Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.7e-228 795.0 412 100.0
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 7.1e-213 743.8 412 93.9
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.3e-210 734.9 412 94.2
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 8.2e-161 570.9 414 72.5
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.0e-155 553.9 421 70.3
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 3.3e-154 548.9 417 71.5
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 2.0e-151 539.7 408 69.9
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.7e-148 529.3 414 70.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.0e-147 527.3 417 67.6
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.8e-147 526.6 413 68.8
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.8e-147 526.6 409 68.7
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 2.3e-147 526.2 412 67.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.3e-147 526.2 417 67.6
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.3e-147 526.2 417 67.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.0e-147 525.8 409 69.4
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.5e-146 523.5 396 69.4
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.5e-146 523.5 412 67.2
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 7.4e-146 521.2 411 70.1
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 9.7e-146 520.8 412 66.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 4.1e-144 515.4 414 65.9
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.2e-143 513.8 414 65.7
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.2e-143 513.8 406 66.7
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.5e-143 513.5 411 67.2
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 7.7e-143 511.1 415 67.0
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.2e-142 509.6 417 64.0
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.8e-142 508.8 417 64.0
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.9e-141 506.5 409 67.2
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.9e-141 506.5 412 64.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.2e-140 503.8 416 67.5
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.6e-140 503.4 405 65.9
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.6e-140 502.3 397 65.5
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.7e-140 501.9 409 67.0
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 6.1e-140 501.5 412 63.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 8.0e-140 501.1 409 65.8
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.3e-139 499.6 409 65.8
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 5.2e-139 498.4 411 63.3
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 7.5e-138 494.6 406 64.5
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 7.5e-138 494.6 407 65.6
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.4e-136 489.6 431 62.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.4e-136 489.6 416 62.5
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 7.0e-136 488.0 411 65.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.6e-135 486.1 407 62.7
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 2.6e-135 486.1 413 64.9
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 3.5e-135 485.7 404 64.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 4.5e-135 485.3 407 62.2
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 5.9e-135 485.0 415 62.2
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.3e-134 483.8 413 64.9
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 2.2e-134 483.0 420 64.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.9e-134 482.6 408 61.8
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.9e-134 482.6 374 69.8
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 5.0e-134 481.9 389 66.3
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.4e-131 473.8 407 63.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 2.6e-130 469.5 398 64.3
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 3.4e-130 469.2 401 63.1
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 4.4e-130 468.8 417 62.6
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 9.8e-130 467.6 410 61.0
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.7e-129 465.7 410 60.7
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.4e-128 463.8 408 59.8
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.6e-127 460.3 363 68.6
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 4.5e-127 458.8 400 62.0
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.9e-127 458.4 410 60.2
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 7.7e-127 458.0 405 60.5
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.9e-125 453.4 412 60.4
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 1.9e-125 453.4 336 69.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.2e-125 452.6 404 61.9
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.2e-125 452.2 398 60.6
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.4e-125 451.1 337 69.1
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 9.4e-125 451.1 442 57.5
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 8.0e-124 448.0 415 61.4
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 8.8e-123 444.5 312 74.0
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 8.8e-123 444.5 411 58.9
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 3.4e-122 442.6 364 63.5
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.2e-121 439.9 394 59.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 4.9e-121 438.7 385 61.3
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.1e-120 437.6 431 56.8
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.4e-120 435.3 403 60.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 3.5e-119 432.6 410 59.8
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 7.7e-119 431.4 428 55.8
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.2e-116 424.1 410 56.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.7e-116 422.2 422 56.6
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.0e-116 421.4 398 59.3
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.7e-113 413.7 410 56.6
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.1e-112 409.1 468 52.4
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.6e-111 407.1 356 63.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.9e-109 400.2 386 55.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.3e-109 399.4 408 55.1
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 8.0e-108 394.8 413 55.4
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.7e-102 377.1 360 58.1
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 6.2e-100 368.6 354 53.7
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.4e-96 356.7 331 60.4
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 2.1e-95 353.6 470 46.0
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.7e-94 350.5 338 58.9
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.0e-94 349.7 340 58.5
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.3e-93 345.1 299 63.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.2e-92 342.0 299 63.2
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.2e-92 342.0 299 63.2
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.2e-92 342.0 299 63.2
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.2e-92 342.0 285 66.0
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.6e-90 336.7 437 45.3
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 3.4e-90 336.3 326 53.7
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.7e-89 334.0 297 62.0
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.9e-89 332.4 358 53.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 8.4e-89 331.6 404 44.8
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 5.8e-82 308.9 219 74.0
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.9e-72 277.3 253 60.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 3.0e-70 270.0 213 66.7
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.9e-70 269.6 235 63.0
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 4.5e-50 203.0 587 29.0
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 9.4e-32 142.1 178 47.2
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-29 134.4 135 55.6
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 6.3e-28 129.4 209 39.2
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.1e-27 126.7 87 73.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.6e-23 113.6 163 41.1
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.3e-21 107.1 123 47.2
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 7.7e-10 69.3 47 70.2
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.8e-09 67.0 74 58.1
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.8e-09 67.0 74 58.1
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.8e-09 67.0 74 58.1
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 1.1e-08 65.5 59 55.9
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 5.2e-06 56.6 93 39.8


User provided reference genes

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