Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 4.7e-267 924.5 671 100.0
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 4.6e-254 881.3 676 96.6
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.9e-240 835.5 676 93.0
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 1.1e-215 753.8 669 87.1
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 5.7e-196 688.3 675 81.8
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 6.3e-195 684.9 672 81.2
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 9.1e-194 681.0 670 80.1
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 4.5e-193 678.7 670 80.4
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.7e-192 676.8 670 81.5
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 6.6e-192 674.9 675 81.0
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 8.6e-192 674.5 674 81.9
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 4.7e-190 668.7 673 81.0
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.0e-189 667.5 669 79.7
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.2e-188 664.1 669 80.6
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 2.0e-188 663.3 679 79.8
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 6.3e-187 658.3 670 80.7
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 1.8e-186 656.8 670 79.4
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 3.1e-186 656.0 671 79.1
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 4.1e-186 655.6 672 78.7
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 1.6e-185 653.7 670 79.1
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 2.7e-185 652.9 670 79.4
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 1.0e-184 651.0 670 78.8
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 5.0e-184 648.7 677 78.6
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.1e-183 647.5 671 79.6
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 1.5e-183 647.1 678 78.9
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 1.5e-183 647.1 670 78.7
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.9e-183 646.7 684 77.8
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 7.3e-183 644.8 459 72.1
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 9.5e-183 644.4 685 77.8
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 1.2e-182 644.0 670 78.4
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.6e-182 643.7 673 77.9
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 2.1e-182 643.3 669 78.3
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 2.8e-182 642.9 670 77.9
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 4.7e-182 642.1 670 78.2
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 4.7e-182 642.1 671 78.1
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 6.8e-181 638.3 462 73.6
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 4.4e-180 635.6 458 72.9
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 5.8e-180 635.2 669 78.9
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 4.9e-179 632.1 672 77.5
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 8.3e-179 631.3 458 70.1
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 1.4e-178 630.6 669 77.7
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.4e-178 629.8 455 72.7
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 3.2e-178 629.4 670 77.2
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 1.6e-177 627.1 467 71.5
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 7.8e-177 624.8 672 77.7
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 1.7e-176 623.6 464 71.6
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 3.0e-176 622.9 670 77.2
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 5.0e-176 622.1 672 77.8
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 8.6e-176 621.3 666 76.9
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 9.5e-175 617.8 673 77.1
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 2.1e-174 616.7 678 76.4
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 3.6e-174 615.9 678 76.1
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 1.8e-173 613.6 673 76.7
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 4.0e-173 612.5 458 70.5
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 5.2e-173 612.1 666 77.9
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 5.8e-172 608.6 667 77.4
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 1.3e-171 607.4 665 76.7
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 2.9e-171 606.3 672 75.6
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 6.4e-171 605.1 676 76.3
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 8.3e-171 604.7 667 77.1
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 1.9e-170 603.6 670 76.1
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 4.1e-170 602.4 670 76.0
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 4.1e-170 602.4 679 76.3
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 2.1e-169 600.1 474 68.4
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 2.7e-169 599.7 689 74.7
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 3.5e-169 599.4 661 73.1
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 4.6e-169 599.0 670 76.0
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 1.3e-168 597.4 670 75.8
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 1.9e-167 593.6 463 68.5
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 1.9e-167 593.6 709 73.2
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 5.6e-167 592.0 670 75.2
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 7.3e-167 591.7 670 75.2
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 5.8e-164 582.0 668 74.0
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 8.3e-163 578.2 671 75.1
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 8.3e-163 578.2 573 85.9
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 1.2e-161 574.3 670 74.6
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 2.1e-161 573.5 670 74.3
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 1.3e-160 570.9 671 73.8
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.2e-158 564.3 463 64.4
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.6e-158 563.9 622 77.2
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 2.8e-158 563.1 671 74.2
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.8e-157 560.5 670 72.5
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 2.6e-156 556.6 458 63.8
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 4.4e-156 555.8 458 64.8
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 5.8e-156 555.4 671 72.9
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 9.9e-156 554.7 457 64.1
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 5.4e-154 548.9 457 63.7
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 2.7e-153 546.6 460 64.6
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 3.5e-153 546.2 671 72.3
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 3.5e-153 546.2 399 71.2
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.3e-152 544.3 459 62.5
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 1.7e-152 543.9 671 72.4
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.3e-151 539.7 457 63.9
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 4.3e-151 539.3 359 77.2
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 3.1e-149 533.1 459 63.6
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 5.3e-149 532.3 455 60.7
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 9.0e-149 531.6 579 54.4
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 7.6e-148 528.5 442 64.7
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 2.4e-146 523.5 726 64.3
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 1.2e-145 521.2 463 63.7
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 6.0e-145 518.8 456 60.5
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.3e-144 517.7 577 80.6
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 2.0e-140 503.8 386 69.7
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 1.2e-132 478.0 571 76.2
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 1.9e-127 460.7 671 67.8
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.4e-122 444.5 418 58.4
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 2.4e-117 427.2 706 63.3
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 4.2e-114 416.4 356 64.6
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 1.6e-113 414.5 474 48.9
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 7.9e-113 412.1 462 50.4
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 2.8e-110 403.7 318 69.2
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 7.9e-105 385.6 293 72.4
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 3.0e-104 383.6 279 71.3
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 3.3e-103 380.2 400 51.5
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.0e-76 291.2 668 57.5
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 9.8e-71 272.3 389 47.8
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 2.3e-64 251.1 194 69.1
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 1.6e-60 238.4 399 46.6
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 2.3e-59 234.6 464 35.3
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 7.3e-58 229.6 576 48.1
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 2.9e-54 217.6 142 79.6
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 1.6e-52 211.8 146 74.0
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 2.5e-50 204.5 278 49.3
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 5.6e-50 203.4 482 30.7
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 8.9e-48 196.1 166 58.4
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 4.4e-47 193.7 193 49.2
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 7.6e-47 193.0 143 67.1
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 4.1e-45 187.2 532 28.6
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.4e-40 171.4 124 66.1
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.4e-40 171.4 160 60.6
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 4.6e-36 157.1 290 38.3
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 1.0e-35 156.0 147 54.4
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 6.6e-35 153.3 120 67.5
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.6e-33 148.7 150 55.3
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 2.4e-32 144.8 294 89.5
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 6.9e-32 143.3 281 43.1
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 5.1e-19 100.5 66 71.2
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 7.4e-18 96.7 514 24.3
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 3.1e-16 91.3 110 49.1
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.0e-15 88.6 59 66.1
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.5e-15 87.4 75 53.3
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 5.5e-13 80.5 84 51.2
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 3.0e-11 74.7 54 74.1
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 2.5e-10 71.6 186 33.3
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 7.4e-10 70.1 504 23.8
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 9.6e-10 69.7 46 78.3
Dinv40325 Davidia involucrata HOM05D004632 ORTHO05D005556 3.4e-07 61.2 37 78.4
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.4e-07 61.2 54 63.0
Actinidia36729 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.6e-07 60.1 135 33.3
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 7.6e-07 60.1 45 66.7
Os07g0205200 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 2.9e-06 58.2 84 42.9


User provided reference genes

Program Settings