Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0128600 Salix brachista HOM05D000091 ORTHO05D005533 1.1e-81 306.6 156 100.0
Sabra11G0073700 Salix brachista HOM05D000091 ORTHO05D005533 1.2e-43 180.3 113 87.6
Sabra06G0147100 Salix brachista HOM05D000091 ORTHO05D005533 3.4e-43 178.7 113 86.7
Potri.013G159000 Populus trichocarpa HOM05D000091 ORTHO05D005533 8.4e-42 174.1 114 82.5
Sabra01G0097200 Salix brachista HOM05D000091 ORTHO05D005533 1.6e-40 169.9 113 83.2
Sabra13G0127600 Salix brachista HOM05D000091 ORTHO05D005533 3.0e-39 165.6 111 82.0
Potri.019G131600 Populus trichocarpa HOM05D000091 ORTHO05D005533 1.5e-38 163.3 113 78.8
Sabra19G0128400 Salix brachista HOM05D000091 ORTHO05D005533 1.1e-36 157.1 114 75.4
Gohir.A08G204100 Gossypium hirsutum HOM05D000091 ORTHO05D005533 4.2e-33 145.2 130 63.8
Gohir.D08G221400 Gossypium hirsutum HOM05D000091 ORTHO05D005533 5.5e-33 144.8 130 63.1
Gorai.004G235100 Gossypium raimondii HOM05D000091 ORTHO05D005533 5.5e-33 144.8 130 63.1
Atru.chr10.2349 Acer truncatum HOM05D000091 ORTHO05D005533 7.4e-30 134.4 115 65.2
GSVIVG01024542001 Vitis vinifera HOM05D000091 ORTHO05D005533 7.4e-30 134.4 108 67.6
Thecc.09G365300 Theobroma cacao HOM05D000091 ORTHO05D005533 2.2e-29 132.9 131 59.5
COL.COLO4_11224 Corchorus olitorius HOM05D000091 ORTHO05D005533 2.8e-29 132.5 135 57.8
Actinidia11633 Actinidia chinensis HOM05D000091 ORTHO05D005533 6.3e-29 131.3 111 68.5
Cpa.g.sc2.272 Carica papaya HOM05D000091 ORTHO05D005533 8.2e-29 131.0 111 67.6
Dinv12290 Davidia involucrata HOM05D000091 ORTHO05D005533 1.1e-28 130.6 110 70.0
Duzib168G0264 Durio zibethinus HOM05D000091 ORTHO05D005533 1.1e-28 130.6 114 60.5
Sabra14G0044900 Salix brachista HOM05D000091 ORTHO05D005533 1.8e-28 129.8 108 70.4
AUR62020714 Chenopodium quinoa HOM05D000091 ORTHO05D005533 4.1e-28 128.6 108 60.2
EL10Ac5g11739 Beta vulgaris HOM05D000091 ORTHO05D005533 5.3e-28 128.3 108 60.2
Manes.02G218100 Manihot esculenta HOM05D000091 ORTHO05D005533 5.3e-28 128.3 116 68.1
AUR62028008 Chenopodium quinoa HOM05D000091 ORTHO05D005533 6.9e-28 127.9 108 60.2
DCAR_018580 Daucus carota HOM05D000091 ORTHO05D005533 9.1e-28 127.5 114 65.8
Hund19361 Selenicereus undatus HOM05D000091 ORTHO05D005533 1.2e-27 127.1 110 66.4
SGA_v2.0_scaffold120G33001 Striga asiatica HOM05D000091 ORTHO05D005533 2.0e-27 126.3 111 64.9
Oeu022886.1 Olea europaea HOM05D000091 ORTHO05D005533 7.7e-27 124.4 109 66.1
Aqoxy4G03299 Aquilegia oxysepala HOM05D000091 ORTHO05D005533 1.0e-26 124.0 110 64.5
TWI79G1214 Tripterygium wilfordii HOM05D000091 ORTHO05D005533 1.3e-26 123.6 117 63.2
Ciclev10000673m.g Citrus clementina HOM05D000091 ORTHO05D005533 1.7e-26 123.2 120 61.7
Cc01_g15410 Coffea canephora HOM05D000091 ORTHO05D005533 1.7e-26 123.2 110 63.6
Sed0000462 Sechium edule HOM05D000091 ORTHO05D005533 1.7e-26 123.2 108 62.0
THA.LOC104800795 Tarenaya hassleriana HOM05D000091 ORTHO05D005533 1.7e-26 123.2 110 63.6
THA.LOC104826263 Tarenaya hassleriana HOM05D000091 ORTHO05D005533 1.7e-26 123.2 104 62.5
LjContig00141g0016392 Lotus japonicus HOM05D000091 ORTHO05D005533 2.9e-26 122.5 112 58.9
