Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0181600 Salix brachista HOM05D001435 ORTHO05D001304 1.8e-69 266.2 170 100.0
Potri.006G233100 Populus trichocarpa HOM05D001435 ORTHO05D001304 8.3e-35 151.0 91 86.8
Potri.018G059200 Populus trichocarpa HOM05D001435 ORTHO05D001304 4.7e-22 108.6 138 63.0
COL.COLO4_21025 Corchorus olitorius HOM05D001435 ORTHO05D001304 3.4e-20 102.4 148 46.6
Gohir.A05G044000 Gossypium hirsutum HOM05D001435 ORTHO05D001304 3.8e-19 99.0 135 48.1
Gohir.D05G045600 Gossypium hirsutum HOM05D001435 ORTHO05D001304 2.4e-18 96.3 135 46.7
Gorai.009G047000 Gossypium raimondii HOM05D001435 ORTHO05D001304 2.4e-18 96.3 135 47.4
Thecc.09G050800 Theobroma cacao HOM05D001435 ORTHO05D001304 2.4e-18 96.3 135 48.1
Duzib150G0044 Durio zibethinus HOM05D001435 ORTHO05D001304 7.1e-18 94.7 135 48.9
Gohir.D07G023100 Gossypium hirsutum HOM05D001435 ORTHO05D001304 4.6e-17 92.0 139 46.0
PGR044G0779 Punica granatum HOM05D001435 ORTHO05D001304 4.6e-17 92.0 130 46.2
Gorai.001G023800 Gossypium raimondii HOM05D001435 ORTHO05D001304 2.3e-16 89.7 139 45.3
Gohir.A07G022148 Gossypium hirsutum HOM05D001435 ORTHO05D001304 3.9e-16 89.0 139 44.6
Duzib168G0652 Durio zibethinus HOM05D001435 ORTHO05D001304 2.5e-15 86.3 135 53.3
Cfa017930 Carpinus fangiana HOM05D001435 ORTHO05D001304 3.3e-15 85.9 148 45.3
Duzib187G1149 Durio zibethinus HOM05D001435 ORTHO05D001304 2.1e-14 83.2 137 51.1
Manes.03G046400 Manihot esculenta HOM05D001435 ORTHO05D001304 2.1e-14 83.2 116 49.1
Manes.16G077700 Manihot esculenta HOM05D001435 ORTHO05D001304 2.1e-14 83.2 116 49.1
TWI63G1359 Tripterygium wilfordii HOM05D001435 ORTHO05D001304 4.8e-14 82.0 129 41.1
RcHm_v2.0_Chr6g0310471 Rosa chinensis HOM05D001435 ORTHO05D001304 6.2e-14 81.6 132 43.2
Ciclev10009045m.g Citrus clementina HOM05D001435 ORTHO05D001304 1.4e-13 80.5 118 48.3
Haze_18219 Corylus avellana HOM05D001435 ORTHO05D001304 1.4e-13 80.5 145 44.8
CSS0047607 Camellia sinensis var. sinensis HOM05D001435 ORTHO05D001304 3.1e-13 79.3 85 55.3
Actinidia30299 Actinidia chinensis HOM05D001435 ORTHO05D001304 4.0e-13 79.0 108 47.2
GSVIVG01035342001 Vitis vinifera HOM05D001435 ORTHO05D001304 5.3e-13 78.6 93 53.8
Actinidia01205 Actinidia chinensis HOM05D000927 ORTHO05D000850 6.9e-13 78.2 111 45.0
FAN24G1394 Fragaria x ananassa HOM05D001435 ORTHO05D001304 6.9e-13 78.2 134 41.8
FAN15G3292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 9.0e-13 77.8 132 40.9
FAN27G2292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 9.0e-13 77.8 132 40.9
FvH4_2g32200 Fragaria vesca HOM05D001435 ORTHO05D001304 1.2e-12 77.4 132 41.7
arahy.Tifrunner.gnm1.ann1.BT0S58 Arachis hypogaea HOM05D001435 ORTHO05D001304 1.5e-12 77.0 136 46.3
Glyma.06G050600 Glycine max HOM05D001435 ORTHO05D001304 1.5e-12 77.0 121 47.9
MELO3C010764.2 Cucumis melo HOM05D001435 ORTHO05D001304 2.0e-12 76.6 134 44.8
Sed0022728 Sechium edule HOM05D001435 ORTHO05D001304 2.0e-12 76.6 113 46.9
CsaV3_2G025700 Cucumis sativus L. HOM05D001435 ORTHO05D001304 2.6e-12 76.3 134 44.0
QL02p001657 Quercus lobata HOM05D001435 ORTHO05D001304 2.6e-12 76.3 94 51.1
VMungo1309G0835 Vigna mungo HOM05D001435 ORTHO05D001304 3.4e-12 75.9 84 56.0
Lalb_Chr11g0063091 Lupinus albus HOM05D001435 ORTHO05D001304 4.5e-12 75.5 63 61.9
Atru.chr7.2022 Acer truncatum HOM05D001435 ORTHO05D001304 5.8e-12 75.1 56 66.1
Lj7A282T45 Lonicera japonica HOM05D001435 ORTHO05D001304 5.8e-12 75.1 89 50.6
Prupe.1G415100 Prunus persica HOM05D001435 ORTHO05D001304 5.8e-12 75.1 133 42.9
Glyma.04G050000 Glycine max HOM05D001435 ORTHO05D001304 7.6e-12 74.7 85 55.3
