Gene: Carub.0004s1168

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s1168
  • Transcript Identifier Carub.0004s1168.1
  • Gene Type Coding gene
  • Location scaffold_4 : 7706535-7708814 : negative

Gene Family Information

  • ID HOM05D000091
  • #Genes/#Species 3486/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s1168.v1.1
  • pacid 39238694
  • synonym Carubv10022870m.g

Descriptions

  • Description PTHR32370//PTHR32370:SF17 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009638
IEA
InterProphototropism
GO:0009904
ISO
PLAZA Integrative Orthologychloroplast accumulation movement AT2G30520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G30520
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G30520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR000210 BTB/POZ domain
IPR029958 Root phototropism protein 2
IPR027356 NPH3 domain
IPR043454 NPH3/RPT2-like family
Mapman id Description
26.1.2.2.4 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin signalling factor (RPT2)