PGR119G0804 Punica granatum HOM05D000091 ORTHO05D005533 5.0e-26 121.7 109 57.8
TAR636G1853 Trochodendron aralioides HOM05D000091 ORTHO05D005533 5.0e-26 121.7 112 64.3
MSTRG.17922 Avicennia marina HOM05D000091 ORTHO05D005533 6.5e-26 121.3 109 60.6
Cfa011848 Carpinus fangiana HOM05D000091 ORTHO05D005533 6.5e-26 121.3 117 59.8
TAR636G2743 Trochodendron aralioides HOM05D000091 ORTHO05D005533 1.1e-25 120.6 112 63.4
CANSAT54G2963 Cannabis sativa HOM05D000091 ORTHO05D005533 1.4e-25 120.2 135 54.1
Dinv28748 Davidia involucrata HOM05D000091 ORTHO05D005533 1.4e-25 120.2 108 62.0
Eucgr.H02604 Eucalyptus grandis HOM05D000091 ORTHO05D005533 1.4e-25 120.2 108 58.3
PGSC0003DMG400011974 Solanum tuberosum HOM05D000091 ORTHO05D005533 5.5e-25 118.2 130 52.3
AT2G30520 Arabidopsis thaliana HOM05D000091 ORTHO05D005533 7.2e-25 117.9 109 60.6
Haze_24484 Corylus avellana HOM05D000091 ORTHO05D005533 7.2e-25 117.9 115 59.1
Hma1.2p1_0161F.1_g072060 Hydrangea macrophylla HOM05D000091 ORTHO05D005533 1.2e-24 117.1 100 57.0
Peaxi162Scf00455g00057 Petunia axillaris HOM05D000091 ORTHO05D005533 1.6e-24 116.7 127 58.3
AL4G25400 Arabidopsis lyrata HOM05D000091 ORTHO05D005533 3.6e-24 115.5 109 59.6
Carub.0004s1168 Capsella rubella HOM05D000091 ORTHO05D005533 3.6e-24 115.5 123 56.1
Migut.N00714 Erythranthe guttata HOM05D000091 ORTHO05D005533 3.6e-24 115.5 140 50.7
Nitab4.5_0002283g0030 Nicotiana tabacum HOM05D000091 ORTHO05D005533 3.6e-24 115.5 129 57.4
CAN.G123.1 Capsicum annuum HOM05D000091 ORTHO05D005533 4.7e-24 115.2 131 54.2
Hma1.2p1_0170F.1_g075320 Hydrangea macrophylla HOM05D000091 ORTHO05D005533 4.7e-24 115.2 106 56.6
Sc06g0001460 Simmondsia chinensis HOM05D000091 ORTHO05D005533 4.7e-24 115.2 109 60.6
Sopen07g022670 Solanum pennellii HOM05D000091 ORTHO05D005533 4.7e-24 115.2 130 51.5
CsaV3_4G007290 Cucumis sativus L. HOM05D000091 ORTHO05D005533 6.1e-24 114.8 131 53.4
CiPaw.13G062100 Carya illinoinensis HOM05D000091 ORTHO05D005533 7.9e-24 114.4 111 57.7
Solyc07g043130.3 Solanum lycopersicum HOM05D000091 ORTHO05D005533 7.9e-24 114.4 130 51.5
MELO3C016232.2 Cucumis melo HOM05D000091 ORTHO05D005533 1.0e-23 114.0 131 52.7
Nitab4.5_0000311g0030 Nicotiana tabacum HOM05D000091 ORTHO05D005533 1.0e-23 114.0 129 56.6
BcaB01g04097 Brassica carinata HOM05D000091 ORTHO05D005533 1.4e-23 113.6 106 61.3
Lsat_1_v5_gn_9_13500 Lactuca sativa HOM05D000091 ORTHO05D005533 1.4e-23 113.6 129 55.0
Rhsim13G0057700 Rhododendron simsii HOM05D000091 ORTHO05D005533 3.0e-23 112.5 132 50.8
Sp4g13070 Schrenkiella parvula HOM05D000091 ORTHO05D005533 3.9e-23 112.1 125 53.6
Lalb_Chr17g0345671 Lupinus albus HOM05D000091 ORTHO05D005533 5.1e-23 111.7 126 54.8
TPR.G7544 Trifolium pratense HOM05D000091 ORTHO05D005533 5.1e-23 111.7 128 53.9
ClCG07G010980 Citrullus lanatus HOM05D000091 ORTHO05D005533 8.8e-23 110.9 99 58.6
HanXRQChr08g0230191 Helianthus annuus HOM05D000091 ORTHO05D005533 8.8e-23 110.9 103 62.1
Medtr5g075640 Medicago truncatula HOM05D000091 ORTHO05D005533 8.8e-23 110.9 110 60.0
Aa31LG5G6250 Aethionema arabicum HOM05D000091 ORTHO05D005533 2.0e-22 109.8 123 56.1
