Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 1.1e-246 856.7 614 100.0
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 4.0e-228 795.0 614 87.3
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 2.3e-183 646.4 595 79.2
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 1.2e-160 570.9 595 81.5
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 2.0e-147 526.9 414 67.1
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 1.6e-120 437.6 619 61.6
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 1.8e-111 407.5 414 52.7
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 2.5e-105 387.1 615 58.7
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 9.5e-105 385.2 318 64.2
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 3.1e-103 380.2 410 57.1
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 1.2e-102 378.3 416 50.5
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 2.6e-102 377.1 615 58.9
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 1.7e-101 374.4 406 49.3
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 1.9e-100 370.9 418 54.1
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 2.4e-100 370.5 421 50.6
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 3.5e-99 366.7 618 55.3
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 3.3e-97 360.1 426 46.0
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 1.7e-93 347.8 432 46.8
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 3.7e-93 346.7 569 56.6
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 4.9e-93 346.3 418 45.7
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 8.3e-93 345.5 365 49.9
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 1.1e-92 345.1 428 45.6
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 1.9e-92 344.4 434 44.7
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 5.4e-92 342.8 419 46.1
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 1.6e-91 341.3 428 45.3
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 2.7e-91 340.5 426 43.7
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 1.0e-90 338.6 418 45.2
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 1.1e-89 335.1 420 46.0
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 2.5e-89 334.0 442 45.7
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 3.3e-89 333.6 421 44.7
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 4.3e-89 333.2 416 45.4
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 9.5e-89 332.0 631 53.4
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 6.2e-88 329.3 421 44.7
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 6.2e-88 329.3 419 45.1
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 6.2e-88 329.3 416 45.7
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 8.1e-88 328.9 417 45.8
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 1.1e-87 328.6 421 43.9
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 1.4e-87 328.2 417 43.6
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 1.2e-86 325.1 414 43.7
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 2.4e-84 317.4 430 44.0
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 2.4e-84 317.4 423 45.6
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 5.4e-84 316.2 322 53.1
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 7.1e-84 315.8 316 54.4
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 9.2e-84 315.5 423 45.9
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 3.5e-83 313.5 420 45.0
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 3.9e-82 310.1 416 44.0
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 3.9e-82 310.1 422 45.0
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 5.1e-82 309.7 430 40.2
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 4.0e-79 300.1 316 50.6
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 3.8e-77 293.5 371 41.8
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 4.9e-77 293.1 318 50.6
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 1.1e-76 292.0 316 50.6
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 4.2e-76 290.0 345 53.9
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 6.6e-74 282.7 351 44.7
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 3.3e-73 280.4 417 41.7
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 8.1e-72 275.8 435 49.0
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 3.1e-71 273.9 317 48.6
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 9.0e-71 272.3 304 49.0
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 2.0e-70 271.2 316 48.1
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 7.6e-70 269.2 622 49.8
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 1.7e-69 268.1 425 36.9
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 3.5e-67 260.4 368 47.3
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 4.6e-67 260.0 416 40.6
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 7.9e-67 259.2 414 40.1
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 1.0e-66 258.8 415 39.5
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 2.3e-66 257.7 360 41.1
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 2.8e-64 250.8 322 46.9
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 8.1e-64 249.2 419 38.2
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 8.1e-64 249.2 318 44.0
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 1.8e-63 248.1 268 48.5
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 3.1e-63 247.3 410 38.5
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 3.1e-63 247.3 410 38.5
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 5.3e-63 246.5 389 67.6
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 9.0e-63 245.7 204 59.8
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 1.5e-62 245.0 364 38.5
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 4.5e-62 243.4 409 37.9
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 5.8e-62 243.0 339 39.8
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 1.3e-61 241.9 364 38.2
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 2.2e-61 241.1 316 43.0
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 2.9e-61 240.7 319 39.8
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 3.2e-60 237.3 581 49.6
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 6.0e-59 233.0 316 42.1
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 1.8e-58 231.5 581 48.7
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 1.8e-58 231.5 568 47.0
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 6.7e-58 229.6 251 48.6
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 8.7e-58 229.2 390 63.1
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 3.3e-57 227.3 342 38.0
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 2.1e-56 224.6 365 37.3
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 3.1e-55 220.7 317 42.0
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 3.4e-54 217.2 568 44.0
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 2.2e-53 214.5 416 42.5
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 1.1e-44 185.7 332 45.8
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 1.8e-42 178.3 317 37.9
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 2.3e-42 177.9 192 50.0
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 3.1e-39 167.5 265 37.0
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 9.0e-39 166.0 318 35.2
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 1.6e-35 155.2 389 41.4
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 3.6e-35 154.1 419 30.5
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 9.1e-31 139.4 156 48.7
FAN22G2182 Fragaria x ananassa HOM05D007280 ORTHO05D009108 2.5e-20 104.8 71 69.0
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 2.2e-16 91.7 121 43.0
MBI03_g37600_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 5.3e-15 87.0 60 68.3
Atru.chr11.1056 Acer truncatum HOM05D007280 ORTHO05D009108 3.8e-13 80.9 59 71.2
SEGI_25718 Sequoiadendron giganteum HOM05D007280 ORTHO05D009108 7.2e-12 76.6 137 28.5
MBI03_g47433_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 6.8e-10 70.1 41 78.0
HanXRQChr04g0108241 Helianthus annuus HOM05D000001 ORTHO05D000003 5.9e-06 57.0 193 23.3


User provided reference genes

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