Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 6.0e-106 387.5 194 100.0
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 2.4e-94 349.0 197 91.4
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 9.1e-78 293.9 166 89.8
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 6.3e-63 244.6 173 76.3
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 3.1e-62 242.3 172 76.2
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 3.1e-62 242.3 172 76.2
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 7.7e-61 237.7 191 70.7
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 1.1e-59 233.8 175 72.6
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.5e-59 232.6 166 77.1
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 4.2e-59 231.9 176 71.6
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 7.2e-59 231.1 166 76.5
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 7.2e-59 231.1 166 76.5
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 1.2e-58 230.3 184 67.9
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 1.6e-58 229.9 167 74.9
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.1e-58 229.6 165 73.9
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.1e-58 229.6 171 74.3
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 2.7e-58 229.2 174 73.6
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 1.0e-57 227.3 166 74.1
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 1.4e-57 226.9 181 71.3
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 2.3e-57 226.1 176 69.9
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 2.3e-57 226.1 169 74.6
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 2.3e-57 226.1 179 69.8
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 3.0e-57 225.7 174 70.1
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 3.0e-57 225.7 182 68.1
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 5.2e-57 224.9 161 77.0
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 5.2e-57 224.9 169 74.6
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 5.2e-57 224.9 176 73.3
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 6.8e-57 224.6 165 75.8
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 8.8e-57 224.2 172 75.6
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 8.8e-57 224.2 173 69.9
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 5.7e-56 221.5 163 76.1
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 5.7e-56 221.5 173 71.7
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 7.5e-56 221.1 164 75.0
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 9.8e-56 220.7 162 72.8
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 1.3e-55 220.3 174 71.8
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 1.7e-55 219.9 175 70.3
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.7e-55 219.9 162 73.5
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 1.7e-55 219.9 169 72.8
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.2e-55 219.5 176 72.2
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 2.8e-55 219.2 167 71.9
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.8e-55 219.2 162 73.5
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 8.3e-55 217.6 170 72.4
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.8e-54 216.5 172 72.1
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 1.8e-54 216.5 173 71.7
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.1e-54 215.7 173 69.9
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 3.1e-54 215.7 184 65.8
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 4.1e-54 215.3 178 66.9
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 7.0e-54 214.5 184 64.7
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 9.2e-54 214.2 183 66.7
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 1.2e-53 213.8 177 68.4
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 1.2e-53 213.8 162 70.4
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 2.0e-53 213.0 172 68.6
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 2.7e-53 212.6 171 69.6
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 3.5e-53 212.2 176 71.0
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 3.5e-53 212.2 170 70.0
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 4.5e-53 211.8 187 64.7
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.5e-53 211.8 164 70.1
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 5.9e-53 211.5 170 68.8
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 5.9e-53 211.5 194 63.4
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 1.7e-52 209.9 175 68.0
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 1.7e-52 209.9 239 54.8
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 1.7e-52 209.9 173 69.4
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 2.9e-52 209.1 171 69.0
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 5.0e-52 208.4 190 64.2
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 5.0e-52 208.4 170 70.0
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 5.0e-52 208.4 170 70.0
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 6.6e-52 208.0 166 69.9
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 6.6e-52 208.0 163 68.7
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 1.1e-51 207.2 171 69.0
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 1.1e-51 207.2 139 78.4
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.9e-51 206.5 166 68.7
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 3.3e-51 205.7 173 67.1
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.3e-51 205.3 164 68.3
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.5e-51 204.1 158 70.9
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 1.2e-50 203.8 174 66.7
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 1.2e-50 203.8 171 64.3
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.6e-50 203.4 169 68.0
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 1.6e-50 203.4 154 72.1
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 2.1e-50 203.0 169 68.6
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 3.6e-50 202.2 178 65.7
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 4.7e-50 201.8 154 68.2
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 6.1e-50 201.4 173 65.3
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 1.4e-49 200.3 173 65.9
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 1.4e-49 200.3 139 76.3
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 2.3e-49 199.5 192 62.5
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 2.3e-49 199.5 189 60.8
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.3e-49 199.5 146 69.2
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 3.0e-49 199.1 180 64.4
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 3.0e-49 199.1 209 57.9
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.0e-49 198.7 169 66.3