Actinidia34503 Actinidia chinensis HOM05D000091 ORTHO05D005533 3.3e-22 109.0 99 58.6
ATR1127G096 Amborella trichopoda HOM05D000091 ORTHO05D005533 4.4e-22 108.6 110 55.5
Ca_15075_v3 Cicer arietinum L. HOM05D000091 ORTHO05D005533 5.7e-22 108.2 109 58.7
Glyma.02G237100 Glycine max HOM05D000091 ORTHO05D005533 5.7e-22 108.2 135 54.8
Phvul.008G245701 Phaseolus vulgaris HOM05D000091 ORTHO05D005533 5.7e-22 108.2 135 54.1
Phvul.009G074666 Phaseolus vulgaris HOM05D000091 ORTHO05D005533 5.7e-22 108.2 135 54.1
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 5.7e-22 108.2 130 53.8
FAN21G3679 Fragaria x ananassa HOM05D000091 ORTHO05D005533 9.7e-22 107.5 118 54.2
Glyma.11G200201 Glycine max HOM05D000091 ORTHO05D005533 9.7e-22 107.5 118 52.5
Glyma.14G206100 Glycine max HOM05D000091 ORTHO05D005533 9.7e-22 107.5 134 54.5
RcHm_v2.0_Chr5g0073591 Rosa chinensis HOM05D000091 ORTHO05D005533 9.7e-22 107.5 133 48.9
FAN16G0186 Fragaria x ananassa HOM05D000091 ORTHO05D005533 1.3e-21 107.1 116 53.4
CSS0000355 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D005533 1.7e-21 106.7 103 55.3
arahy.Tifrunner.gnm1.ann1.MWJV5X Arachis hypogaea HOM05D000091 ORTHO05D005533 2.2e-21 106.3 100 63.0
Lalb_Chr04g0251661 Lupinus albus HOM05D000091 ORTHO05D005533 2.2e-21 106.3 128 52.3
Prupe.6G039200 Prunus persica HOM05D000091 ORTHO05D005533 2.2e-21 106.3 123 52.0
vmacro14651 Vaccinium macrocarpon HOM05D000091 ORTHO05D005533 2.2e-21 106.3 113 54.0
SalBow2G2612 Salvia bowleyana HOM05D000091 ORTHO05D005533 3.7e-21 105.5 115 53.9
arahy.Tifrunner.gnm1.ann1.2LCT5X Arachis hypogaea HOM05D000091 ORTHO05D005533 4.8e-21 105.1 100 62.0
CSS0019815 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D005533 4.8e-21 105.1 133 46.6
Lj6g0014801 Lotus japonicus HOM05D000091 ORTHO05D005533 4.8e-21 105.1 108 57.4
MD11G1051400 Malus domestica HOM05D000091 ORTHO05D005533 4.8e-21 105.1 114 56.1
CSS0008144 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D005533 8.2e-21 104.4 133 46.6
QL01p024298 Quercus lobata HOM05D000091 ORTHO05D005533 8.2e-21 104.4 111 55.0
FAN25G1862 Fragaria x ananassa HOM05D000091 ORTHO05D005533 1.1e-20 104.0 118 52.5
Lsat_1_v5_gn_8_99781 Lactuca sativa HOM05D000091 ORTHO05D005533 1.4e-20 103.6 94 61.7
PSO384G2033 Papaver somniferum HOM05D000091 ORTHO05D005533 1.4e-20 103.6 100 57.0
Eucgr.B03325 Eucalyptus grandis HOM05D000091 ORTHO05D005533 1.8e-20 103.2 129 51.2
Phvul.006G080400 Phaseolus vulgaris HOM05D000091 ORTHO05D005533 1.8e-20 103.2 113 51.3
BcaC02g11143 Brassica carinata HOM05D000091 ORTHO05D005533 2.4e-20 102.8 120 51.7
A05p14950 Brassica napus HOM05D000091 ORTHO05D005533 2.4e-20 102.8 121 52.1
C04p20000 Brassica napus HOM05D000091 ORTHO05D005533 2.4e-20 102.8 120 51.7
BolC4t23539H Brassica oleracea HOM05D000091 ORTHO05D005533 2.4e-20 102.8 120 51.7
BraA05t20421Z Brassica rapa HOM05D000091 ORTHO05D005533 2.4e-20 102.8 121 52.1
Glyma.18G050800 Glycine max HOM05D000091 ORTHO05D005533 2.4e-20 102.8 114 55.3
CARHR123970 Cardamine hirsuta HOM05D000091 ORTHO05D005533 4.1e-20 102.1 111 54.1
