Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 3.6e-242 841.3 453 100.0
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 5.8e-160 568.2 392 73.2
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 7.4e-155 551.2 450 65.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 9.0e-145 517.7 392 68.1
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 7.9e-141 504.6 392 63.3
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 2.8e-138 496.1 392 66.8
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 2.0e-136 490.0 392 62.5
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 4.5e-136 488.8 392 60.7
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 5.5e-134 481.9 312 71.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.3e-132 476.5 392 61.5
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.1e-131 474.2 382 60.5
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.8e-130 469.5 391 59.6
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.3e-129 465.3 387 58.4
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 9.1e-129 464.5 392 59.7
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 9.1e-129 464.5 392 59.9
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 5.9e-128 461.8 307 68.7
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 7.7e-128 461.5 387 58.1
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.0e-127 461.1 387 58.1
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.3e-127 460.7 392 57.9
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.2e-127 459.9 387 57.9
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 7.2e-126 454.9 392 58.7
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 2.1e-125 453.4 392 57.9
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 3.6e-125 452.6 392 57.7
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 3.6e-125 452.6 388 57.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.7e-125 452.2 386 58.8
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 2.3e-124 449.9 392 57.4
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 6.7e-124 448.4 308 66.6
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 8.8e-124 448.0 377 57.0
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 2.0e-123 446.8 387 58.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.7e-123 445.3 392 56.9
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.7e-122 443.7 393 57.3
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.7e-122 442.6 392 56.9
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 6.3e-122 441.8 392 56.9
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 6.3e-122 441.8 384 57.8
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 4.1e-121 439.1 392 54.8
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 7.0e-121 438.3 392 56.9
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.2e-120 437.6 392 57.9
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 5.9e-120 435.3 361 59.3
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.0e-119 432.2 392 57.1
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 1.1e-118 431.0 388 56.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.5e-118 430.6 378 56.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.9e-118 430.3 392 54.3
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.9e-118 430.3 388 56.2
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.5e-118 429.9 393 56.0
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 2.5e-118 429.9 388 56.4
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 3.2e-118 429.5 383 56.1
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 5.5e-118 428.7 392 54.8
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 1.6e-117 427.2 390 56.2
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 2.3e-116 423.3 322 62.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 2.3e-116 423.3 323 62.2
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.5e-115 420.6 323 62.8
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 2.0e-115 420.2 388 53.1
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.6e-115 419.9 393 54.7
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.6e-115 419.9 390 54.9
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 4.4e-115 419.1 392 54.8
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 9.7e-115 417.9 392 53.3
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 9.7e-115 417.9 392 54.3
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.2e-114 416.8 392 55.6
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.1e-113 414.5 380 53.7
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.3e-113 412.1 394 52.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 3.5e-112 409.5 384 52.1
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 1.3e-111 407.5 394 53.0
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.3e-111 407.5 392 51.8
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.2e-111 406.8 308 62.0
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.2e-111 406.8 384 52.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 8.5e-111 404.8 384 52.3
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.9e-110 403.7 310 61.6
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 4.2e-110 402.5 385 53.2
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 5.5e-110 402.1 385 53.2
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.7e-109 399.8 377 53.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 4.7e-109 399.1 392 52.0
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 3.0e-108 396.4 389 51.7
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 8.8e-108 394.8 394 52.0
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 3.4e-107 392.9 394 51.5
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 5.7e-107 392.1 382 54.5
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 5.7e-107 392.1 367 54.0
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 9.8e-107 391.3 388 49.7
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.7e-106 390.6 310 60.6
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.7e-106 389.4 250 72.0
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 3.7e-106 389.4 391 53.5
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 6.3e-106 388.7 379 50.9
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.1e-105 387.9 405 50.6
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.8e-105 387.1 384 53.6
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.1e-105 386.3 392 51.5
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.1e-105 386.0 384 50.3
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 5.4e-105 385.6 384 50.0
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 7.0e-105 385.2 310 57.7
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.6e-104 384.0 391 52.2
