Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 7.2e-50 200.3 102 100.0
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.2e-17 93.2 73 72.6
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 2.8e-17 92.0 73 71.2
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.8e-17 92.0 70 75.7
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.6e-17 91.7 70 74.3
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 6.1e-17 90.9 69 75.4
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 8.0e-17 90.5 70 72.9
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.0e-16 90.1 73 71.2
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.4e-16 89.7 70 71.4
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.4e-16 89.7 70 71.4
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.8e-16 89.4 73 68.5
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.8e-16 89.4 73 68.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.8e-16 89.4 73 68.5
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.8e-16 89.4 70 71.4
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.8e-16 89.4 70 71.4
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.8e-16 89.4 70 72.9
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 2.3e-16 89.0 70 71.4
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.3e-16 89.0 70 71.4
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.3e-16 89.0 70 71.4
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 2.3e-16 89.0 70 71.4
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 2.3e-16 89.0 69 72.5
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 3.0e-16 88.6 70 70.0
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 3.0e-16 88.6 70 70.0
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 3.0e-16 88.6 70 70.0
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 3.0e-16 88.6 73 67.1
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.0e-16 88.6 69 72.5
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 3.0e-16 88.6 70 72.9
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 3.0e-16 88.6 73 67.1
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 4.0e-16 88.2 69 72.5
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 4.0e-16 88.2 73 69.9
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 4.0e-16 88.2 70 71.4
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 4.0e-16 88.2 68 75.0
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 5.2e-16 87.8 70 70.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.2e-16 87.8 70 70.0
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 5.2e-16 87.8 69 71.0
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 5.2e-16 87.8 73 65.8
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 5.2e-16 87.8 70 70.0
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 68.6
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 68.6
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 68.6
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 6.8e-16 87.4 73 65.8
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 6.8e-16 87.4 68 75.0
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 6.8e-16 87.4 69 71.0
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 71.4
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 70.0
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 6.8e-16 87.4 69 69.6
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 6.8e-16 87.4 70 68.6
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 8.9e-16 87.0 70 67.1
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 8.9e-16 87.0 96 55.2
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 1.2e-15 86.7 70 68.6
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.2e-15 86.7 69 71.0
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.2e-15 86.7 69 69.6
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.5e-15 86.3 69 71.0
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 2.0e-15 85.9 70 68.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 2.0e-15 85.9 70 68.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 2.0e-15 85.9 70 68.6
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.0e-15 85.9 70 71.4
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 2.0e-15 85.9 68 73.5
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.0e-15 85.9 69 69.6
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.0e-15 85.9 69 69.6
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.6e-15 85.5 70 67.1
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 3.4e-15 85.1 70 68.6
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.4e-15 84.7 70 67.1
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 4.4e-15 84.7 70 67.1
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 4.4e-15 84.7 70 67.1
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 7.5e-15 84.0 69 66.7
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 7.5e-15 84.0 70 67.1
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 69.6
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 68.1
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 69.6
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 68.1
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 68.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 9.8e-15 83.6 69 68.1
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 9.8e-15 83.6 96 53.1
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.3e-14 83.2 87 57.5
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.3e-14 83.2 70 65.7
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.3e-14 83.2 70 65.7
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.3e-14 83.2 69 65.2
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.3e-14 83.2 69 65.2
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.3e-14 83.2 69 66.7
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 1.7e-14 82.8 69 66.7
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.7e-14 82.8 68 69.1
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.7e-14 82.8 69 66.7
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.7e-14 82.8 83 54.2
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.2e-14 82.4 70 65.7
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 2.9e-14 82.0 69 69.6
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.9e-14 82.0 69 68.1
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 2.9e-14 82.0 69 68.1
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 2.9e-14 82.0 69 65.2
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 4.9e-14 81.3 69 63.8
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.3e-14 80.5 69 65.2
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 8.3e-14 80.5 73 60.3
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 8.3e-14 80.5 70 64.3
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.1e-13 80.1 73 60.3
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.8e-13 79.3 69 62.3
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 1.8e-13 79.3 73 60.3
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.8e-13 79.3 69 62.3
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.8e-13 79.3 73 58.9
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.2e-13 78.6 73 58.9
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.1e-13 78.2 69 62.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.1e-13 78.2 69 62.3
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 5.4e-13 77.8 70 60.0
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.4e-13 77.8 69 66.7
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 9.2e-13 77.0 60 71.7
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 9.2e-13 77.0 60 71.7
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 9.2e-13 77.0 60 71.7
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 9.2e-13 77.0 66 59.1
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 4.6e-12 74.7 83 45.8
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 7.8e-12 73.9 67 61.2
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.0e-11 73.6 71 53.5
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 5.6e-10 67.8 69 50.7
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 9.5e-10 67.0 69 53.6
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.2e-09 66.6 83 42.2
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 2.8e-09 65.5 83 45.8


User provided reference genes

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