Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0014900 Salix brachista HOM05D002030 ORTHO05D004391 7.4e-106 387.1 182 100.0
ClCG09G003730 Citrullus lanatus HOM05D002030 ORTHO05D004391 5.5e-69 264.6 152 82.9
Sabra16G0138000 Salix brachista HOM05D002030 ORTHO05D004391 1.2e-68 263.5 152 82.9
Potri.001G230500 Populus trichocarpa HOM05D002030 ORTHO05D004391 6.8e-67 257.7 169 76.3
Manes.10G152000 Manihot esculenta HOM05D002030 ORTHO05D004391 7.5e-66 254.2 169 75.1
TWI09G1279 Tripterygium wilfordii HOM05D002030 ORTHO05D004391 1.3e-65 253.4 169 74.6
TWI73G0973 Tripterygium wilfordii HOM05D002030 ORTHO05D004391 3.7e-65 251.9 169 74.0
COL.COLO4_26822 Corchorus olitorius HOM05D002030 ORTHO05D004391 4.9e-65 251.5 169 74.0
PGR044G1446 Punica granatum HOM05D002030 ORTHO05D004391 4.9e-65 251.5 169 74.0
Manes.07G000500 Manihot esculenta HOM05D002030 ORTHO05D004391 6.3e-65 251.1 169 73.4
Sed0004903 Sechium edule HOM05D002030 ORTHO05D004391 6.3e-65 251.1 169 74.0
Thecc.01G416600 Theobroma cacao HOM05D002030 ORTHO05D004391 6.3e-65 251.1 169 74.0
Cpa.g.sc189.5 Carica papaya HOM05D002030 ORTHO05D004391 8.3e-65 250.8 169 74.0
Dinv43498 Davidia involucrata HOM05D002030 ORTHO05D004391 8.3e-65 250.8 169 74.0
CSS0004924 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D004391 1.1e-64 250.4 169 74.0
CSS0020062 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D004391 1.1e-64 250.4 169 74.0
MELO3C023506.2 Cucumis melo HOM05D002030 ORTHO05D004391 1.1e-64 250.4 169 73.4
CsaV3_7G031480 Cucumis sativus L. HOM05D002030 ORTHO05D004391 1.1e-64 250.4 169 73.4
RcHm_v2.0_Chr1g0313271 Rosa chinensis HOM05D002030 ORTHO05D004391 1.1e-64 250.4 169 72.8
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 1.4e-64 250.0 169 74.0
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 1.4e-64 250.0 169 74.0
Ciclev10031423m.g Citrus clementina HOM05D002030 ORTHO05D004391 1.4e-64 250.0 169 72.8
Rhsim07G0049800 Rhododendron simsii HOM05D002030 ORTHO05D004391 1.4e-64 250.0 169 74.0
CAN.G129.46 Capsicum annuum HOM05D002030 ORTHO05D004391 1.8e-64 249.6 169 72.8
ECA248G2977 Erigeron canadensis HOM05D002030 ORTHO05D004391 1.8e-64 249.6 169 73.4
Lsat_1_v5_gn_4_46541 Lactuca sativa HOM05D002030 ORTHO05D004391 1.8e-64 249.6 169 74.0
Sopen01g033350 Solanum pennellii HOM05D002030 ORTHO05D004391 1.8e-64 249.6 169 72.8
PGSC0003DMG400028982 Solanum tuberosum HOM05D002030 ORTHO05D004391 1.8e-64 249.6 169 72.8
Aqoxy2G00078 Aquilegia oxysepala HOM05D002030 ORTHO05D004391 2.4e-64 249.2 169 72.8
EL10Ac9g21933 Beta vulgaris HOM05D002030 ORTHO05D004391 2.4e-64 249.2 169 72.8
Cc02_g26940 Coffea canephora HOM05D002030 ORTHO05D004391 3.1e-64 248.8 169 73.4
THA.LOC104817150 Tarenaya hassleriana HOM05D002030 ORTHO05D004391 3.1e-64 248.8 169 73.4
Lj9A621G49 Lonicera japonica HOM05D002030 ORTHO05D004391 4.1e-64 248.4 169 73.4
Solyc01g073740.4 Solanum lycopersicum HOM05D002030 ORTHO05D004391 4.1e-64 248.4 169 72.8
ECA234G1190 Erigeron canadensis HOM05D002030 ORTHO05D004391 5.4e-64 248.1 169 72.8
Nitab4.5_0023974g0010 Nicotiana tabacum HOM05D002030 ORTHO05D004391 5.4e-64 248.1 169 72.8
