Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 2.3e-72 275.4 136 100.0
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 2.3e-72 275.4 136 100.0
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 1.2e-52 209.9 105 100.0
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.3e-43 179.9 91 96.7
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 2.8e-41 172.2 86 97.7
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 2.4e-40 169.1 85 95.3
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 5.3e-40 167.9 84 95.2
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 6.9e-40 167.5 84 95.2
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.3e-38 163.3 84 92.9
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 3.7e-33 145.2 82 82.9
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 8.2e-33 144.1 84 81.0
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 2.4e-32 142.5 84 81.0
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 6.9e-32 141.0 94 73.4
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 2.6e-31 139.0 84 79.8
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.4e-31 138.7 84 78.6
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 4.5e-31 138.3 85 75.3
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.0e-30 137.1 85 74.1
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 1.3e-30 136.7 88 75.0
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 2.2e-30 136.0 84 78.6
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 2.9e-30 135.6 85 74.1
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 3.8e-30 135.2 85 74.1
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.8e-30 135.2 84 78.6
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 4.9e-30 134.8 85 75.3
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 8.4e-30 134.0 85 76.5
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 8.4e-30 134.0 84 76.2
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 8.4e-30 134.0 94 69.1
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 3.2e-29 132.1 84 75.0
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 5.5e-29 131.3 84 77.4
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 7.1e-29 131.0 84 75.0
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 9.3e-29 130.6 85 74.1
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 3.5e-28 128.6 84 72.6
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 3.5e-28 128.6 83 72.3
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 4.6e-28 128.3 92 67.4
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 4.6e-28 128.3 84 71.4
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 6.0e-28 127.9 84 75.0
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.0e-27 127.1 84 71.4
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.0e-27 127.1 84 71.4
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 1.3e-27 126.7 83 71.1
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 1.3e-27 126.7 84 71.4
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 1.3e-27 126.7 82 69.5
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 1.8e-27 126.3 84 70.2
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.8e-27 126.3 84 70.2
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 2.3e-27 125.9 84 70.2
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 2.3e-27 125.9 84 70.2
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 2.3e-27 125.9 83 74.7
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.0e-27 125.6 85 70.6
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.0e-27 125.6 85 70.6
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 3.0e-27 125.6 83 72.3
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 3.9e-27 125.2 94 64.9
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 3.9e-27 125.2 85 74.1
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 5.1e-27 124.8 82 70.7
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 6.7e-27 124.4 85 68.2
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 6.7e-27 124.4 85 68.2
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 6.7e-27 124.4 85 68.2
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 6.7e-27 124.4 84 71.4
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 8.7e-27 124.0 92 64.1
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 8.7e-27 124.0 84 71.4
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 8.7e-27 124.0 85 68.2
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 70.2
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 69.0
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 69.0
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 69.0
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 69.0
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.1e-26 123.6 84 71.4
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.1e-26 123.6 95 62.1
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-26 123.2 84 69.0
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-26 123.2 84 69.0
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 1.5e-26 123.2 83 72.3
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 1.5e-26 123.2 85 69.4
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.9e-26 122.9 94 64.9
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 1.9e-26 122.9 84 67.9
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.9e-26 122.9 84 69.0
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 3.3e-26 122.1 84 69.0
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 3.3e-26 122.1 84 69.0
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 3.3e-26 122.1 84 69.0
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 3.3e-26 122.1 84 70.2
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 5.7e-26 121.3 96 62.5
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 5.7e-26 121.3 99 60.6
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 5.7e-26 121.3 84 72.6
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 5.7e-26 121.3 84 72.6
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 5.7e-26 121.3 83 71.1
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 7.4e-26 120.9 84 69.0
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 7.4e-26 120.9 86 68.6
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 7.4e-26 120.9 93 62.4
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.4e-26 120.9 85 69.4
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.4e-26 120.9 85 69.4
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 7.4e-26 120.9 84 69.0
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 7.4e-26 120.9 84 69.0
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 9.7e-26 120.6 84 67.9
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 1.3e-25 120.2 84 66.7
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 1.3e-25 120.2 85 68.2
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 1.3e-25 120.2 84 70.2
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 1.6e-25 119.8 94 60.6
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 2.2e-25 119.4 82 65.9
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 2.2e-25 119.4 82 65.9
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 2.8e-25 119.0 84 70.2
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.8e-25 119.0 85 68.2
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 2.8e-25 119.0 84 67.9
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 3.7e-25 118.6 86 66.3
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 4.8e-25 118.2 82 70.7
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 6.3e-25 117.9 96 61.5
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 6.3e-25 117.9 84 66.7
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 8.2e-25 117.5 88 68.2
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 1.1e-24 117.1 84 65.5
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 1.1e-24 117.1 84 69.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 1.1e-24 117.1 84 72.6
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 1.4e-24 116.7 92 60.9
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.8e-24 116.3 96 59.4
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.8e-24 116.3 84 66.7
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.4e-24 115.9 87 64.4
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 2.4e-24 115.9 94 59.6
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 2.4e-24 115.9 88 64.8
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 2.4e-24 115.9 88 64.8
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.1e-24 115.2 83 67.5
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 4.1e-24 115.2 63 93.7
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 5.3e-24 114.8 84 65.5
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.2e-23 113.6 94 58.5
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.2e-23 113.6 93 61.3
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 1.5e-23 113.2 101 57.4
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.5e-23 113.2 84 65.5
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 3.4e-23 112.1 84 67.9
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 8.5e-22 107.5 77 70.1
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 1.1e-21 107.1 83 63.9
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.2e-20 103.6 84 63.1
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 1.2e-20 103.6 83 59.0
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 2.1e-20 102.8 84 61.9
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.8e-19 99.8 84 59.5
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 1.5e-18 96.7 82 56.1
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 2.2e-17 92.8 85 47.1
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 6.3e-17 91.3 83 54.2
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.7e-14 83.2 87 47.1
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 2.9e-14 82.4 50 78.0
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 3.8e-14 82.0 88 45.5
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 2.7e-12 75.9 83 42.2
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 1.4e-11 73.6 87 47.1
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.8e-11 73.2 79 50.6
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 5.7e-10 68.2 38 84.2
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.9e-06 55.8 33 69.7


User provided reference genes

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