Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0061000 Salix brachista HOM05D000198 ORTHO05D005702 9.8e-141 503.4 253 100.0
Sabra10G0133900 Salix brachista HOM05D000198 ORTHO05D005702 2.6e-24 116.7 137 54.7
Potri.010G174000 Populus trichocarpa HOM05D000198 ORTHO05D005702 5.8e-24 115.5 137 54.7
Dinv42461 Davidia involucrata HOM05D000198 ORTHO05D005702 1.4e-22 110.9 137 49.6
Thecc.07G192200 Theobroma cacao HOM05D000198 ORTHO05D005702 1.4e-22 110.9 140 47.9
Duzib213G0040 Durio zibethinus HOM05D000198 ORTHO05D005702 1.9e-22 110.5 159 45.3
MD10G1216600 Malus domestica HOM05D000198 ORTHO05D005702 2.4e-22 110.2 159 45.9
Duzib268G0428 Durio zibethinus HOM05D000198 ORTHO05D005702 7.1e-22 108.6 161 44.7
Manes.16G048100 Manihot esculenta HOM05D000198 ORTHO05D005702 9.2e-22 108.2 158 44.3
TPR.G28436 Trifolium pratense HOM05D000198 ORTHO05D005702 9.2e-22 108.2 137 51.1
Ca_03179_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005702 2.1e-21 107.1 137 50.4
Hma1.2p1_0334F.1_g128390 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 2.1e-21 107.1 137 49.6
Medtr2g067660 Medicago truncatula HOM05D000198 ORTHO05D005702 2.1e-21 107.1 137 50.4
Phvul.005G048150 Phaseolus vulgaris HOM05D000198 ORTHO05D005702 2.7e-21 106.7 137 48.9
Atru.chr1.55 Acer truncatum HOM05D000198 ORTHO05D005702 4.6e-21 105.9 158 43.7
CsaV3_6G013440 Cucumis sativus L. HOM05D000198 ORTHO05D005702 4.6e-21 105.9 136 49.3
QL04p094021 Quercus lobata HOM05D000198 ORTHO05D005702 4.6e-21 105.9 138 50.0
COL.COLO4_24975 Corchorus olitorius HOM05D000198 ORTHO05D005702 6.0e-21 105.5 141 46.8
MD05G1238300 Malus domestica HOM05D000198 ORTHO05D005702 6.0e-21 105.5 159 44.0
ClCG02G018730 Citrullus lanatus HOM05D000198 ORTHO05D005702 7.8e-21 105.1 136 49.3
Lj3g0005942 Lotus japonicus HOM05D000198 ORTHO05D005702 7.8e-21 105.1 140 46.4
Peaxi162Scf00153g00189 Petunia axillaris HOM05D000198 ORTHO05D005702 7.8e-21 105.1 137 47.4
Glyma.08G163700 Glycine max HOM05D000198 ORTHO05D005702 1.0e-20 104.8 137 48.2
Hma1.2p1_1896F.1_g306840 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 1.0e-20 104.8 137 48.2
RcHm_v2.0_Chr5g0023391 Rosa chinensis HOM05D000198 ORTHO05D005702 1.0e-20 104.8 137 48.9
MELO3C019622.2 Cucumis melo HOM05D000198 ORTHO05D005702 1.3e-20 104.4 136 49.3
Nitab4.5_0000194g0150 Nicotiana tabacum HOM05D000198 ORTHO05D005702 1.3e-20 104.4 136 47.8
Psat1g015240 Pisum sativum HOM05D000198 ORTHO05D005702 1.3e-20 104.4 140 48.6
Ciclev10004713m.g Citrus clementina HOM05D000198 ORTHO05D005702 1.7e-20 104.0 140 45.0
FvH4_3g14080 Fragaria vesca HOM05D000198 ORTHO05D005702 1.7e-20 104.0 137 48.9
FAN16G0643 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.7e-20 104.0 137 48.9
FAN21G2180 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.7e-20 104.0 137 48.9
PGR031G3164 Punica granatum HOM05D000198 ORTHO05D005702 1.7e-20 104.0 137 46.7
Haze_07763 Corylus avellana HOM05D000198 ORTHO05D005702 3.0e-20 103.2 137 47.4
