Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.1e-220 769.6 383 100.0
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 4.3e-140 501.9 275 94.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.4e-135 486.9 275 90.9
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 5.0e-128 461.8 275 84.7
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-126 456.8 275 84.0
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-126 456.8 275 84.0
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 3.0e-125 452.6 275 81.5
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.5e-124 450.3 275 82.5
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 5.7e-124 448.4 278 82.0
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 8.2e-123 444.5 275 81.8
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.4e-122 443.7 275 81.1
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.4e-122 443.7 275 80.4
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.4e-122 443.7 275 81.1
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.1e-122 442.6 275 80.0
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.2e-121 440.7 275 80.7
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.6e-121 440.3 275 79.6
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.6e-121 439.5 275 80.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.5e-121 439.1 275 80.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 3.5e-121 439.1 275 78.5
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.7e-121 438.0 275 80.4
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 7.7e-121 438.0 275 80.4
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.0e-120 437.6 275 78.5
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.0e-120 437.6 275 78.5
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.7e-120 436.8 275 79.6
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.2e-120 436.4 275 79.3
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.8e-120 435.6 275 80.0
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.8e-120 435.6 275 80.0
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.8e-120 435.6 275 79.6
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 6.5e-120 434.9 275 81.1
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 8.5e-120 434.5 275 80.0
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 8.5e-120 434.5 275 80.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 8.5e-120 434.5 275 78.5
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 8.5e-120 434.5 275 79.6
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 8.5e-120 434.5 275 80.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-119 433.7 275 81.1
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-119 433.7 275 81.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.9e-119 433.3 275 79.3
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.2e-119 432.6 275 79.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.5e-119 431.8 275 78.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.6e-118 430.3 275 77.8
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.1e-118 429.9 275 78.5
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.6e-118 429.1 275 76.7
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.0e-117 427.6 275 77.5
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.8e-117 426.8 275 78.2
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.3e-117 426.4 275 78.2
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.7e-117 424.9 275 77.8
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.0e-116 423.3 275 78.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 2.6e-116 422.9 275 77.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 7.5e-116 421.4 275 76.0
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 9.7e-116 421.0 275 75.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.3e-115 420.6 275 78.2
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.8e-115 419.5 275 77.1
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 3.7e-115 419.1 275 76.4
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.2e-115 417.9 275 76.4
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.1e-114 415.6 275 75.6
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 4.1e-114 415.6 275 76.0
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 5.3e-114 415.2 275 74.2
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.6e-113 413.7 277 75.1
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 5.9e-113 411.8 275 74.9
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.1e-111 407.5 272 75.7
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.4e-111 404.4 267 74.2
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.1e-110 403.3 272 75.0
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.0e-109 401.0 277 75.8
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.8e-109 400.2 275 71.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.3e-109 399.8 276 73.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.0e-109 399.1 278 73.4
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 5.2e-109 398.7 275 73.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 6.8e-109 398.3 277 72.2
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 8.8e-109 397.9 278 73.4
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.8e-107 392.1 275 70.9
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.1e-106 391.0 277 72.2
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 7.7e-105 384.8 275 70.2
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.0e-104 384.4 278 69.8
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-104 384.0 275 69.1
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 1.3e-104 384.0 275 70.2
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.9e-104 382.9 275 69.8
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 6.5e-104 381.7 275 69.8
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 6.5e-104 381.7 275 69.8
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 6.5e-104 381.7 275 69.1
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 8.5e-104 381.3 275 68.4
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.9e-103 380.2 275 69.5
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.5e-103 379.8 275 69.1
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 3.2e-103 379.4 275 69.1
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 5.5e-103 378.6 275 69.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.2e-102 377.5 275 68.7
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.1e-102 376.7 275 69.5
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.1e-102 376.7 275 68.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.1e-102 376.7 278 69.8
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 4.7e-102 375.6 275 67.6
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 4.7e-102 375.6 287 68.3
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-101 374.4 275 67.6
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.0e-101 374.4 275 67.6
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.0e-101 374.4 275 67.6
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.3e-99 367.5 275 68.4
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 5.4e-98 362.1 275 68.0
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 9.5e-95 351.3 223 78.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.5e-92 344.0 255 67.1
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.7e-91 340.5 223 76.2
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.9e-91 339.0 249 66.7
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.2e-90 336.3 222 77.5
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 6.6e-88 328.6 276 62.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.5e-87 327.4 270 64.1
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 6.8e-85 318.5 275 57.8
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 2.2e-83 313.5 201 77.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 8.3e-83 311.6 210 73.8
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 4.1e-82 309.3 281 56.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.0e-82 308.5 233 69.5
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.3e-80 304.3 187 79.7
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-80 304.3 204 76.0
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.6e-78 296.2 197 73.1
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.4e-77 294.3 193 75.1
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 5.6e-71 272.3 173 75.1
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.3e-64 251.1 315 47.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 6.6e-64 248.8 275 52.7
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.2e-51 207.2 286 42.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 3.7e-38 163.3 319 37.3
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.8e-38 162.9 105 78.1
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 3.1e-37 160.2 177 49.2
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.8e-35 153.3 139 56.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-34 151.8 139 61.2
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.4e-29 134.8 88 70.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.3e-27 128.3 86 77.9
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.1e-26 125.2 275 34.5
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 4.3e-23 113.2 72 70.8
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.4e-21 108.2 148 47.3
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 4.5e-20 103.2 314 29.6
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.9e-19 100.5 64 81.2
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 6.7e-16 89.4 60 61.7
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.8e-13 81.3 63 61.9
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 2.5e-10 70.9 66 59.1


User provided reference genes

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