HanXRQChr01g0018081 Helianthus annuus HOM05D002030 ORTHO05D004391 7.0e-64 247.7 169 72.8
Actinidia15851 Actinidia chinensis HOM05D002030 ORTHO05D004391 9.2e-64 247.3 169 72.8
EL10Ac4g10124 Beta vulgaris HOM05D002030 ORTHO05D004391 1.2e-63 246.9 169 71.6
EL10Ac4g10165 Beta vulgaris HOM05D002030 ORTHO05D004391 1.2e-63 246.9 169 71.6
Nn2g15681 Nelumbo nucifera HOM05D002030 ORTHO05D004391 1.2e-63 246.9 169 72.2
TAR623G1248 Trochodendron aralioides HOM05D002030 ORTHO05D004391 1.2e-63 246.9 169 72.8
TAR633G1299 Trochodendron aralioides HOM05D002030 ORTHO05D004391 1.2e-63 246.9 169 72.8
MSTRG.17066 Avicennia marina HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
MSTRG.4998 Avicennia marina HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
FAN01G0191 Fragaria x ananassa HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
FAN01G3098 Fragaria x ananassa HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
FAN03G0965 Fragaria x ananassa HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
FAN10G1580 Fragaria x ananassa HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.2
vmacro13609 Vaccinium macrocarpon HOM05D002030 ORTHO05D004391 1.6e-63 246.5 169 72.8
AUR62011552 Chenopodium quinoa HOM05D002030 ORTHO05D004391 2.0e-63 246.1 169 71.6
AUR62016372 Chenopodium quinoa HOM05D002030 ORTHO05D004391 2.0e-63 246.1 169 71.6
Nitab4.5_0000468g0060 Nicotiana tabacum HOM05D002030 ORTHO05D004391 2.0e-63 246.1 169 72.2
SGA_v2.0_scaffold95G28770 Striga asiatica HOM05D002030 ORTHO05D004391 2.0e-63 246.1 169 71.6
Aa31LG10G14260 Aethionema arabicum HOM05D002030 ORTHO05D004391 2.7e-63 245.7 169 71.6
HanXRQChr16g0520361 Helianthus annuus HOM05D002030 ORTHO05D004391 2.7e-63 245.7 169 72.2
MBI04_g33965_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D004391 2.7e-63 245.7 169 71.6
A04p01870 Brassica napus HOM05D002030 ORTHO05D004391 3.5e-63 245.4 169 71.6
BraA04t15910Z Brassica rapa HOM05D002030 ORTHO05D004391 3.5e-63 245.4 169 71.6
CANSAT11G1376 Cannabis sativa HOM05D002030 ORTHO05D004391 3.5e-63 245.4 169 72.2
Carub.0004s2693 Capsella rubella HOM05D002030 ORTHO05D004391 4.5e-63 245.0 169 71.6
Thhalv10005966m.g Eutrema salsugineum HOM05D002030 ORTHO05D004391 4.5e-63 245.0 169 71.6
FvH4_7g00080 Fragaria vesca HOM05D002030 ORTHO05D004391 4.5e-63 245.0 169 71.6
FAN06G4832 Fragaria x ananassa HOM05D002030 ORTHO05D004391 4.5e-63 245.0 169 71.6
Gohir.A05G160100 Gossypium hirsutum HOM05D002030 ORTHO05D004391 4.5e-63 245.0 169 72.2
Actinidia05845 Actinidia chinensis HOM05D002030 ORTHO05D004391 5.9e-63 244.6 169 72.2
Atru.chr11.2703 Acer truncatum HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.0
ATR0006G067 Amborella trichopoda HOM05D002030 ORTHO05D004391 7.7e-63 244.2 183 68.3
AL5G42300 Arabidopsis lyrata HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.6
BcaC02g10111 Brassica carinata HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.0
C04p32630 Brassica napus HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.0
BolC4t24830H Brassica oleracea HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.0