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 4.0e-49 198.7 139 75.5
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 5.2e-49 198.4 175 66.3
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 5.2e-49 198.4 175 65.1
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 6.8e-49 198.0 139 76.3
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 8.9e-49 197.6 139 74.8
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 1.5e-48 196.8 126 81.0
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 1.5e-48 196.8 180 63.3
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 1.5e-48 196.8 176 64.8
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 1.5e-48 196.8 176 64.8
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 1.5e-48 196.8 176 64.8
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 2.6e-48 196.1 151 70.9
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 3.4e-48 195.7 211 55.0
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 3.4e-48 195.7 159 68.6
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 7.5e-48 194.5 165 66.1
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.2e-47 193.0 165 66.7
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 2.2e-47 193.0 103 93.2
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 2.9e-47 192.6 144 72.9
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 3.7e-47 192.2 169 63.3
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.9e-47 191.8 172 64.0
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.9e-47 191.8 172 64.0
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 1.8e-46 189.9 114 83.3
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.4e-46 189.5 159 66.7
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 2.4e-46 189.5 132 75.8
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 2.4e-46 189.5 132 75.8
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 1.2e-45 187.2 165 64.2
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.2e-45 187.2 162 66.7
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 1.6e-45 186.8 179 60.3
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 1.6e-45 186.8 165 64.8
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.0e-45 186.4 168 63.7
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 2.7e-45 186.0 122 78.7
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 4.6e-45 185.3 179 60.9
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 5.9e-45 184.9 180 60.6
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 1.7e-44 183.3 182 56.0
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 1.7e-44 183.3 177 62.7
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 3.9e-44 182.2 163 61.3
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 5.0e-44 181.8 153 64.1
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 6.6e-44 181.4 169 61.5
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 1.1e-43 180.6 200 56.0
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 1.9e-43 179.9 163 63.8
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 4.3e-43 178.7 103 86.4
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 5.6e-43 178.3 121 76.9
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 7.3e-43 177.9 152 68.4
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 1.6e-42 176.8 234 49.6
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 1.6e-42 176.8 175 60.0
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.1e-42 176.4 93 91.4
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 2.1e-42 176.4 143 68.5
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 6.2e-42 174.9 204 52.0
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.4e-41 173.7 94 87.2
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 4.0e-41 172.2 164 62.8
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.0e-40 169.9 163 59.5
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 1.3e-39 167.2 154 61.0
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 1.7e-39 166.8 176 58.0
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 8.3e-39 164.5 89 87.6
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 1.1e-38 164.1 98 78.6
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 2.4e-38 162.9 130 73.8
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 5.4e-38 161.8 312 40.7
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 1.6e-37 160.2 159 56.6
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 2.7e-37 159.5 142 66.9
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 7.8e-37 157.9 138 67.4
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 7.8e-37 157.9 154 58.4
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 3.9e-36 155.6 157 57.3
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 5.0e-36 155.2 94 77.7
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 1.2e-34 150.6 126 73.8
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 3.6e-34 149.1 98 72.4
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 4.7e-34 148.7 79 87.3
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 5.2e-33 145.2 143 65.0
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 5.2e-33 145.2 146 63.0
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 5.2e-33 145.2 146 63.0
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 1.3e-28 130.6 139 56.1
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 1.1e-27 127.5 71 78.9
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 1.1e-27 127.5 81 75.3
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 1.1e-27 127.5 81 75.3
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 2.3e-25 119.8 125 56.0
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.5e-24 117.1 81 75.3
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 2.2e-23 113.2 127 51.2
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 8.4e-23 111.3 117 60.7
Cc00_g16450 Coffea canephora HOM05D003677 ORTHO05D004231 3.2e-22 109.4 59 84.7
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 1.5e-19 100.5 60 73.3
Nitab4.5_0002478g0040 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.7e-18 95.5 74 67.6
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 5.2e-17 92.0 118 52.5
Haze_26142 Corylus avellana HOM05D003677 ORTHO05D004231 2.9e-15 86.3 109 45.9
Cre02.g088800 Chlamydomonas reinhardtii HOM05D003677 ORTHO05D004231 3.0e-12 76.3 52 57.7
CSS0031912 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 1.1e-11 74.3 35 94.3
CSS0033866 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 1.1e-11 74.3 35 94.3
MCO06G051 Micromonas commoda HOM05D003677 ORTHO05D004231 9.6e-11 71.2 160 33.1
C03p53720 Brassica napus HOM05D003677 ORTHO05D004231 8.1e-10 68.2 34 82.4
CARHR219880 Cardamine hirsuta HOM05D003677 ORTHO05D004231 1.8e-09 67.0 54 55.6
PRCOL_00001552 Prasinoderma coloniale HOM05D003677 ORTHO05D004231 1.9e-06 57.0 38 60.5


User provided reference genes

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