PSO339G4925 Papaver somniferum HOM05D000091 ORTHO05D005533 4.1e-20 102.1 100 57.0
MSTRG.18534 Avicennia marina HOM05D000091 ORTHO05D005533 7.0e-20 101.3 121 51.2
Ca_05726_v3 Cicer arietinum L. HOM05D000091 ORTHO05D005533 7.0e-20 101.3 126 51.6
PGR102G0890 Punica granatum HOM05D000091 ORTHO05D005533 1.2e-19 100.5 113 54.9
BcaB02g10329 Brassica carinata HOM05D000091 ORTHO05D005533 1.5e-19 100.1 122 50.8
A03p17090 Brassica napus HOM05D000091 ORTHO05D005533 2.0e-19 99.8 94 60.6
C03p20190 Brassica napus HOM05D000091 ORTHO05D005533 2.0e-19 99.8 94 60.6
BraA03t10985Z Brassica rapa HOM05D000091 ORTHO05D005533 2.0e-19 99.8 94 60.6
FAN11G2137 Fragaria x ananassa HOM05D000091 ORTHO05D005533 2.0e-19 99.8 110 51.8
Ca_29651_v3 Cicer arietinum L. HOM05D000091 ORTHO05D005533 2.6e-19 99.4 122 50.0
HPP92_019755 Vanilla planifolia HOM05D000091 ORTHO05D005533 3.5e-19 99.0 137 46.0
VMungo0540G2386 Vigna mungo HOM05D000091 ORTHO05D005533 3.5e-19 99.0 112 47.3
FvH4_3g40860 Fragaria vesca HOM05D000091 ORTHO05D005533 5.9e-19 98.2 110 50.9
BcaB01g04088 Brassica carinata HOM05D000091 ORTHO05D005533 7.7e-19 97.8 94 59.6
BcaB01g04092 Brassica carinata HOM05D000091 ORTHO05D005533 7.7e-19 97.8 94 59.6
BcaC01g06005 Brassica carinata HOM05D000091 ORTHO05D005533 7.7e-19 97.8 94 59.6
BolC3t14393H Brassica oleracea HOM05D000091 ORTHO05D005533 7.7e-19 97.8 94 59.6
Lsat_1_v5_gn_8_99841 Lactuca sativa HOM05D000091 ORTHO05D005533 1.0e-18 97.4 100 54.0
ECA247G0676 Erigeron canadensis HOM05D000091 ORTHO05D005533 1.7e-18 96.7 102 52.9
MBI15_g32281_MAGBIO Magnolia biondii HOM05D000091 ORTHO05D005533 8.5e-18 94.4 86 57.0
MD03G1048900 Malus domestica HOM05D000091 ORTHO05D005533 8.5e-18 94.4 116 54.3
TPR.G40592 Trifolium pratense HOM05D000091 ORTHO05D005533 1.1e-17 94.0 106 51.9
ECA236G3414 Erigeron canadensis HOM05D000091 ORTHO05D005533 1.9e-17 93.2 100 51.0
Medtr3g062540 Medicago truncatula HOM05D000091 ORTHO05D005533 1.9e-17 93.2 110 54.5
CDE06G1119 Ceratophyllum demersum HOM05D000091 ORTHO05D005533 7.2e-17 91.3 127 47.2
CDE07G1112 Ceratophyllum demersum HOM05D000091 ORTHO05D005533 9.4e-17 90.9 127 46.5
HanXRQChr10g0292941 Helianthus annuus HOM05D000091 ORTHO05D005533 1.6e-16 90.1 129 45.7
Rhsim01G0244300 Rhododendron simsii HOM05D000091 ORTHO05D005533 4.7e-16 88.6 104 49.0
arahy.Tifrunner.gnm1.ann1.LVE7NM Arachis hypogaea HOM05D000091 ORTHO05D005533 8.0e-16 87.8 89 49.4
arahy.Tifrunner.gnm1.ann1.RJMS64 Arachis hypogaea HOM05D000091 ORTHO05D005533 1.0e-15 87.4 90 48.9
Nn2g10242 Nelumbo nucifera HOM05D000091 ORTHO05D005533 7.4e-14 81.3 93 50.5
Zm00001eb093890 Zea mays HOM05D000091 ORTHO05D005533 1.0e-10 70.9 120 43.3
Actinidia23831 Actinidia chinensis HOM05D000091 ORTHO05D005533 4.7e-08 62.0 58 56.9
Os11g0118300 Oryza sativa ssp. japonica HOM05D000091 ORTHO05D005533 4.0e-07 58.9 100 43.0
Os12g0117400 Oryza sativa ssp. japonica HOM05D000091 ORTHO05D005533 4.0e-07 58.9 100 43.0
SEGI_28784 Sequoiadendron giganteum HOM05D000091 ORTHO05D005533 3.3e-06 55.8 104 38.5


User provided reference genes

Program Settings