Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 0.0e+00 1637.9 1104 100.0
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 0.0e+00 1537.7 1103 94.9
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 0.0e+00 1126.3 1112 77.4
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 0.0e+00 1125.2 1108 77.5
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 0.0e+00 1122.5 1115 76.9
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 0.0e+00 1118.2 1110 77.7
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 0.0e+00 1098.6 1114 76.4
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 0.0e+00 1097.4 1110 76.4
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 0.0e+00 1090.9 1111 76.5
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 0.0e+00 1090.5 1114 76.1
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 0.0e+00 1087.4 1114 75.9
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.7e-309 1066.2 1133 74.2
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.0e-307 1059.3 1110 73.8
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 9.4e-305 1050.4 1113 75.5
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 2.4e-300 1035.8 1109 74.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.7e-299 1032.3 1110 73.0
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.0e-295 1020.4 1113 72.2
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 4.4e-294 1015.0 1108 72.1
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 6.3e-293 1011.1 1112 71.0
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 6.3e-293 1011.1 1112 71.0
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.4e-292 1010.0 1105 74.2
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 5.4e-292 1008.1 1109 72.9
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1106 73.1
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 3.3e-289 998.8 1110 69.8
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.6e-288 996.5 1105 71.1
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 8.0e-288 994.2 1108 72.5
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.5e-286 989.9 1108 72.1
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 3.4e-286 988.8 1109 69.4
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 1.3e-285 986.9 1112 72.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.7e-285 986.5 1116 69.9
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 6.4e-285 984.6 1110 72.5
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 9.2e-284 980.7 1113 70.0
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 9.2e-284 980.7 1108 70.3
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.7e-283 979.2 1123 69.2
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.0e-282 977.2 1107 69.4
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.7e-282 976.5 1104 69.4
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.3e-282 976.1 1108 69.0
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 8.6e-282 974.2 1110 70.1
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.9e-281 973.0 1107 69.5
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.3e-281 972.2 1110 69.3
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 1.2e-280 970.3 1123 69.7
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 8.0e-280 967.6 1107 71.4
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 9.8e-278 960.7 1106 72.2
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.7e-277 959.9 1106 72.1
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.7e-275 952.6 1110 68.1
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.5e-275 952.2 1116 69.3
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.2e-272 943.7 1110 69.2
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.2e-270 937.2 1093 71.1
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.2e-270 937.2 1109 67.7
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 4.4e-270 935.3 1105 67.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.4e-268 930.2 1105 70.9
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.4e-268 929.5 1111 68.2
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.6e-267 926.8 1105 58.9
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 2.1e-267 926.4 1102 70.2
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 4.6e-267 925.2 1100 68.3
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 9.5e-265 917.5 1113 66.9
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.1e-263 914.1 1109 67.4
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 2.6e-262 909.4 1109 70.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 3.4e-262 909.1 1107 68.7
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 4.4e-262 908.7 1107 68.5
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 7.6e-262 907.9 1111 66.6
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 8.4e-261 904.4 1112 65.8
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 8.4e-261 904.4 1110 68.6
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.9e-260 903.3 1103 67.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 3.2e-260 902.5 1116 66.8
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 7.1e-260 901.4 1103 68.2
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 5.1e-258 895.2 1112 65.5
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.9e-257 893.3 1117 65.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 7.3e-257 891.3 1117 65.9
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.6e-256 890.2 1110 66.2
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 9.0e-255 884.4 1104 67.8
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 3.4e-254 882.5 1105 66.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.3e-253 880.6 1113 65.5
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 4.6e-251 872.1 1121 60.6
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 6.0e-251 871.7 1108 65.1
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 3.0e-250 869.4 1107 64.8
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 4.3e-249 865.5 1118 61.7
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 5.6e-249 865.1 1259 47.0
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.5e-246 857.1 1107 64.4
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.6e-243 847.0 1115 64.6
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.1e-243 846.7 1116 65.1
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 2.7e-243 846.3 1106 64.1
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.0e-242 844.3 1193 45.4
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 3.0e-242 842.8 1111 65.3
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 5.6e-241 838.6 1105 65.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 6.2e-240 835.1 1078 65.6
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.2e-240 835.1 485 82.7
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 5.8e-238 828.6 1107 65.0
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.7e-235 819.7 900 75.1
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 3.5e-235 819.3 1112 65.1
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.1e-232 810.1 971 73.4
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.1e-225 787.7 486 77.2
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.4e-223 780.0 487 77.0
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.9e-220 770.4 485 75.1
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.2e-212 743.0 815 65.5
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 3.9e-210 736.1 1033 58.5
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.7e-209 732.3 1103 54.9
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 1.0e-205 721.5 1105 57.0
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.2e-203 714.5 486 70.8
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 3.2e-188 663.3 1104 58.2
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 4.0e-186 656.4 955 66.3
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 4.9e-176 622.9 483 63.8
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 3.3e-164 583.6 1034 52.6
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 6.0e-158 562.8 899 66.4
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.6e-139 501.5 442 58.4
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.6e-139 501.5 834 67.7
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.4e-130 471.1 481 49.9
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 6.0e-126 456.4 478 49.4
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 9.3e-111 406.0 253 73.9
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 7.9e-102 376.3 736 59.2
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 3.4e-97 360.9 537 37.6
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.2e-95 354.4 495 44.2
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.7e-91 340.9 202 78.2
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 5.3e-90 337.0 394 52.8
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.1e-87 329.3 205 74.1
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 2.2e-80 305.1 394 48.0
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 6.5e-72 276.9 453 36.0
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 3.4e-68 264.6 359 47.6
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-66 259.2 494 36.8
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-66 257.3 265 54.3
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 5.4e-66 257.3 393 44.3
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 3.6e-62 244.6 165 72.7
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.1e-55 223.0 206 59.7
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 4.0e-45 188.0 99 85.9
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 3.0e-40 171.8 133 60.2
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 8.6e-40 170.2 140 61.4
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.5e-39 169.5 140 61.4
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.5e-39 168.7 112 75.9
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 4.0e-37 161.4 123 69.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.0e-36 159.1 93 81.7
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.3e-35 156.4 93 77.4
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.4e-34 152.9 186 47.3
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 6.2e-30 137.5 93 69.9
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.5e-28 132.9 83 80.7
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.9e-27 127.9 186 45.7
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.1e-26 124.0 79 72.2
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 5.1e-24 117.9 105 60.0
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.8e-21 109.4 129 47.3
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.8e-14 85.5 120 40.0
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 1.3e-11 76.6 187 28.3
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 8.7e-08 63.9 43 74.4
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-07 62.8 92 44.6
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.9e-07 62.8 48 50.0
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 4.3e-07 61.6 146 32.9
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 2.1e-06 59.3 39 71.8


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