Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 2.4e-72 275.4 137 100.0
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.1e-58 229.9 122 92.6
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 4.3e-50 201.4 100 97.0
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 5.7e-50 201.1 102 95.1
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 2.2e-49 199.1 100 95.0
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 1.8e-48 196.1 100 93.0
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 3.1e-48 195.3 98 94.9
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 9.4e-45 183.7 125 75.2
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.3e-43 179.1 118 72.9
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.3e-42 174.9 130 68.5
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.3e-41 173.3 127 70.9
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 3.7e-41 171.8 120 72.5
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 6.3e-41 171.0 116 73.3
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 6.3e-41 171.0 127 70.9
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 6.3e-41 171.0 120 72.5
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.4e-40 169.9 120 69.2
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 1.8e-40 169.5 126 69.8
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 3.1e-40 168.7 121 70.2
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 5.3e-40 167.9 130 67.7
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 5.3e-40 167.9 120 70.0
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 9.1e-40 167.2 111 73.9
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 9.1e-40 167.2 84 95.2
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 9.1e-40 167.2 84 95.2
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.2e-39 166.8 121 69.4
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.5e-39 166.4 120 69.2
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.5e-39 166.4 116 71.6
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 2.0e-39 166.0 135 63.0
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 2.6e-39 165.6 129 69.0
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 2.6e-39 165.6 118 70.3
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 4.5e-39 164.9 120 68.3
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 5.9e-39 164.5 110 74.5
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 1.0e-38 163.7 110 74.5
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.0e-38 163.7 130 64.6
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.7e-38 162.9 124 66.9
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 2.2e-38 162.5 126 68.3
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 3.8e-38 161.8 124 65.3
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 5.0e-38 161.4 126 66.7
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 5.0e-38 161.4 126 67.5
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 6.5e-38 161.0 107 74.8
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 6.5e-38 161.0 121 65.3
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 1.1e-37 160.2 111 70.3
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 1.4e-37 159.8 126 65.9
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 1.9e-37 159.5 126 64.3
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 2.5e-37 159.1 99 76.8
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 2.5e-37 159.1 116 68.1
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.2e-37 158.7 134 65.7
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 4.2e-37 158.3 111 69.4
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 4.2e-37 158.3 123 65.9
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 5.5e-37 157.9 128 61.7
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.2e-37 157.5 134 64.9
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 9.4e-37 157.1 130 62.3
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 9.4e-37 157.1 116 66.4
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 9.4e-37 157.1 99 72.7
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.2e-36 156.8 116 65.5
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 1.2e-36 156.8 127 63.8
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.6e-36 156.4 122 64.8
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 3.6e-36 155.2 128 60.9
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.7e-36 154.8 108 72.2
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 4.7e-36 154.8 107 67.3
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 6.1e-36 154.5 116 67.2
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 6.1e-36 154.5 121 66.1
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 6.1e-36 154.5 121 66.1
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 7.9e-36 154.1 130 60.8
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 7.9e-36 154.1 128 63.3
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 7.9e-36 154.1 138 63.0
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.9e-36 154.1 134 64.9
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 7.9e-36 154.1 104 72.1
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 7.9e-36 154.1 119 61.3
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.4e-35 153.3 101 73.3
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 1.4e-35 153.3 113 66.4
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 1.4e-35 153.3 128 62.5
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 1.8e-35 152.9 131 60.3
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.8e-35 152.9 108 71.3
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.3e-35 152.5 116 67.2
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 2.3e-35 152.5 117 63.2
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 3.9e-35 151.8 130 60.8
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 3.9e-35 151.8 116 64.7
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 3.9e-35 151.8 116 64.7
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 3.9e-35 151.8 111 66.7
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 3.9e-35 151.8 107 67.3
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 3.9e-35 151.8 138 58.0
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 5.1e-35 151.4 101 72.3
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 5.1e-35 151.4 116 64.7
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 5.1e-35 151.4 116 64.7
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 6.7e-35 151.0 129 58.9
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 6.7e-35 151.0 130 60.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 6.7e-35 151.0 120 66.7
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 8.8e-35 150.6 110 69.1
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.1e-34 150.2 107 65.4
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.1e-34 150.2 110 67.3
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.1e-34 150.2 105 66.7
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-34 149.8 129 58.9
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-34 149.8 129 58.9
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-34 149.8 129 58.9
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 1.5e-34 149.8 107 70.1
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 2.0e-34 149.4 107 69.2
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 2.0e-34 149.4 124 63.7
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 2.0e-34 149.4 107 69.2
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 2.6e-34 149.1 120 63.3
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 3.3e-34 148.7 128 58.6
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 3.3e-34 148.7 128 58.6
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 3.3e-34 148.7 99 73.7
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 3.3e-34 148.7 127 62.2
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 5.7e-34 147.9 107 69.2
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 7.4e-34 147.5 115 63.5
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.7e-33 146.4 114 63.2
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.7e-33 146.4 108 63.9
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 3.7e-33 145.2 116 62.9
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 3.7e-33 145.2 116 62.9
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 4.8e-33 144.8 106 67.0
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 6.3e-33 144.4 115 62.6
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 6.3e-33 144.4 107 65.4
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.1e-32 143.7 107 65.4
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 2.4e-32 142.5 111 66.7
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 2.4e-32 142.5 107 63.6
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 3.1e-32 142.1 117 61.5
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.0e-31 139.4 106 66.0
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 2.0e-31 139.4 103 67.0
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 2.6e-31 139.0 102 69.6
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.7e-30 136.3 103 67.0
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 8.5e-30 134.0 112 61.6
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 1.9e-29 132.9 100 65.0
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.2e-28 130.2 122 56.6
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 2.7e-28 129.0 110 60.0
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.6e-26 122.5 99 58.6
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 4.4e-26 121.7 104 62.5
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.8e-25 119.0 102 57.8
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 1.1e-24 117.1 83 78.3
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 4.1e-24 115.2 104 48.1
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 5.9e-23 111.3 101 59.4
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 2.1e-20 102.8 111 46.8
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.0e-19 100.5 107 48.6
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 8.8e-19 97.4 133 39.8
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 2.8e-17 92.4 116 44.8
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 2.4e-16 89.4 71 66.2
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 5.3e-16 88.2 102 48.0
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 1.6e-15 86.7 50 76.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 4.0e-11 72.0 127 33.9
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 5.7e-10 68.2 38 84.2
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 3.5e-07 58.9 78 38.5


User provided reference genes

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