Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 7.0e-60 233.8 122 100.0
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 3.1e-55 218.4 119 95.8
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.4e-39 166.4 107 83.2
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 4.4e-38 161.4 114 78.9
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 6.0e-27 124.4 119 61.3
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 5.1e-26 121.3 121 59.5
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 6.2e-24 114.4 159 50.3
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 3.8e-21 105.1 115 56.5
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-20 103.6 72 76.4
Sabra06G0178600 Salix brachista HOM05D005631 ORTHO05D006765 4.2e-12 75.1 54 77.8
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 5.4e-12 74.7 39 94.9
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 7.1e-12 74.3 50 78.0
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 7.1e-12 74.3 50 78.0
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 3.5e-11 72.0 39 89.7
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 7.9e-11 70.9 60 68.3
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.0e-10 70.5 50 74.0
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 1.8e-10 69.7 38 89.5
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 2.3e-10 69.3 39 84.6
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.9e-09 66.2 69 50.7
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.9e-09 66.2 52 67.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 4.3e-09 65.1 50 68.0
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.6e-08 63.2 50 68.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 2.1e-08 62.8 60 56.7
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 2.8e-08 62.4 40 72.5
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 4.8e-08 61.6 60 53.3
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 4.8e-08 61.6 60 53.3
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 6.2e-08 61.2 50 66.0
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 6.2e-08 61.2 59 55.9
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 8.1e-08 60.8 60 53.3
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 8.1e-08 60.8 49 65.3
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 8.1e-08 60.8 60 58.3
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-07 60.5 60 55.0
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.1e-07 60.5 43 69.8
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 1.4e-07 60.1 60 53.3
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.4e-07 60.1 69 47.8
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.8e-07 59.7 63 54.0
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 2.4e-07 59.3 46 67.4
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 3.1e-07 58.9 60 53.3
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 3.1e-07 58.9 60 55.0
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.1e-07 58.9 56 57.1
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 3.1e-07 58.9 59 54.2
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 4.0e-07 58.5 54 59.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 5.3e-07 58.2 57 52.6
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 6.9e-07 57.8 56 57.1
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.9e-07 57.8 60 55.0
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.9e-07 57.8 60 55.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 6.9e-07 57.8 50 60.0
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 9.0e-07 57.4 50 60.0
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 9.0e-07 57.4 57 56.1
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 9.0e-07 57.4 51 62.7
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 9.0e-07 57.4 39 76.9
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.5e-06 56.6 51 64.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.5e-06 56.6 54 55.6
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 1.5e-06 56.6 61 52.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.0e-06 56.2 50 60.0
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.0e-06 56.2 50 60.0
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.0e-06 56.2 50 60.0
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 2.0e-06 56.2 70 50.0
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 2.0e-06 56.2 59 52.5
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 2.0e-06 56.2 50 56.0
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 2.6e-06 55.8 61 54.1
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 2.6e-06 55.8 58 51.7
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 2.6e-06 55.8 39 74.4
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.6e-06 55.8 69 47.8
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 3.4e-06 55.5 50 62.0
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 3.4e-06 55.5 62 53.2
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 3.4e-06 55.5 39 69.2
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 4.5e-06 55.1 39 71.8
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 4.5e-06 55.1 44 61.4
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.5e-06 55.1 71 46.5
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 4.5e-06 55.1 52 57.7
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.5e-06 55.1 50 58.0
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 4.5e-06 55.1 50 58.0
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 5.8e-06 54.7 60 50.0
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 7.6e-06 54.3 41 68.3
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 7.6e-06 54.3 50 60.0
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 1.0e-05 53.9 38 76.3
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 58.0
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 58.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 58.0
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 58.0
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 1.0e-05 53.9 70 42.9
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.0e-05 53.9 55 52.7
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 1.0e-05 53.9 38 73.7
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 1.0e-05 53.9 52 61.5
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.0e-05 53.9 50 58.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 60.0
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.0e-05 53.9 50 58.0


User provided reference genes

Program Settings