Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.0e-148 530.0 264 100.0
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 6.1e-109 397.9 237 88.6
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 5.6e-70 268.5 232 66.8
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 4.7e-69 265.4 213 68.5
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.3e-68 263.1 208 70.7
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 1.3e-66 257.3 179 73.7
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 2.9e-66 256.1 169 77.5
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 3.7e-66 255.8 177 78.0
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 3.7e-66 255.8 177 78.0
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 8.3e-66 254.6 244 60.7
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.1e-65 254.2 177 77.4
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.9e-65 253.4 177 77.4
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 2.4e-65 253.1 220 65.0
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 2.4e-65 253.1 179 73.7
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 2.4e-65 253.1 180 73.3
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 3.2e-65 252.7 241 64.3
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 3.2e-65 252.7 245 62.4
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 4.1e-65 252.3 209 65.6
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 4.1e-65 252.3 246 62.6
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 4.1e-65 252.3 223 61.9
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 7.0e-65 251.5 182 74.2
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 9.2e-65 251.1 169 76.3
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.2e-64 250.8 224 62.9
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 1.2e-64 250.8 169 76.9
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 1.2e-64 250.8 169 75.1
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 1.6e-64 250.4 206 66.5
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.6e-64 250.4 176 75.0
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 2.0e-64 250.0 208 67.3
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 2.0e-64 250.0 224 62.5
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 2.7e-64 249.6 203 67.5
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 2.7e-64 249.6 230 63.5
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 3.5e-64 249.2 229 62.4
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 4.6e-64 248.8 166 77.7
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 6.0e-64 248.4 240 62.1
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 6.0e-64 248.4 228 62.7
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 6.0e-64 248.4 175 74.3
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 6.0e-64 248.4 211 63.0
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 6.0e-64 248.4 201 67.7
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 7.8e-64 248.1 215 64.7
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.0e-63 247.7 230 62.2
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 1.0e-63 247.7 187 71.1
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.0e-63 247.7 237 60.3
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 1.0e-63 247.7 179 71.5
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.3e-63 247.3 170 74.1
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 1.7e-63 246.9 240 61.7
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 1.7e-63 246.9 209 66.0
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 2.3e-63 246.5 171 73.7
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 2.3e-63 246.5 240 63.3
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 2.3e-63 246.5 230 62.6
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 3.0e-63 246.1 170 74.1
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 3.0e-63 246.1 189 69.3
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 3.0e-63 246.1 169 76.3
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 3.9e-63 245.7 229 62.4
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 3.9e-63 245.7 233 61.4
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 3.9e-63 245.7 211 64.5
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 6.6e-63 245.0 206 65.0
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 6.6e-63 245.0 179 70.9
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 6.6e-63 245.0 179 70.9
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 6.6e-63 245.0 179 70.9
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 8.6e-63 244.6 215 62.3
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 8.6e-63 244.6 207 66.2
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 8.6e-63 244.6 203 64.5
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.1e-62 244.2 166 75.3
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 1.1e-62 244.2 189 68.8
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 1.5e-62 243.8 239 62.3
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 1.9e-62 243.4 222 60.8
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.9e-62 243.4 175 71.4
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 1.9e-62 243.4 227 61.7
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 2.5e-62 243.0 234 59.4
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 2.5e-62 243.0 211 63.5
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 2.5e-62 243.0 171 74.3
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 4.3e-62 242.3 170 73.5
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 4.3e-62 242.3 214 65.0
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 4.3e-62 242.3 180 69.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 4.3e-62 242.3 246 56.9
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 5.6e-62 241.9 231 60.6
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 5.6e-62 241.9 177 72.3
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 7.3e-62 241.5 166 74.7
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 9.5e-62 241.1 169 74.0
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 9.5e-62 241.1 169 74.0
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 1.6e-61 240.4 228 60.5
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 1.6e-61 240.4 153 79.7
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 2.8e-61 239.6 236 59.3
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 3.6e-61 239.2 209 64.6
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 4.7e-61 238.8 221 60.2
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 4.7e-61 238.8 171 74.3