ClCG05G017720 Citrullus lanatus HOM05D001435 ORTHO05D001304 1.3e-11 73.9 128 42.2
Phvul.009G075900 Phaseolus vulgaris HOM05D001435 ORTHO05D001304 2.2e-11 73.2 98 50.0
TPR.G13008 Trifolium pratense HOM05D001435 ORTHO05D001304 2.9e-11 72.8 91 46.2
CSS0005800 Camellia sinensis var. sinensis HOM05D001435 ORTHO05D001304 3.8e-11 72.4 61 63.9
CANSAT25G0463 Cannabis sativa HOM05D001435 ORTHO05D001304 3.8e-11 72.4 76 56.6
Lj1g0027715 Lotus japonicus HOM05D001435 ORTHO05D001304 3.8e-11 72.4 63 65.1
TWI34G0225 Tripterygium wilfordii HOM05D001435 ORTHO05D001304 4.9e-11 72.0 85 51.8
FAN20G1683 Fragaria x ananassa HOM05D001435 ORTHO05D001304 6.4e-11 71.6 134 39.6
ClCG08G016910 Citrullus lanatus HOM05D001435 ORTHO05D001304 8.4e-11 71.2 137 41.6
Lalb_Chr14g0367871 Lupinus albus HOM05D001435 ORTHO05D001304 8.4e-11 71.2 138 47.1
arahy.Tifrunner.gnm1.ann1.R3WVNU Arachis hypogaea HOM05D001435 ORTHO05D001304 1.4e-10 70.5 137 48.2
CiPaw.15G042000 Carya illinoinensis HOM05D001435 ORTHO05D001304 1.4e-10 70.5 128 47.7
Dinv27963 Davidia involucrata HOM05D001435 ORTHO05D001304 1.4e-10 70.5 61 62.3
Medtr1g016800 Medicago truncatula HOM05D001435 ORTHO05D001304 1.4e-10 70.5 112 42.0
SalBow4G2002 Salvia bowleyana HOM05D001435 ORTHO05D001304 1.4e-10 70.5 88 46.6
Hma1.2p1_1266F.1_g271400 Hydrangea macrophylla HOM05D001435 ORTHO05D001304 1.9e-10 70.1 103 46.6
Nitab4.5_0006311g0010 Nicotiana tabacum HOM05D001435 ORTHO05D001304 1.9e-10 70.1 92 47.8
TAR383G0608 Trochodendron aralioides HOM05D001435 ORTHO05D001304 1.9e-10 70.1 43 81.4
MSTRG.25937 Avicennia marina HOM05D001435 ORTHO05D001304 9.3e-10 67.8 89 44.9
Sed0000349 Sechium edule HOM05D001435 ORTHO05D001304 1.2e-09 67.4 142 38.7
Lalb_Chr22g0355981 Lupinus albus HOM05D001435 ORTHO05D001304 1.6e-09 67.0 128 42.2
Sc09g0009650 Simmondsia chinensis HOM05D001435 ORTHO05D001304 1.6e-09 67.0 82 52.4
Ca_13182_v3 Cicer arietinum L. HOM05D001435 ORTHO05D001304 2.1e-09 66.6 87 49.4
MELO3C016856.2 Cucumis melo HOM05D001435 ORTHO05D001304 1.0e-08 64.3 157 38.2
Migut.A00156 Erythranthe guttata HOM05D001435 ORTHO05D001304 1.0e-08 64.3 93 46.2
CsaV3_4G035460 Cucumis sativus L. HOM05D001435 ORTHO05D001304 1.3e-08 63.9 129 38.8
Oeu029403.1 Olea europaea HOM05D001435 ORTHO05D001304 3.0e-08 62.8 89 43.8
Oeu036352.1 Olea europaea HOM05D001435 ORTHO05D001304 3.0e-08 62.8 112 39.3
Lalb_Chr08g0245121 Lupinus albus HOM05D001435 ORTHO05D001304 6.7e-08 61.6 56 58.9
MBI01_g16590_MAGBIO Magnolia biondii HOM05D001435 ORTHO05D001304 6.7e-08 61.6 64 54.7
SalBow1G0862 Salvia bowleyana HOM05D001435 ORTHO05D001304 8.7e-08 61.2 124 40.3
MSTRG.14044 Avicennia marina HOM05D001435 ORTHO05D001304 1.1e-07 60.8 86 46.5
DCAR_000780 Daucus carota HOM05D001435 ORTHO05D001304 1.5e-07 60.5 58 62.1
Oeu057698.1 Olea europaea HOM05D001435 ORTHO05D001304 1.5e-07 60.5 104 42.3
Psat6g018840 Pisum sativum HOM05D001435 ORTHO05D001304 2.5e-07 59.7 60 53.3
Nn6g35391 Nelumbo nucifera HOM05D001435 ORTHO05D001304 3.3e-07 59.3 91 46.2
Sed0009703 Sechium edule HOM05D001435 ORTHO05D001304 4.3e-07 58.9 164 34.8
Rhsim11G0047300 Rhododendron simsii HOM05D001435 ORTHO05D001304 5.6e-07 58.5 90 47.8
Ah.10g034610 Amaranthus hybridus HOM05D000927 ORTHO05D000850 9.6e-07 57.8 50 54.0
Nn8g38956 Nelumbo nucifera HOM05D000927 ORTHO05D000850 1.6e-06 57.0 94 40.4
MSTRG.11673 Avicennia marina HOM05D001435 ORTHO05D001304 3.7e-06 55.8 72 48.6
Migut.E01554 Erythranthe guttata HOM05D001435 ORTHO05D001304 4.8e-06 55.5 51 56.9
SGA_v2.0_scaffold169G38680 Striga asiatica HOM05D001435 ORTHO05D001304 6.2e-06 55.1 115 38.3


User provided reference genes

Program Settings