Glyma.15G263500 Glycine max HOM05D000198 ORTHO05D005702 3.0e-20 103.2 137 47.4
Solyc09g090700.1 Solanum lycopersicum HOM05D000198 ORTHO05D005702 3.0e-20 103.2 136 46.3
Aqoxy1G01365 Aquilegia oxysepala HOM05D000198 ORTHO05D005702 5.1e-20 102.4 158 44.9
FAN25G1729 Fragaria x ananassa HOM05D000198 ORTHO05D005702 5.1e-20 102.4 137 48.2
Gorai.002G110500 Gossypium raimondii HOM05D000198 ORTHO05D005702 5.1e-20 102.4 159 44.0
Nitab4.5_0013063g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005702 5.1e-20 102.4 136 47.1
CAN.G524.27 Capsicum annuum HOM05D000198 ORTHO05D005702 6.6e-20 102.1 136 46.3
CiPaw.11G057000 Carya illinoinensis HOM05D000198 ORTHO05D005702 6.6e-20 102.1 140 45.0
Prupe.4G128100 Prunus persica HOM05D000198 ORTHO05D005702 6.6e-20 102.1 137 48.9
CDE02G0078 Ceratophyllum demersum HOM05D000198 ORTHO05D005702 8.6e-20 101.7 149 45.0
Lalb_Chr20g0108421 Lupinus albus HOM05D000198 ORTHO05D005702 8.6e-20 101.7 139 45.3
SalBow8G1239 Salvia bowleyana HOM05D000198 ORTHO05D005702 8.6e-20 101.7 140 45.7
Sopen09g033640 Solanum pennellii HOM05D000198 ORTHO05D005702 8.6e-20 101.7 136 45.6
THA.LOC104808138 Tarenaya hassleriana HOM05D000198 ORTHO05D005702 8.6e-20 101.7 137 48.2
Gohir.A01G100200 Gossypium hirsutum HOM05D000198 ORTHO05D005702 1.1e-19 101.3 159 44.0
EL10Ac2g03290 Beta vulgaris HOM05D000198 ORTHO05D005702 1.5e-19 100.9 137 46.7
SGA_v2.0_scaffold7G03629 Striga asiatica HOM05D000198 ORTHO05D005702 1.5e-19 100.9 168 41.1
TAR626G1240 Trochodendron aralioides HOM05D000198 ORTHO05D005702 1.5e-19 100.9 137 48.2
Sed0009726 Sechium edule HOM05D000198 ORTHO05D005702 1.9e-19 100.5 136 47.8
GSVIVG01036719001 Vitis vinifera HOM05D000198 ORTHO05D005702 1.9e-19 100.5 138 46.4
Actinidia12753 Actinidia chinensis HOM05D000198 ORTHO05D005702 2.5e-19 100.1 135 48.9
SHI33378 Sapria himalayana HOM05D000198 ORTHO05D005702 2.5e-19 100.1 140 47.1
PGSC0003DMG400017144 Solanum tuberosum HOM05D000198 ORTHO05D005702 2.5e-19 100.1 136 45.6
Cfa019371 Carpinus fangiana HOM05D000198 ORTHO05D005702 3.3e-19 99.8 137 45.3
CDE06G0595 Ceratophyllum demersum HOM05D000198 ORTHO05D005702 3.3e-19 99.8 136 47.1
Gohir.D01G084900 Gossypium hirsutum HOM05D000198 ORTHO05D005702 3.3e-19 99.8 159 43.4
C06p53340 Brassica napus HOM05D000198 ORTHO05D005702 4.3e-19 99.4 159 42.8
BolC6t40351H Brassica oleracea HOM05D000198 ORTHO05D005702 4.3e-19 99.4 159 42.8
Nn8g40255 Nelumbo nucifera HOM05D000198 ORTHO05D005702 4.3e-19 99.4 136 45.6
Sp5g34490 Schrenkiella parvula HOM05D000198 ORTHO05D005702 4.3e-19 99.4 159 42.8
MSTRG.7092 Avicennia marina HOM05D000198 ORTHO05D005702 5.6e-19 99.0 137 46.7
A07p44510 Brassica napus HOM05D000198 ORTHO05D005702 5.6e-19 99.0 137 46.7
BraA07t31961Z Brassica rapa HOM05D000198 ORTHO05D005702 5.6e-19 99.0 137 46.7
Migut.M01503 Erythranthe guttata HOM05D000198 ORTHO05D005702 5.6e-19 99.0 139 46.0
TWI38G0157 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 5.6e-19 99.0 136 47.1
