Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.1e-159 565.1 286 100.0
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.8e-122 443.0 286 81.1
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 4.1e-103 378.6 282 70.2
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.1e-98 362.5 282 66.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 4.4e-97 358.6 282 68.1
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 5.8e-97 358.2 276 67.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.7e-96 356.7 282 67.0
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 6.4e-96 354.8 285 64.2
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-95 354.0 281 64.8
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-95 354.0 281 64.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.9e-95 353.2 282 64.2
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.4e-95 352.8 282 66.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 4.1e-95 352.1 282 65.2
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 4.1e-95 352.1 282 65.2
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 5.4e-95 351.7 282 65.6
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 5.4e-95 351.7 282 65.2
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.2e-94 350.5 282 65.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.6e-94 350.1 282 65.2
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.6e-94 350.1 282 65.6
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 2.1e-94 349.7 282 62.8
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.7e-94 349.4 282 64.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 4.6e-94 348.6 282 65.6
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 6.0e-94 348.2 282 63.5
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.7e-93 346.7 282 64.5
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 5.1e-93 345.1 282 63.5
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 8.6e-93 344.4 282 64.2
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.5e-92 343.6 277 64.6
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.9e-92 343.2 282 63.1
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.5e-92 342.8 283 63.3
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.5e-92 342.8 282 64.9
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.6e-92 340.9 279 62.7
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.6e-91 340.1 282 63.1
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.1e-91 339.7 263 68.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.8e-91 339.3 282 64.2
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 2.8e-91 339.3 282 64.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 2.8e-91 339.3 278 63.3
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.6e-91 339.0 282 63.1
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 3.6e-91 339.0 278 63.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 6.2e-91 338.2 276 64.9
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 6.2e-91 338.2 276 64.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 6.2e-91 338.2 278 64.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.2e-91 338.2 282 63.5
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.2e-91 338.2 282 63.5
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 6.2e-91 338.2 282 63.5
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 6.2e-91 338.2 282 62.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 8.1e-91 337.8 282 63.8
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 8.1e-91 337.8 282 63.5
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 8.1e-91 337.8 288 61.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 1.1e-90 337.4 268 66.0
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.4e-90 337.0 282 63.1
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.4e-90 337.0 282 62.4
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.8e-90 336.7 282 63.8
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.8e-90 336.7 282 63.8
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 2.4e-90 336.3 282 64.2
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 3.1e-90 335.9 275 64.0
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 4.0e-90 335.5 282 62.4
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 8.9e-90 334.3 282 60.6
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.2e-89 334.0 282 61.7
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.0e-89 333.2 279 61.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 2.6e-89 332.8 272 63.2
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 4.4e-89 332.0 271 64.2
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 7.6e-89 331.3 278 62.6
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 3.8e-88 328.9 275 61.8
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 4.9e-88 328.6 275 62.2
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.4e-87 325.1 305 58.4
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 5.4e-87 325.1 276 61.2
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-86 323.9 280 60.7
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 2.1e-86 323.2 275 61.1
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.0e-85 320.9 272 62.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.7e-85 320.1 277 62.5
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 3.0e-85 319.3 305 57.0
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 3.9e-85 318.9 282 60.6
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.9e-84 316.6 270 62.6
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.6e-84 315.1 275 61.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.3e-84 314.7 269 62.5
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.3e-83 313.9 303 57.1
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.6e-83 312.4 275 60.7
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 4.8e-83 312.0 271 60.9
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 4.8e-83 312.0 271 60.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.4e-82 310.5 284 56.7
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.0e-82 308.9 282 56.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 2.0e-81 306.6 269 60.2
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 4.4e-81 305.4 269 60.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.3e-80 303.9 269 59.9
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 2.2e-80 303.1 282 58.2
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.4e-79 300.4 277 58.5
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.9e-79 300.1 251 63.7
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.9e-79 300.1 274 59.1
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.9e-79 300.1 252 64.3
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 3.8e-72 275.8 236 62.7
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 7.1e-71 271.6 284 54.2
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.0e-69 267.7 281 52.0
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.8e-69 266.9 269 53.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.8e-69 266.9 235 60.4
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.3e-69 266.5 274 54.7
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.1e-68 264.2 253 57.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.0e-65 253.4 311 48.6
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.0e-65 253.4 236 58.9
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.6e-65 251.5 238 58.0
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 4.6e-62 242.3 348 44.0
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 1.3e-61 240.7 280 46.8
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 2.2e-56 223.4 201 59.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 8.5e-56 221.5 262 45.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 7.9e-54 214.9 267 44.9
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-53 213.8 163 66.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.5e-52 209.9 163 65.6
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 9.7e-52 208.0 163 64.4
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 9.7e-52 208.0 163 64.4
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.2e-51 206.8 238 51.3
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 3.7e-51 206.1 156 66.0
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.5e-47 193.4 263 43.0
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 6.9e-42 175.3 154 59.7
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.5e-32 142.1 95 72.6
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.5e-31 140.2 206 43.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 2.1e-30 137.1 165 47.3
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 6.7e-29 132.1 150 50.0
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 7.7e-25 118.6 92 65.2
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.0e-21 108.2 84 61.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 3.4e-20 103.2 63 73.0
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.3e-19 101.3 81 63.0
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 3.5e-17 93.2 75 61.3
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.2e-15 86.7 66 66.7
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 8.3e-11 72.0 146 36.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 4.5e-09 66.2 136 27.9
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 6.6e-08 62.4 77 46.8


User provided reference genes

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