Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 0.0e+00 1119.4 594 100.0
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 1.7e-276 955.7 604 87.3
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 1.6e-210 736.5 636 67.3
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 1.2e-197 693.7 639 65.7
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.4e-193 679.5 634 62.9
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 4.9e-191 671.8 617 62.9
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.2e-190 669.1 542 68.1
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 2.1e-189 666.4 615 62.8
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 3.9e-188 662.1 618 62.0
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.3e-187 659.1 622 61.9
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 5.6e-187 658.3 648 60.2
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 7.3e-187 657.9 638 60.7
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 2.1e-186 656.4 625 61.4
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 8.1e-186 654.4 620 61.8
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.2e-184 650.6 630 61.6
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.4e-184 649.0 645 60.0
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 7.6e-184 647.9 622 61.1
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.2e-183 646.4 617 61.1
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 4.9e-183 645.2 629 62.2
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-182 644.0 543 66.5
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 9.3e-182 641.0 665 58.8
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.2e-181 640.6 638 59.7
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 3.5e-181 639.0 662 57.4
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 3.0e-180 636.0 623 58.1
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.1e-179 634.0 637 57.9
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 4.3e-179 632.1 628 61.0
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 9.6e-179 630.9 626 57.8
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 2.1e-178 629.8 628 58.1
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 6.2e-178 628.2 648 56.3
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 1.1e-177 627.5 702 54.0
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 1.1e-177 627.5 661 56.4
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.7e-175 620.2 628 57.5
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.9e-175 619.4 651 57.5
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 5.5e-174 615.1 655 55.1
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.1e-173 613.2 636 59.3
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 4.6e-173 612.1 639 58.8
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 3.9e-172 609.0 457 72.0
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 5.1e-172 608.6 665 56.7
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 5.6e-171 605.1 664 55.3
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 3.1e-169 599.4 668 54.9
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.1e-169 599.4 635 55.7
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 2.0e-168 596.7 671 55.4
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 5.8e-168 595.1 524 64.1
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 7.6e-168 594.7 500 63.8
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.6e-168 594.7 651 55.9
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.6e-168 594.7 655 55.9
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-167 594.0 526 62.4
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 1.7e-167 593.6 654 54.6
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 1.1e-166 590.9 642 55.0
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.1e-166 590.9 564 64.2
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 1.4e-166 590.5 631 56.7
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 4.2e-166 589.0 630 58.9
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 7.9e-165 584.7 618 58.3
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 3.9e-164 582.4 617 58.7
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 8.7e-164 581.3 661 54.5
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 8.7e-164 581.3 494 64.8
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 1.1e-163 580.9 646 54.5
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.1e-163 580.9 612 57.5
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.5e-163 580.5 642 55.9
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 3.3e-163 579.3 663 54.1
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 7.4e-163 578.2 419 72.3
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 6.3e-162 575.1 413 74.3
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 1.8e-161 573.5 655 55.3
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 5.3e-161 572.0 533 60.4
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 9.0e-161 571.2 660 54.1
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 2.0e-160 570.1 640 53.0
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 1.3e-159 567.4 473 66.2
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 2.2e-159 566.6 638 55.0
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 6.5e-159 565.1 590 58.8
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.5e-159 564.7 569 58.9
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.1e-158 564.3 643 53.0
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 1.6e-157 560.5 436 67.9
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 7.9e-157 558.1 618 53.6
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.9e-155 553.5 569 59.8
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 9.7e-155 551.2 520 59.2
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 3.4e-152 542.7 682 49.4
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 5.9e-152 542.0 615 52.5
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 2.5e-150 536.6 632 51.6
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 4.6e-149 532.3 499 59.9
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.8e-145 520.4 655 50.7
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 7.2e-142 508.4 451 60.8
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 1.0e-140 504.6 643 48.7
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.8e-140 503.8 475 59.6
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.3e-138 497.7 434 59.9
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 3.5e-136 489.6 630 50.2
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 5.9e-136 488.8 523 54.9