TWI38G1970 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 5.6e-19 99.0 136 47.1
Aa31LG4G1580 Aethionema arabicum HOM05D000198 ORTHO05D005702 7.3e-19 98.6 137 47.4
Peaxi162Scf00117g00003 Petunia axillaris HOM05D000198 ORTHO05D005702 7.3e-19 98.6 139 44.6
Carub.0002s2630 Capsella rubella HOM05D000198 ORTHO05D005702 9.5e-19 98.2 137 47.4
arahy.Tifrunner.gnm1.ann1.15VWWC Arachis hypogaea HOM05D000198 ORTHO05D005702 1.2e-18 97.8 135 43.7
arahy.Tifrunner.gnm1.ann1.D1NSDN Arachis hypogaea HOM05D000198 ORTHO05D005702 1.2e-18 97.8 135 43.7
CANSAT56G2629 Cannabis sativa HOM05D000198 ORTHO05D005702 1.2e-18 97.8 135 47.4
CANSAT56G4341 Cannabis sativa HOM05D000198 ORTHO05D005702 1.2e-18 97.8 135 47.4
FAN11G1157 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.2e-18 97.8 103 53.4
Eucgr.F04474 Eucalyptus grandis HOM05D000198 ORTHO05D005702 2.1e-18 97.1 137 46.0
Lalb_Chr25g0284351 Lupinus albus HOM05D000198 ORTHO05D005702 2.1e-18 97.1 135 45.9
AT1G79440 Arabidopsis thaliana HOM05D000198 ORTHO05D005702 3.6e-18 96.3 137 46.0
Thhalv10018394m.g Eutrema salsugineum HOM05D000198 ORTHO05D005702 3.6e-18 96.3 137 45.3
Ah.02g111790 Amaranthus hybridus HOM05D000198 ORTHO05D005702 4.7e-18 95.9 139 45.3
Sc06g0002010 Simmondsia chinensis HOM05D000198 ORTHO05D005702 4.7e-18 95.9 140 42.9
Cc05_g16560 Coffea canephora HOM05D000198 ORTHO05D005702 6.2e-18 95.5 136 45.6
Lsat_1_v5_gn_7_110980 Lactuca sativa HOM05D000198 ORTHO05D005702 6.2e-18 95.5 136 47.1
unitig_26.g10057 Utricularia gibba HOM05D000198 ORTHO05D005702 8.1e-18 95.1 163 41.7
AL2G40050 Arabidopsis lyrata HOM05D000198 ORTHO05D005702 1.1e-17 94.7 159 42.8
ATR0697G108 Amborella trichopoda HOM05D000198 ORTHO05D005702 1.4e-17 94.4 136 44.1
HanXRQChr07g0190721 Helianthus annuus HOM05D000198 ORTHO05D005702 1.4e-17 94.4 138 44.9
HanXRQChr13g0419821 Helianthus annuus HOM05D000198 ORTHO05D005702 1.4e-17 94.4 139 43.9
SalBow8G0624 Salvia bowleyana HOM05D000198 ORTHO05D005702 2.4e-17 93.6 100 54.0
Actinidia26209 Actinidia chinensis HOM05D000198 ORTHO05D005702 3.1e-17 93.2 135 47.4
DCAR_004554 Daucus carota HOM05D000198 ORTHO05D005702 3.1e-17 93.2 105 46.7
ECA236G0201 Erigeron canadensis HOM05D000198 ORTHO05D005702 3.1e-17 93.2 158 39.9
DCAR_032012 Daucus carota HOM05D000198 ORTHO05D005702 5.2e-17 92.4 106 48.1
Cpa.g.sc32.93 Carica papaya HOM05D000198 ORTHO05D005702 1.2e-16 91.3 145 43.4
HanXRQChr11g0335841 Helianthus annuus HOM05D000198 ORTHO05D005702 1.2e-16 91.3 136 44.1
HanXRQChr11g0335851 Helianthus annuus HOM05D000198 ORTHO05D005702 1.2e-16 91.3 136 44.1
Hund12032 Selenicereus undatus HOM05D000198 ORTHO05D005702 1.5e-16 90.9 171 40.9
Zm00001eb207050 Zea mays HOM05D000198 ORTHO05D005702 2.6e-16 90.1 135 44.4
Zm00001eb233300 Zea mays HOM05D000198 ORTHO05D005702 3.4e-16 89.7 135 44.4
unitig_749.g13692 Utricularia gibba HOM05D000198 ORTHO05D005702 5.8e-16 89.0 135 41.5
