Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 3.0e-170 601.7 285 100.0
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.2e-134 483.4 236 94.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 8.0e-123 444.1 268 73.5
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.6e-115 418.7 265 70.9
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 6.1e-115 417.9 278 68.3
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 8.0e-115 417.5 268 71.3
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 6.8e-114 414.5 270 70.0
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 6.3e-112 407.9 271 68.3
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 4.1e-111 405.2 278 66.9
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.4e-111 404.8 286 65.4
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.6e-110 403.3 267 68.9
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 5.9e-110 401.4 266 68.8
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.9e-109 399.1 278 65.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 5.0e-109 398.3 266 66.5
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 6.6e-109 397.9 266 66.2
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 8.6e-109 397.5 265 67.9
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.3e-108 395.2 283 65.0
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 2.8e-107 392.5 272 66.9
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.8e-106 389.8 274 64.6
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.3e-106 389.4 267 64.0
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 6.8e-106 387.9 267 63.7
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.2e-105 387.1 267 66.3
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 4.4e-105 385.2 264 67.8
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.7e-104 383.3 267 63.7
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 4.9e-104 381.7 266 64.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.1e-103 380.6 267 62.5
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.2e-102 377.1 268 63.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 2.0e-102 376.3 271 63.1
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 4.6e-102 375.2 273 61.2
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 6.0e-102 374.8 274 62.4
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 7.8e-102 374.4 273 61.5
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.7e-101 373.2 274 62.0
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 2.3e-101 372.9 267 62.2
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.1e-100 370.5 271 61.3
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.1e-100 370.5 271 61.3
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.1e-100 370.5 272 60.7
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.5e-100 370.2 244 68.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.9e-100 369.8 271 61.6
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.6e-99 366.7 271 60.9
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 1.6e-99 366.7 274 59.9
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 1.4e-98 363.6 267 59.6
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.8e-98 363.2 281 57.3
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 7.5e-97 357.8 264 61.7
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 1.7e-96 356.7 266 62.4
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.2e-96 356.3 279 59.5
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 3.7e-96 355.5 237 66.7
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 1.1e-95 354.0 266 60.2
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 4.1e-95 352.1 281 59.8
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.2e-94 350.5 264 60.2
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.7e-93 346.7 268 58.6
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.6e-92 341.7 274 58.8
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.4e-90 337.0 273 53.5
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 4.9e-88 328.6 243 60.5
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 8.3e-88 327.8 269 56.5
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.6e-86 323.6 249 59.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 5.6e-84 315.1 267 53.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-83 313.9 309 51.5
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 6.2e-83 311.6 242 58.7
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 4.0e-82 308.9 275 53.1
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.9e-80 302.0 265 49.1
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.1e-77 292.0 223 57.4
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 5.6e-76 288.5 216 60.2
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 8.1e-75 284.6 262 49.2
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 8.1e-67 258.1 204 57.8
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 6.9e-66 255.0 218 56.4
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 3.2e-63 246.1 270 44.4
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 7.9e-62 241.5 183 59.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 2.5e-60 236.5 265 40.8
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 4.3e-60 235.7 268 41.0
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.8e-58 230.3 201 54.2
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 6.9e-58 228.4 269 39.4
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 2.6e-57 226.5 212 49.1
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 2.5e-55 219.9 228 49.1
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 4.2e-55 219.2 348 35.6
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.8e-37 160.6 124 58.9
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 8.2e-35 151.8 108 63.9
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.1e-31 141.4 114 60.5
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 2.9e-24 116.7 67 71.6
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 1.8e-21 107.5 260 28.5
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 5.2e-21 105.9 176 34.7
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 5.5e-15 85.9 63 61.9
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 4.5e-09 66.2 93 37.6
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 7.7e-09 65.5 61 52.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.6e-06 57.8 45 60.0


User provided reference genes

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