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 4.2e-134 482.6 630 48.7
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 2.1e-133 480.3 471 57.7
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.1e-129 468.0 495 54.1
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 7.7e-128 461.8 591 50.8
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 5.5e-126 455.7 462 56.3
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 8.8e-124 448.4 366 64.2
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.2e-122 443.7 486 53.3
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 8.8e-116 421.8 562 47.5
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 5.7e-115 419.1 584 45.5
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 2.8e-114 416.8 412 57.0
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 2.0e-112 410.6 464 52.8
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 6.1e-109 399.1 750 40.4
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 1.4e-108 397.9 453 48.8
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 5.2e-108 396.0 584 46.2
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 8.9e-108 395.2 370 60.3
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 3.4e-107 393.3 293 69.3
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 5.4e-105 386.0 470 45.7
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 3.9e-103 379.8 540 48.9
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.3e-98 364.8 472 50.0
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 3.0e-95 353.6 320 63.4
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 6.4e-90 335.9 562 42.5
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 3.1e-84 317.0 432 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 3.8e-82 310.1 346 50.0
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 5.4e-81 306.2 200 77.0
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 6.4e-74 282.7 281 57.7
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.9e-73 281.2 511 36.8
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 2.7e-72 277.3 410 49.5
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 6.0e-72 276.2 629 36.2
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 1.7e-71 274.6 407 45.7
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 2.4e-68 264.2 353 49.6
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 3.1e-68 263.8 296 53.0
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 4.0e-68 263.5 174 73.0
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 2.9e-66 257.3 169 74.0
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 7.1e-65 252.7 214 64.5
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 2.1e-64 251.1 539 39.5
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 1.4e-60 238.4 169 68.6
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 1.8e-60 238.0 349 42.1
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 5.3e-60 236.5 167 68.3
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.9e-55 220.3 329 47.1
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 3.5e-48 197.2 127 74.8
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.3e-47 195.3 164 64.0
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.3e-45 188.7 198 52.0
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-42 178.7 186 57.0
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 7.9e-40 169.5 192 54.7
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.9e-38 164.9 165 57.6
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.5e-38 164.5 142 66.9
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.7e-37 161.8 164 56.1
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 3.4e-35 154.1 149 56.4
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.2e-33 147.5 116 72.4
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 5.5e-33 146.7 279 35.5
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 9.4e-33 146.0 427 29.7
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 2.7e-32 144.4 239 39.3
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 2.7e-32 144.4 239 39.3
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.7e-32 144.4 128 67.2
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 4.5e-27 127.1 283 38.5
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 5.0e-26 123.6 86 70.9
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 6.1e-24 116.7 223 37.7
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 8.0e-24 116.3 322 26.7
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 9.7e-22 109.4 69 72.5
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 2.2e-21 108.2 108 60.2
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 5.3e-20 103.6 68 79.4
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-19 102.1 95 57.9
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.7e-19 99.8 89 60.7
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.7e-19 99.8 89 60.7
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 7.7e-19 99.8 89 60.7
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 7.7e-19 99.8 89 60.7
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 6.5e-18 96.7 82 63.4
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-17 95.9 80 65.0
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 3.2e-17 94.4 69 60.9
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.2e-16 92.4 54 81.5
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.6e-16 92.0 294 33.0
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 1.0e-15 89.4 115 45.2
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 6.7e-15 86.7 179 38.5
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 6.3e-13 80.1 52 73.1
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-12 79.3 48 85.4
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.9e-10 71.2 81 46.9
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 5.0e-10 70.5 52 69.2
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-09 69.3 48 62.5
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 1.9e-09 68.6 56 64.3
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 4.7e-08 63.9 93 44.1
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 3.0e-07 61.2 39 71.8
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 3.0e-07 61.2 36 75.0
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 4.0e-07 60.8 37 81.1
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.2e-07 60.5 230 35.2
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 6.8e-07 60.1 45 53.3
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 6.8e-07 60.1 45 53.3
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 8.8e-07 59.7 45 53.3


User provided reference genes

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