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 2.0e-104 383.6 271 65.7
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.0e-104 383.6 392 49.7
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 5.9e-104 382.1 389 51.7
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 2.3e-103 380.2 387 51.9
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 2.3e-103 380.2 392 50.0
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.9e-103 379.8 392 51.3
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 5.0e-103 379.0 328 55.5
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.5e-102 377.5 386 49.7
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.9e-102 377.1 387 51.4
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.9e-102 377.1 389 51.2
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.2e-101 374.4 387 51.2
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.8e-101 373.2 387 51.2
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-100 370.5 384 49.7
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 4.0e-100 369.4 368 49.7
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.6e-99 366.7 392 49.7
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.2e-98 363.6 312 56.4
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.4e-97 360.9 392 49.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.8e-97 360.5 376 47.6
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 4.1e-97 359.4 374 47.9
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 4.1e-97 359.4 358 50.3
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 3.5e-96 356.3 358 49.2
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 7.8e-96 355.1 374 49.5
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 1.7e-95 354.0 392 46.7
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 5.0e-95 352.4 384 49.0
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 6.6e-95 352.1 384 48.4
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.9e-94 350.5 384 48.4
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.5e-94 350.1 385 48.3
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 5.6e-94 349.0 384 48.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.8e-93 346.7 384 49.2
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 4.7e-93 345.9 384 47.9
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 6.1e-93 345.5 316 51.3
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.4e-92 344.4 387 47.3
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.4e-92 344.4 393 48.1
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 8.9e-92 341.7 227 70.0
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.9e-90 335.9 380 47.1
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.1e-89 334.7 377 48.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.2e-89 333.2 380 46.8
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.0e-88 330.5 380 46.6
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.7e-87 327.4 386 45.9
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 5.0e-87 325.9 318 51.3
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 1.1e-86 324.7 288 54.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 9.5e-86 321.6 386 44.8
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 2.8e-85 320.1 385 45.2
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 2.8e-85 320.1 385 45.2
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 3.6e-85 319.7 384 44.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.4e-84 317.8 312 52.2
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.0e-84 316.2 311 52.1
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 3.4e-83 313.2 385 44.4
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 2.3e-79 300.4 310 47.4
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.9e-79 299.7 383 43.6
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-78 298.1 296 49.7
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.1e-68 265.0 375 39.2
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 6.4e-66 255.8 314 44.6
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.6e-64 251.1 298 43.3
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.7e-64 250.4 368 36.4
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 8.7e-63 245.4 264 49.2
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.9e-62 244.2 358 36.6
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.1e-61 240.7 362 36.7
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.5e-59 234.6 382 35.6
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.5e-59 234.6 261 44.1
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.6e-59 232.3 382 35.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.0e-55 220.3 210 48.1
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 3.9e-55 219.9 355 34.9
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.6e-53 214.5 204 51.0
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.1e-53 214.2 271 37.6
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.8e-53 213.8 263 37.6
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 6.2e-53 212.6 266 34.6
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.8e-52 211.1 309 34.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.6e-48 196.4 263 37.3
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.6e-48 196.4 263 37.3
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.9e-46 191.0 137 64.2
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.8e-45 186.4 236 47.0
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.0e-44 183.3 166 48.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.2e-41 173.7 176 46.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.1e-41 172.6 118 66.9
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.4e-35 153.7 111 62.2
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.5e-33 147.5 166 45.8
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.6e-32 144.8 170 47.6
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.7e-30 135.6 168 40.5
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.9e-26 124.0 225 32.0
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.9e-26 124.0 82 65.9
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.1e-24 117.9 117 50.4
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 2.9e-18 97.4 239 25.5
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 3.8e-18 97.1 76 60.5
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.2e-17 94.0 89 50.6
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 7.9e-16 89.4 60 66.7
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.5e-11 73.6 101 40.6
CBR_g4192 Chara braunii HOM05D000019 ORTHO05D022303 4.7e-08 63.5 96 33.3


User provided reference genes

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