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 4.7e-61 238.8 172 73.3
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 4.7e-61 238.8 209 64.6
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 4.7e-61 238.8 169 73.4
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 6.2e-61 238.4 237 57.0
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 6.2e-61 238.4 205 64.9
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 6.2e-61 238.4 241 61.0
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 1.1e-60 237.7 237 59.9
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.4e-60 237.3 239 57.3
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 2.3e-60 236.5 228 59.6
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 4.0e-60 235.7 237 57.0
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 4.0e-60 235.7 237 57.0
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 4.0e-60 235.7 155 77.4
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 5.2e-60 235.3 169 71.6
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 5.2e-60 235.3 247 56.7
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 5.2e-60 235.3 207 63.8
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 8.9e-60 234.6 153 76.5
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 1.5e-59 233.8 229 57.2
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 2.6e-59 233.0 229 59.0
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 2.6e-59 233.0 238 58.8
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 2.6e-59 233.0 214 63.6
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.8e-59 231.9 240 56.2
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 7.5e-59 231.5 173 72.3
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 9.8e-59 231.1 169 72.2
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 9.8e-59 231.1 230 56.5
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 9.8e-59 231.1 175 69.7
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 1.3e-58 230.7 176 68.2
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 1.1e-57 227.6 169 70.4
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 2.4e-57 226.5 175 66.9
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 5.4e-57 225.3 197 62.4
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 7.1e-57 224.9 161 69.6
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 1.3e-55 220.7 170 65.9
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 5.1e-55 218.8 175 66.3
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 1.1e-54 217.6 154 69.5
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 1.5e-54 217.2 153 71.2
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 3.3e-54 216.1 153 71.9
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.6e-54 215.3 260 50.8
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 3.6e-53 212.6 179 63.7
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.4e-52 210.7 169 68.0
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 4.0e-52 209.1 199 59.8
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 7.6e-51 204.9 181 64.6
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 2.2e-50 203.4 231 56.3
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 3.7e-50 202.6 216 55.6
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 3.2e-49 199.5 169 65.1
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 4.1e-49 199.1 153 68.0
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 3.9e-47 192.6 197 54.8
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 4.3e-46 189.1 178 61.2
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 5.6e-46 188.7 138 73.9
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 8.1e-45 184.9 178 56.2
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 1.1e-44 184.5 121 75.2
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.5e-43 180.6 257 46.7
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 7.6e-43 178.3 138 68.1
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 6.4e-42 175.3 162 58.6
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 3.2e-41 172.9 121 72.7
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.1e-41 171.8 181 54.7
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.3e-39 167.5 116 72.4
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 1.6e-37 160.6 147 61.2
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 2.1e-37 160.2 113 71.7
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.0e-36 156.0 212 47.6
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 1.2e-35 154.5 153 54.9
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 2.6e-35 153.3 129 63.6
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 9.9e-35 151.4 171 43.9
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 2.2e-34 150.2 198 47.5
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.9e-31 139.4 114 64.9
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.1e-30 137.9 114 64.0
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 1.8e-28 130.6 151 56.3
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 2.2e-26 123.6 182 47.3
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 1.6e-24 117.5 98 63.3
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 2.3e-23 113.6 71 76.1
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 1.1e-22 111.3 71 74.6
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 3.7e-21 106.3 141 39.7
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 2.4e-20 103.6 181 35.4
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 4.5e-19 99.4 175 36.0
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 5.8e-19 99.0 66 77.3
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 5.8e-19 99.0 120 52.5
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 4.5e-11 72.8 53 73.6
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 3.8e-10 69.7 146 35.6
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 5.0e-10 69.3 35 91.4
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 6.5e-10 68.9 36 83.3
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.5e-10 68.9 128 40.6
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.4e-09 67.8 36 80.6
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 1.9e-09 67.4 37 86.5
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 9.3e-09 65.1 64 57.8
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 7.9e-08 62.0 33 84.8
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.1e-06 58.2 42 61.9
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 7.4e-06 55.5 34 70.6
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 9.7e-06 55.1 42 64.3


User provided reference genes

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