020570 Solanum pennellii HOM05D005117 ORTHO05D005956 6.3e-220 768.1 743 56.8
Aqoxy5G01861 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 1.1e-219 767.3 744 55.2
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 1.4e-219 766.9 703 60.3
Solyc11g045120.3 Solanum lycopersicum HOM05D005117 ORTHO05D005956 6.9e-219 764.6 743 56.7
Aa31LG4G9190 Aethionema arabicum HOM05D005117 ORTHO05D005956 5.9e-218 761.5 738 55.8
PGSC0003DMG401019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 5.9e-218 761.5 744 56.6
Carub.0002s1821 Capsella rubella HOM05D005117 ORTHO05D005956 8.5e-217 757.7 742 55.0
AL2G31010 Arabidopsis lyrata HOM05D005117 ORTHO05D005956 1.9e-216 756.5 742 55.0
CARHR064630 Cardamine hirsuta HOM05D005117 ORTHO05D005956 1.9e-216 756.5 742 54.9
A07p37640 Brassica napus HOM05D005117 ORTHO05D005956 2.7e-215 752.7 742 55.1
BraA07t31328Z Brassica rapa HOM05D005117 ORTHO05D005956 4.6e-215 751.9 742 55.5
C06p45410 Brassica napus HOM05D005117 ORTHO05D005956 2.3e-214 749.6 742 55.3
Sp5g26520 Schrenkiella parvula HOM05D005117 ORTHO05D005956 3.0e-214 749.2 741 54.1
BcaC08g46567 Brassica carinata HOM05D005117 ORTHO05D005956 3.9e-214 748.8 742 55.0
BolC6t39599H Brassica oleracea HOM05D005117 ORTHO05D005956 8.7e-214 747.7 742 55.0
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 5.7e-213 745.0 726 55.6
AT1G71350 Arabidopsis thaliana HOM05D005117 ORTHO05D005956 7.4e-213 744.6 739 55.2
Eucgr.A01322 Eucalyptus grandis HOM05D005117 ORTHO05D005956 9.7e-213 744.2 693 56.6
Os02g0557600 Oryza sativa ssp. japonica HOM05D005117 ORTHO05D005956 2.8e-212 742.7 742 53.9
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 4.8e-212 741.9 701 57.6
BcaB03g14892 Brassica carinata HOM05D005117 ORTHO05D005956 8.2e-212 741.1 739 54.7
CAN.G75.10 Capsicum annuum HOM05D005117 ORTHO05D005956 1.4e-211 740.3 744 55.0
ECA247G0677 Erigeron canadensis HOM05D005117 ORTHO05D005956 1.8e-211 740.0 737 55.0
HanXRQChr12g0369271 Helianthus annuus HOM05D005117 ORTHO05D005956 3.1e-211 739.2 739 55.5
Ah.05g170440 Amaranthus hybridus HOM05D005117 ORTHO05D005956 2.2e-209 733.0 750 54.1
ATR1089G036 Amborella trichopoda HOM05D005117 ORTHO05D005956 1.0e-206 724.2 740 54.1
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 5.3e-203 711.8 749 51.3
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 1.5e-202 710.3 679 56.4
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 2.0e-202 709.9 749 51.1
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 1.7e-201 706.8 739 51.8
Peaxi162Scf00078g01021 Petunia axillaris HOM05D005117 ORTHO05D005956 8.5e-201 704.5 734 53.8
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 1.1e-200 704.1 722 54.2
Glyma.12G241600 Glycine max HOM05D005117 ORTHO05D005956 2.5e-200 703.0 678 56.9
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 3.0e-198 696.0 722 53.7
Prupe.8G004200 Prunus persica HOM05D005117 ORTHO05D005956 8.0e-183 644.8 632 56.8
CDE05G1166 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 3.7e-180 636.0 741 48.4
Aqoxy5G01859 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 2.5e-176 623.2 747 48.5
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 7.3e-168 595.1 751 46.9
vmacro00946 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 5.2e-166 589.0 785 47.3
unitig_37.g13073 Utricularia gibba HOM05D005117 ORTHO05D005956 1.7e-164 583.9 744 46.1
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 3.4e-149 533.1 808 39.6
SEGI_03298 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 1.4e-147 527.7 656 46.8
vmacro00947 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 6.6e-145 518.8 626 49.8
Atru.chr13.2570 Acer truncatum HOM05D005117 ORTHO05D005956 4.2e-131 473.0 518 53.3
Hma1.2p1_0016F.1_g010930 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 1.0e-129 468.4 488 54.3
TAR381G0825 Trochodendron aralioides HOM05D005117 ORTHO05D005956 1.5e-128 464.5 457 56.9
AagrBONN_evm.TU.Sc2ySwM_340.48 Anthoceros agrestis HOM05D005117 ORTHO05D005956 3.3e-128 463.4 631 43.4
RcHm_v2.0_Chr6g0249701 Rosa chinensis HOM05D005117 ORTHO05D005956 9.0e-126 455.3 490 52.2
Haze_13981 Corylus avellana HOM05D005117 ORTHO05D005956 3.5e-122 443.4 465 54.6
Haze_13982 Corylus avellana HOM05D005117 ORTHO05D005956 1.3e-111 408.3 257 78.2