Prupe.2G002900 Prunus persica HOM05D002030 ORTHO05D004391 7.7e-63 244.2 169 71.6
Actinidia21583 Actinidia chinensis HOM05D002030 ORTHO05D004391 1.0e-62 243.8 170 71.8
BcaB01g03317 Brassica carinata HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
BcaB06g29369 Brassica carinata HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
A03p24780 Brassica napus HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
A04p33270 Brassica napus HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
C03p29550 Brassica napus HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
C04p70970 Brassica napus HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
BolC4t28600H Brassica oleracea HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
BraA03t11685Z Brassica rapa HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
BraA04t18788Z Brassica rapa HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
Eucgr.G03412 Eucalyptus grandis HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 70.4
Thhalv10001384m.g Eutrema salsugineum HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
Sp4g26410 Schrenkiella parvula HOM05D002030 ORTHO05D004391 1.0e-62 243.8 169 71.0
AT3G60100 Arabidopsis thaliana HOM05D002030 ORTHO05D004391 1.3e-62 243.4 169 71.6
BcaC01g05172 Brassica carinata HOM05D002030 ORTHO05D004391 1.3e-62 243.4 169 71.0
BolC3t15304H Brassica oleracea HOM05D002030 ORTHO05D004391 1.3e-62 243.4 169 71.0
SalBow5G3889 Salvia bowleyana HOM05D002030 ORTHO05D004391 1.3e-62 243.4 169 71.6
BcaB02g08193 Brassica carinata HOM05D002030 ORTHO05D004391 1.7e-62 243.0 169 71.0
GSVIVG01001358001 Vitis vinifera HOM05D002030 ORTHO05D004391 1.7e-62 243.0 169 71.6
Carub.0005s2683 Capsella rubella HOM05D002030 ORTHO05D004391 2.3e-62 242.7 169 71.0
CiPaw.16G066900 Carya illinoinensis HOM05D002030 ORTHO05D004391 2.3e-62 242.7 169 71.0
Duzib168G0303 Durio zibethinus HOM05D002030 ORTHO05D004391 2.3e-62 242.7 169 71.0
MBI01_g01369_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D004391 2.3e-62 242.7 169 71.6
MD00G1055300 Malus domestica HOM05D002030 ORTHO05D004391 2.3e-62 242.7 169 71.0
ATR0626G367 Amborella trichopoda HOM05D002030 ORTHO05D004391 2.9e-62 242.3 175 68.6
Gohir.D05G162800 Gossypium hirsutum HOM05D002030 ORTHO05D004391 2.9e-62 242.3 169 71.0
Gorai.009G167800 Gossypium raimondii HOM05D002030 ORTHO05D004391 2.9e-62 242.3 169 71.0
QL04p001335 Quercus lobata HOM05D002030 ORTHO05D004391 2.9e-62 242.3 169 70.4
QL04p001534 Quercus lobata HOM05D002030 ORTHO05D004391 2.9e-62 242.3 169 70.4
PSO339G0144 Papaver somniferum HOM05D002030 ORTHO05D004391 3.8e-62 241.9 169 69.8
PSO384G2681 Papaver somniferum HOM05D002030 ORTHO05D004391 3.8e-62 241.9 169 69.8
HPP92_022742 Vanilla planifolia HOM05D002030 ORTHO05D004391 5.0e-62 241.5 175 70.3
AT2G44350 Arabidopsis thaliana HOM05D002030 ORTHO05D004391 8.6e-62 240.7 169 69.8
AL4G43330 Arabidopsis lyrata HOM05D002030 ORTHO05D004391 1.1e-61 240.4 169 70.4
CARHR170410 Cardamine hirsuta HOM05D002030 ORTHO05D004391 1.1e-61 240.4 169 69.8
