Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 3.4e-89 332.0 216 100.0
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 1.5e-52 210.3 105 100.0
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 1.5e-52 210.3 105 100.0
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 3.3e-52 209.1 106 96.2
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 8.9e-50 201.1 101 97.0
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 7.6e-49 198.0 100 95.0
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 1.7e-48 196.8 99 94.9
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 4.9e-48 195.3 100 93.0
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.6e-46 190.3 99 91.9
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 4.4e-41 172.2 97 83.5
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 4.9e-40 168.7 99 79.8
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 8.4e-40 167.9 99 80.8
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 1.1e-39 167.5 98 82.7
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 1.9e-39 166.8 99 79.8
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 2.1e-38 163.3 98 80.6
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 1.0e-37 161.0 98 78.6
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 2.3e-37 159.8 99 76.8
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 2.3e-37 159.8 100 74.0
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 2.3e-37 159.8 99 76.8
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.3e-37 159.8 99 77.8
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 5.1e-37 158.7 100 73.0
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 1.1e-36 157.5 99 75.8
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 1.5e-36 157.1 102 75.5
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.5e-36 157.1 100 73.0
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 1.5e-36 157.1 103 72.8
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.9e-36 156.8 99 77.8
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 3.3e-36 156.0 100 72.0
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 3.3e-36 156.0 99 74.7
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 4.3e-36 155.6 98 75.5
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 5.6e-36 155.2 97 72.2
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 7.3e-36 154.8 99 74.7
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 9.6e-36 154.5 99 76.8
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.3e-35 154.1 99 73.7
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.6e-35 153.7 98 72.4
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 1.6e-35 153.7 96 75.0
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 1.6e-35 153.7 99 75.8
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 1.6e-35 153.7 98 74.5
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 2.1e-35 153.3 99 73.7
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 2.8e-35 152.9 100 72.0
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 2.8e-35 152.9 100 73.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 2.8e-35 152.9 97 73.2
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 2.8e-35 152.9 97 74.2
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 3.6e-35 152.5 99 74.7
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 3.6e-35 152.5 103 69.9
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.8e-35 152.1 100 73.0
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 4.8e-35 152.1 100 73.0
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 6.2e-35 151.8 97 75.3
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 6.2e-35 151.8 100 76.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 6.2e-35 151.8 98 71.4
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 8.1e-35 151.4 100 71.0
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.1e-34 151.0 101 72.3
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 1.1e-34 151.0 104 70.2
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.1e-34 151.0 100 72.0
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 1.1e-34 151.0 97 75.3
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 2.4e-34 149.8 99 71.7
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 3.1e-34 149.4 99 70.7
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 9.0e-34 147.9 99 70.7
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 9.0e-34 147.9 99 70.7
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 9.0e-34 147.9 97 71.1
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.2e-33 147.5 101 71.3
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.2e-33 147.5 102 69.6
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.2e-33 147.5 100 72.0
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.2e-33 147.5 100 72.0
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 1.5e-33 147.1 97 73.2
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 2.0e-33 146.7 100 71.0
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 2.0e-33 146.7 100 70.0
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 3.4e-33 146.0 99 69.7
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 3.4e-33 146.0 101 69.3
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 3.4e-33 146.0 99 71.7
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 3.4e-33 146.0 100 68.0
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 4.5e-33 145.6 99 70.7
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.5e-33 145.6 100 71.0
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 4.5e-33 145.6 99 69.7
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 5.8e-33 145.2 99 69.7
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 5.8e-33 145.2 98 74.5
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 5.8e-33 145.2 98 74.5
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 7.6e-33 144.8 98 69.4
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.3e-32 144.1 100 68.0
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.7e-32 143.7 101 68.3
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 1.7e-32 143.7 99 68.7
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 1.7e-32 143.7 99 68.7
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 1.7e-32 143.7 98 70.4
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 2.2e-32 143.3 99 68.7
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.9e-32 142.9 97 71.1
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 2.9e-32 142.9 98 69.4
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 2.9e-32 142.9 98 69.4
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 2.9e-32 142.9 98 69.4
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 2.9e-32 142.9 99 69.7
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 2.9e-32 142.9 98 70.4
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 3.8e-32 142.5 98 69.4
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 3.8e-32 142.5 98 69.4
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 3.8e-32 142.5 97 71.1
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 3.8e-32 142.5 98 68.4
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 3.8e-32 142.5 98 69.4
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 3.8e-32 142.5 98 69.4
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 4.9e-32 142.1 98 68.4
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 6.4e-32 141.7 102 66.7
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 8.4e-32 141.4 98 69.4
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 8.4e-32 141.4 98 69.4
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 8.4e-32 141.4 98 69.4
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 8.4e-32 141.4 99 69.7
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 8.4e-32 141.4 101 67.3
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.1e-31 141.0 99 66.7
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-31 141.0 102 67.6
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-31 141.0 102 67.6
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.4e-31 140.6 98 68.4
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 1.9e-31 140.2 98 74.5
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 3.2e-31 139.4 102 64.7
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 3.2e-31 139.4 98 67.3
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 3.2e-31 139.4 102 69.6
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 4.2e-31 139.0 101 65.3
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 5.4e-31 138.7 96 66.7
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 5.4e-31 138.7 96 66.7
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 5.4e-31 138.7 102 65.7
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 7.1e-31 138.3 98 65.3
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.6e-30 137.1 97 68.0
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 2.7e-30 136.3 98 66.3
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 7.9e-30 134.8 96 68.8
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 7.9e-30 134.8 98 69.4
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.1e-28 131.0 98 66.3
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 1.9e-28 130.2 101 63.4
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.9e-28 130.2 101 64.4
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 2.1e-27 126.7 97 61.9
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 3.1e-26 122.9 102 60.8
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.5e-25 120.6 85 70.6
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.6e-25 119.8 100 58.0
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 4.9e-24 115.5 63 93.7
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 3.2e-23 112.8 101 55.4
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 2.1e-22 110.2 101 47.5
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 1.0e-21 107.8 77 70.1
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 4.8e-19 99.0 106 45.3
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.8e-18 97.1 106 46.2
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 5.8e-17 92.0 102 43.1
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 3.8e-16 89.4 106 46.2
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.7e-14 83.2 47 76.6
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 4.6e-14 82.4 50 78.0
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.8e-13 80.5 97 46.4
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 9.0e-10 68.2 38 84.2
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 1.3e-08 64.3 104 31.7
Sabra09G0098400 Salix brachista HOM05D000241 ORTHO05D003908 1.1e-07 61.2 57 100.0
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 2.1e-06 57.0 73 38.4


User provided reference genes

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