Ca_30189_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 1.7e-108 397.9 257 75.1
SGA_v2.0_scaffold443G51687 Striga asiatica HOM05D005117 ORTHO05D005956 4.9e-108 396.4 319 63.9
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 2.7e-106 390.6 563 44.2
RcHm_v2.0_Chr6g0250211 Rosa chinensis HOM05D005117 ORTHO05D005956 1.0e-105 388.7 306 64.7
vmacro00948 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.1e-99 368.6 256 71.9
Atru.chr13.2543 Acer truncatum HOM05D005117 ORTHO05D005956 1.8e-97 361.3 244 73.0
PGSC0003DMG402019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 7.9e-90 335.9 232 70.7
Atru.chr13.2569 Acer truncatum HOM05D005117 ORTHO05D005956 3.8e-84 317.0 179 83.8
Cre06.g303650 Chlamydomonas reinhardtii HOM05D005117 ORTHO05D005956 1.1e-83 315.5 772 31.2
MCO13G430 Micromonas commoda HOM05D005117 ORTHO05D005956 7.5e-64 249.6 762 28.9
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 1.0e-52 212.6 165 65.5
RcHm_v2.0_Chr6g0249901 Rosa chinensis HOM05D005117 ORTHO05D005956 7.3e-51 206.5 306 44.1
Zm00001eb084470 Zea mays HOM05D005117 ORTHO05D005956 1.4e-49 202.2 159 62.9
RcHm_v2.0_Chr6g0250151 Rosa chinensis HOM05D005117 ORTHO05D005956 3.2e-46 191.0 112 81.2
RcHm_v2.0_Chr6g0250191 Rosa chinensis HOM05D005117 ORTHO05D005956 1.2e-45 189.1 347 39.2
RcHm_v2.0_Chr6g0250001 Rosa chinensis HOM05D005117 ORTHO05D005956 3.0e-44 184.5 109 78.9
FAN24G1044 Fragaria x ananassa HOM05D005117 ORTHO05D005956 1.5e-43 182.2 111 75.7
AUR62038541 Chenopodium quinoa HOM05D005117 ORTHO05D005956 2.5e-43 181.4 110 77.3
RcHm_v2.0_Chr6g0249891 Rosa chinensis HOM05D005117 ORTHO05D005956 3.3e-43 181.0 111 76.6
RcHm_v2.0_Chr6g0250171 Rosa chinensis HOM05D005117 ORTHO05D005956 2.3e-41 174.9 111 73.0
RcHm_v2.0_Chr6g0249861 Rosa chinensis HOM05D005117 ORTHO05D005956 6.8e-41 173.3 120 70.8
SHI04054 Sapria himalayana HOM05D005117 ORTHO05D005956 1.2e-34 152.5 104 67.3
FAN27G2074 Fragaria x ananassa HOM05D005117 ORTHO05D005956 3.4e-32 144.4 82 81.7
RcHm_v2.0_Chr6g0250321 Rosa chinensis HOM05D005117 ORTHO05D005956 7.5e-32 143.3 99 68.7
RcHm_v2.0_Chr6g0249761 Rosa chinensis HOM05D005117 ORTHO05D005956 1.2e-29 136.0 83 75.9
Rhsim03G0007800 Rhododendron simsii HOM05D000003 ORTHO05D005956 1.2e-24 119.4 134 50.0
A06p32710 Brassica napus HOM05D005117 ORTHO05D005956 8.4e-23 113.2 81 63.0
BraA06t26200Z Brassica rapa HOM05D005117 ORTHO05D005956 8.4e-23 113.2 81 63.0
RcHm_v2.0_Chr6g0249981 Rosa chinensis HOM05D005117 ORTHO05D005956 1.4e-22 112.5 69 76.8
RcHm_v2.0_Chr6g0249911 Rosa chinensis HOM05D005117 ORTHO05D005956 9.2e-22 109.8 71 70.4
Cfa026610 Carpinus fangiana HOM05D005117 ORTHO05D005956 1.6e-21 109.0 276 28.3
RcHm_v2.0_Chr6g0250221 Rosa chinensis HOM05D005117 ORTHO05D005956 2.1e-21 108.6 66 75.8
AagrBONN_evm.TU.Sc2ySwM_340.40 Anthoceros agrestis HOM05D005117 ORTHO05D005956 6.6e-20 103.6 83 56.6
RcHm_v2.0_Chr6g0249251 Rosa chinensis HOM05D005117 ORTHO05D005956 8.7e-20 103.2 212 36.3
RcHm_v2.0_Chr6g0249871 Rosa chinensis HOM05D005117 ORTHO05D005956 1.4e-17 95.9 55 72.7
RcHm_v2.0_Chr6g0249791 Rosa chinensis HOM05D005117 ORTHO05D005956 1.5e-16 92.4 55 78.2
CDE05G1587 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 5.8e-16 90.5 143 41.3
RcHm_v2.0_Chr6g0249991 Rosa chinensis HOM05D005117 ORTHO05D005956 5.4e-14 84.0 81 55.6
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 5.6e-11 73.9 169 29.0
Cc10_g13530 Coffea canephora HOM05D005117 ORTHO05D005956 2.8e-10 71.6 41 78.0
RcHm_v2.0_Chr6g0249241 Rosa chinensis HOM05D005117 ORTHO05D005956 4.8e-10 70.9 40 72.5
RcHm_v2.0_Chr6g0249851 Rosa chinensis HOM05D005117 ORTHO05D005956 4.8e-10 70.9 36 91.7
Rhsim09G0011400 Rhododendron simsii HOM05D005117 ORTHO05D005956 2.4e-09 68.6 50 64.0
SHI49642 Sapria himalayana HOM05D005117 ORTHO05D005956 5.3e-09 67.4 41 68.3
SEGI_33948 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 9.0e-09 66.6 45 73.3
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 1.2e-08 66.2 183 28.4
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 2.6e-08 65.1 183 26.8
SHI04055 Sapria himalayana HOM05D005117 ORTHO05D005956 3.4e-08 64.7 51 64.7
RcHm_v2.0_Chr6g0249261 Rosa chinensis HOM05D005117 ORTHO05D005956 8.4e-07 60.1 46 63.0


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