MD02G1319300 Malus domestica HOM05D002030 ORTHO05D004391 1.5e-61 240.0 169 70.4
Haze_03285 Corylus avellana HOM05D002030 ORTHO05D004391 1.9e-61 239.6 169 71.0
Lsat_1_v5_gn_1_87220 Lactuca sativa HOM05D002030 ORTHO05D004391 4.3e-61 238.4 165 70.9
Aa31LG1G25930 Aethionema arabicum HOM05D002030 ORTHO05D004391 7.3e-61 237.7 169 68.6
Migut.N01657 Erythranthe guttata HOM05D002030 ORTHO05D004391 7.3e-61 237.7 169 68.6
Migut.O00475 Erythranthe guttata HOM05D002030 ORTHO05D004391 7.3e-61 237.7 169 68.6
CDE06G2277 Ceratophyllum demersum HOM05D002030 ORTHO05D004391 1.6e-60 236.5 169 68.6
Hma1.2p1_0293F.1_g116260 Hydrangea macrophylla HOM05D002030 ORTHO05D004391 8.0e-60 234.2 169 67.5
Zm00001eb236450 Zea mays HOM05D002030 ORTHO05D004391 1.4e-59 233.4 169 68.0
Oeu024931.4 Olea europaea HOM05D002030 ORTHO05D004391 1.8e-59 233.0 205 59.5
Sed0005598 Sechium edule HOM05D002030 ORTHO05D004391 2.3e-59 232.6 169 66.9
Zm00001eb206100 Zea mays HOM05D002030 ORTHO05D004391 3.0e-59 232.3 169 66.9
Oeu032787.1 Olea europaea HOM05D002030 ORTHO05D004391 4.0e-59 231.9 198 60.1
Hma1.2p1_0505F.1_g168140 Hydrangea macrophylla HOM05D002030 ORTHO05D004391 6.8e-59 231.1 169 66.9
Os02g0194100 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D004391 6.8e-59 231.1 169 67.5
Os11g0538900 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D004391 6.8e-59 231.1 169 67.5
Peaxi162Scf00402g00612 Petunia axillaris HOM05D002030 ORTHO05D004391 8.9e-59 230.7 204 59.8
DCAR_029593 Daucus carota HOM05D002030 ORTHO05D004391 2.9e-57 225.7 217 55.3
Sc02g0003780 Simmondsia chinensis HOM05D002030 ORTHO05D004391 8.3e-57 224.2 154 71.4
unitig_61.g26437 Utricularia gibba HOM05D002030 ORTHO05D004391 1.4e-56 223.4 166 67.5
Oeu000987.1 Olea europaea HOM05D002030 ORTHO05D004391 1.8e-56 223.0 169 64.5
SGA_v2.0_scaffold4G02232 Striga asiatica HOM05D002030 ORTHO05D004391 9.2e-56 220.7 159 68.6
Zm00001eb206090 Zea mays HOM05D002030 ORTHO05D004391 1.7e-54 216.5 169 60.9
Mapoly0063s0010 Marchantia polymorpha HOM05D002030 ORTHO05D004391 6.6e-54 214.5 169 62.1
Mapoly0200s0007 Marchantia polymorpha HOM05D002030 ORTHO05D004391 6.6e-54 214.5 169 62.1
Lalb_Chr25g0283641 Lupinus albus HOM05D002030 ORTHO05D004391 8.6e-54 214.2 170 64.1
Mapoly0216s0011 Marchantia polymorpha HOM05D002030 ORTHO05D004391 1.1e-53 213.8 169 61.5
Cfa010689 Carpinus fangiana HOM05D002030 ORTHO05D004391 1.5e-53 213.4 158 67.7
Medtr2g061630 Medicago truncatula HOM05D002030 ORTHO05D004391 1.9e-53 213.0 170 62.9
Mapoly0383s0001 Marchantia polymorpha HOM05D002030 ORTHO05D004391 3.3e-53 212.2 169 61.5
Sp5g03110 Schrenkiella parvula HOM05D002030 ORTHO05D004391 4.3e-53 211.8 157 68.8
Psat1g127120 Pisum sativum HOM05D002030 ORTHO05D004391 7.3e-53 211.1 170 62.9
arahy.Tifrunner.gnm1.ann1.PFQ45M Arachis hypogaea HOM05D002030 ORTHO05D004391 9.5e-53 210.7 170 61.8
arahy.Tifrunner.gnm1.ann1.X24NYN Arachis hypogaea HOM05D002030 ORTHO05D004391 9.5e-53 210.7 170 61.8
AagrBONN_evm.TU.Sc2ySwM_117.1175 Anthoceros agrestis HOM05D002030 ORTHO05D004391 1.2e-52 210.3 169 62.7
AagrBONN_evm.TU.Sc2ySwM_228.5639 Anthoceros agrestis HOM05D002030 ORTHO05D004391 1.2e-52 210.3 169 62.7
