Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 8.6e-120 433.7 227 100.0
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 6.8e-109 397.5 227 91.2
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.3e-94 350.1 227 79.3
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.8e-94 348.2 227 78.9
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.8e-94 348.2 227 78.9
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.2e-92 343.6 226 79.6
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 2.6e-92 342.4 227 78.4
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 2.6e-92 342.4 227 76.7
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 3.8e-91 338.6 227 77.1
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 3.8e-91 338.6 227 72.2
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 76.7
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 1.1e-90 337.0 227 76.2
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 1.4e-90 336.7 227 76.7
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.9e-90 336.3 218 79.8
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 2.4e-90 335.9 227 76.2
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 2.4e-90 335.9 227 76.7
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 2.4e-90 335.9 227 75.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 3.2e-90 335.5 227 75.3
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 3.2e-90 335.5 224 76.8
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 4.2e-90 335.1 223 75.3
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 77.5
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 75.8
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 7.1e-90 334.3 227 75.8
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 74.9
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 75.8
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.2e-89 333.6 227 75.8
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 1.2e-89 333.6 227 74.9
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.6e-89 333.2 227 76.2
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 1.6e-89 333.2 227 76.2
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.7e-89 332.4 224 76.3
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 6.0e-89 331.3 227 75.3
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.3e-88 330.1 224 75.0
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.7e-88 329.7 227 74.9
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 3.0e-88 328.9 224 75.9
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 3.0e-88 328.9 224 75.9
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 5.1e-88 328.2 224 75.4
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.5e-87 326.6 227 75.3
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 74.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 2.1e-86 322.8 224 73.2
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 2.1e-86 322.8 227 73.6
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.6e-86 322.0 227 71.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 3.6e-86 322.0 227 74.0
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 6.2e-86 321.2 237 70.0
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 72.3
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 74.1
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 72.8
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.8e-85 319.7 227 74.0
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.1e-85 318.9 228 73.2
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 4.0e-85 318.5 227 71.4
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 6.9e-85 317.8 227 72.7
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 9.0e-85 317.4 260 65.0
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 2.0e-84 316.2 227 73.1
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.6e-84 315.8 249 66.7
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 3.4e-84 315.5 227 71.8
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.5e-84 315.1 225 71.6
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 4.5e-84 315.1 227 72.7
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 5.8e-84 314.7 228 72.4
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 9.9e-84 313.9 267 63.7
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.7e-83 313.2 220 72.7
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-82 310.5 227 68.7
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-82 310.5 227 68.7
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 67.8
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 5.4e-82 308.1 224 72.8
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 2.7e-81 305.8 227 67.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 3.5e-81 305.4 224 68.3
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.3e-80 303.5 224 71.4
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.8e-80 303.1 241 67.2
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 2.3e-80 302.8 210 74.8
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 6.7e-80 301.2 221 71.5
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.5e-79 300.1 224 69.6
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 7.4e-79 297.7 224 67.0
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 2.1e-78 296.2 224 68.3
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.8e-78 295.8 224 68.8
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 3.7e-78 295.4 227 64.8
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 3.7e-78 295.4 227 69.6
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 4.8e-78 295.0 227 64.8
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 6.2e-78 294.7 207 73.9
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.8e-77 293.1 194 78.9
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 6.9e-77 291.2 227 64.3
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.2e-76 290.4 220 69.1
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 3.4e-76 288.9 227 63.9
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 3.4e-76 288.9 227 63.9
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.4e-76 288.9 232 67.2
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 7.6e-76 287.7 210 67.1
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.7e-75 286.6 227 63.4
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.7e-75 286.6 227 63.4
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.7e-75 286.6 227 63.4
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.7e-75 286.6 202 72.8
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.8e-75 285.4 227 65.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 4.6e-73 278.5 195 76.9
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 4.6e-73 278.5 241 65.6
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.9e-71 273.1 227 63.9
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.9e-71 273.1 227 63.4
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 2.5e-71 272.7 227 60.8
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.3e-67 260.4 214 63.6
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 3.8e-67 258.8 213 62.9
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.1e-66 257.3 207 64.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 1.6e-65 253.4 224 60.7
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.5e-63 246.1 222 59.9
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.5e-63 246.1 222 59.9
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 3.7e-62 242.3 223 58.7
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.8e-61 240.0 222 59.0
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.0e-59 234.2 191 61.3
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.7e-59 233.4 221 53.4
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.7e-54 216.9 207 52.2
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 7.4e-47 191.4 215 45.6
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 8.2e-46 188.0 139 67.6
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 9.1e-45 184.5 159 64.2
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 6.7e-40 168.3 188 45.7
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.4e-37 160.6 210 48.1
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.0e-32 142.9 163 54.6
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 2.7e-28 129.8 99 69.7
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 1.9e-26 123.6 94 59.6
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.8e-16 90.5 220 28.6
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 1.8e-16 90.5 194 30.9
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.7e-11 73.9 228 27.2
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 1.0e-08 64.7 106 46.2
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 3.1e-08 63.2 95 46.3


User provided reference genes

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