GSVIVG01036721001 Vitis vinifera HOM05D000198 ORTHO05D005702 5.8e-16 89.0 136 41.9
vmacro11676 Vaccinium macrocarpon HOM05D000198 ORTHO05D005702 1.3e-15 87.8 82 63.4
HanXRQChr11g0335861 Helianthus annuus HOM05D000198 ORTHO05D005702 1.7e-15 87.4 136 42.6
PSO384G4748 Papaver somniferum HOM05D000198 ORTHO05D005702 2.2e-15 87.0 136 42.6
CSS0048947 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005702 2.9e-15 86.7 81 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3765 Anthoceros agrestis HOM05D000198 ORTHO05D005702 3.8e-15 86.3 102 47.1
HanXRQChr07g0190661 Helianthus annuus HOM05D000198 ORTHO05D005702 3.8e-15 86.3 136 40.4
Rhsim06G0244300 Rhododendron simsii HOM05D000198 ORTHO05D005702 3.8e-15 86.3 82 61.0
Oeu019733.1 Olea europaea HOM05D000198 ORTHO05D005702 7.1e-14 82.0 80 57.5
AUR62039633 Chenopodium quinoa HOM05D000198 ORTHO05D005702 9.2e-14 81.6 83 57.8
Mapoly0091s0004 Marchantia polymorpha HOM05D000198 ORTHO05D005702 9.2e-14 81.6 102 44.1
AUR62024986 Chenopodium quinoa HOM05D000198 ORTHO05D005702 1.2e-13 81.3 82 57.3
GSVIVG01036720001 Vitis vinifera HOM05D000198 ORTHO05D005702 1.2e-13 81.3 136 40.4
SMO364G0446 Selaginella moellendorffii HOM05D000198 ORTHO05D005702 2.1e-13 80.5 137 39.4
Pp3c26_10950 Physcomitrium patens HOM05D000198 ORTHO05D005702 1.0e-12 78.2 136 40.4
Pp3c26_10958 Physcomitrium patens HOM05D000198 ORTHO05D005702 1.0e-12 78.2 136 40.4
HanXRQChr02g0046641 Helianthus annuus HOM05D000198 ORTHO05D005702 1.7e-12 77.4 82 56.1
DCAR_017462 Daucus carota HOM05D005708 ORTHO05D007371 6.6e-12 75.5 99 45.5
CBR_g12684 Chara braunii HOM05D000198 ORTHO05D005702 1.2e-10 71.2 103 41.7
CBR_g31884 Chara braunii HOM05D000198 ORTHO05D005702 1.2e-10 71.2 102 40.2
BcaC08g47505 Brassica carinata HOM05D000198 ORTHO05D005702 4.7e-10 69.3 137 38.0
CBR_g12541 Chara braunii HOM05D000198 ORTHO05D005702 1.1e-09 68.2 135 36.3
Pp3c6_27580 Physcomitrium patens HOM05D000198 ORTHO05D005702 9.0e-09 65.1 102 37.3
BraA02t07284Z Brassica rapa HOM05D000198 ORTHO05D042445 1.2e-08 64.7 89 43.8
HanXRQChr01g0005221 Helianthus annuus HOM05D000198 ORTHO05D005702 1.5e-08 64.3 45 66.7
HanXRQChr12g0370121 Helianthus annuus HOM05D000198 ORTHO05D005702 1.5e-08 64.3 45 66.7
MCO16G663 Micromonas commoda HOM05D000198 ORTHO05D005702 2.6e-08 63.5 100 39.0
DCAR_028611 Daucus carota HOM05D000198 ORTHO05D005702 3.4e-08 63.2 62 51.6
Cre08.g381702 Chlamydomonas reinhardtii HOM05D000198 ORTHO05D005702 5.8e-08 62.4 102 37.3
PRCOL_00006022 Prasinoderma coloniale HOM05D000198 ORTHO05D005702 2.2e-07 60.5 86 43.0
A02p22830 Brassica napus HOM05D000198 ORTHO05D042445 3.8e-07 59.7 106 37.7
Cfa027216 Carpinus fangiana HOM05D000198 ORTHO05D005702 3.8e-07 59.7 102 34.3
Ca_29316_v3 Cicer arietinum L. HOM05D000198 ORTHO05D003365 4.9e-07 59.3 102 35.3
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 3.2e-06 56.6 84 41.7


User provided reference genes

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