Lj3g0024225 Lotus japonicus HOM05D002030 ORTHO05D004391 1.2e-52 210.3 170 62.9
Pp3c1_40030 Physcomitrium patens HOM05D002030 ORTHO05D004391 1.2e-52 210.3 169 61.5
SEGI_39166 Sequoiadendron giganteum HOM05D002030 ORTHO05D004391 1.2e-52 210.3 167 61.7
Phvul.005G041600 Phaseolus vulgaris HOM05D002030 ORTHO05D004391 1.0e-51 207.2 170 61.8
Ca_02885_v3 Cicer arietinum L. HOM05D002030 ORTHO05D004391 1.8e-51 206.5 170 61.2
Ca_02887_v3 Cicer arietinum L. HOM05D002030 ORTHO05D004391 1.8e-51 206.5 170 61.2
VMungo1080G0649 Vigna mungo HOM05D002030 ORTHO05D004391 1.8e-51 206.5 170 62.4
Glyma.08G157700 Glycine max HOM05D002030 ORTHO05D004391 2.3e-51 206.1 170 61.8
Glyma.15G268500 Glycine max HOM05D002030 ORTHO05D004391 2.3e-51 206.1 170 61.8
Pp3c13_21410 Physcomitrium patens HOM05D002030 ORTHO05D004391 2.3e-51 206.1 169 60.4
Lalb_Chr20g0108201 Lupinus albus HOM05D002030 ORTHO05D004391 9.8e-50 200.7 183 57.9
Haze_26913 Corylus avellana HOM05D002030 ORTHO05D004391 1.7e-49 199.9 169 58.6
PRCOL_00005650 Prasinoderma coloniale HOM05D002030 ORTHO05D004391 3.7e-49 198.7 166 61.4
SMO118G0428 Selaginella moellendorffii HOM05D002030 ORTHO05D004391 6.4e-49 198.0 169 59.8
CARHR139510 Cardamine hirsuta HOM05D002030 ORTHO05D004391 2.7e-47 192.6 140 68.6
Cfa026498 Carpinus fangiana HOM05D002030 ORTHO05D004391 2.3e-46 189.5 169 56.2
Cre12.g514750 Chlamydomonas reinhardtii HOM05D002030 ORTHO05D004391 2.3e-46 189.5 173 56.1
MCO01G768 Micromonas commoda HOM05D002030 ORTHO05D004391 6.2e-44 181.4 169 54.4
CBR_g11008 Chara braunii HOM05D002030 ORTHO05D004391 2.4e-40 169.5 161 52.8
CSS0014563 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D004391 4.6e-39 165.2 104 76.9
Dinv43938 Davidia involucrata HOM05D002030 ORTHO05D004391 3.9e-38 162.2 114 71.9
ATR0626G052 Amborella trichopoda HOM05D002030 ORTHO05D004391 5.1e-38 161.8 149 60.4
TPR.G16151 Trifolium pratense HOM05D002030 ORTHO05D004391 8.1e-36 154.5 114 65.8
Cfa027058 Carpinus fangiana HOM05D002030 ORTHO05D004391 6.4e-33 144.8 169 45.0
CDE07G1107 Ceratophyllum demersum HOM05D002030 ORTHO05D028682 3.3e-29 132.5 154 47.4
HPP92_022773 Vanilla planifolia HOM05D002030 ORTHO05D004391 1.7e-25 120.2 84 71.4
Pp3c12_7330 Physcomitrium patens HOM05D002030 ORTHO05D004391 2.2e-17 93.2 80 57.5
TAR636G2333 Trochodendron aralioides HOM05D002030 ORTHO05D004391 2.1e-15 86.7 47 80.9
TPR.G8919 Trifolium pratense HOM05D002030 ORTHO05D004391 1.1e-13 80.9 64 62.5
Potri.009G023900 Populus trichocarpa HOM05D002030 ORTHO05D028124 1.9e-13 80.1 39 89.7
unitig_0.g1368 Utricularia gibba HOM05D002030 ORTHO05D004391 2.1e-12 76.6 68 54.4
arahy.Tifrunner.gnm1.ann1.UNUC9P Arachis hypogaea HOM05D000200 ORTHO05D010534 8.1e-12 74.7 35 85.7
Aa31LG8G15420 Aethionema arabicum HOM05D002030 ORTHO05D010534 7.6e-10 68.2 56 55.4
Mapoly0383s0002 Marchantia polymorpha HOM05D002030 ORTHO05D028124 8.4e-09 64.7 40 70.0
Atru.chr1.1335 Acer truncatum HOM05D002030 ORTHO05D004391 6.7e-06 55.1 134 32.1


User provided reference genes

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