Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 5.6e-71 270.8 131 100.0
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 2.6e-68 261.9 130 96.9
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 3.5e-65 251.5 131 89.3
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 5.0e-64 247.7 130 86.2
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 6.6e-64 247.3 130 86.2
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 9.5e-63 243.4 130 86.2
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.8e-62 241.9 130 86.9
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 2.8e-62 241.9 129 88.4
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 3.6e-62 241.5 131 86.3
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.1e-62 240.4 131 87.0
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 8.1e-62 240.4 131 87.0
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 1.1e-61 240.0 128 87.5
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.1e-61 240.0 131 85.5
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.4e-61 239.6 130 83.1
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 2.3e-61 238.8 131 81.7
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 3.1e-61 238.4 130 86.9
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 6.8e-61 237.3 131 83.2
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.9e-61 236.9 131 86.3
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.2e-60 236.5 132 83.3
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.0e-60 235.7 128 84.4
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 2.6e-60 235.3 127 82.7
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 5.8e-60 234.2 127 82.7
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 9.8e-60 233.4 129 81.4
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.7e-59 232.6 127 81.1
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.9e-59 231.9 131 81.7
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 3.7e-59 231.5 131 81.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 8.3e-59 230.3 128 82.0
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.1e-58 229.9 130 83.1
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-58 229.9 130 83.8
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.9e-58 229.2 129 81.4
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.4e-58 228.8 130 82.3
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 2.4e-58 228.8 166 68.1
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.4e-58 228.8 131 80.2
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.1e-58 228.0 130 82.3
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 9.2e-58 226.9 129 79.8
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 9.2e-58 226.9 131 80.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 1.2e-57 226.5 129 82.9
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.2e-57 226.5 128 83.6
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.6e-57 226.1 124 83.1
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 2.1e-57 225.7 131 79.4
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.1e-57 225.7 130 81.5
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 4.6e-57 224.6 131 78.6
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 4.6e-57 224.6 131 78.6
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 4.6e-57 224.6 130 81.5
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 7.8e-57 223.8 125 82.4
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 7.8e-57 223.8 129 76.7
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 7.8e-57 223.8 122 83.6
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 1.0e-56 223.4 126 80.2
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.0e-56 223.4 131 77.1
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.3e-56 223.0 130 76.9
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.3e-56 223.0 130 76.9
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.3e-56 223.0 128 78.9
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.7e-56 222.6 128 78.9
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 3.0e-56 221.9 128 78.9
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 5.1e-56 221.1 131 77.1
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 6.6e-56 220.7 125 81.6
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 8.6e-56 220.3 131 76.3
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 1.1e-55 219.9 126 81.0
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.1e-55 219.9 126 81.0
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.5e-55 219.5 130 76.9
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.5e-55 219.5 126 81.0
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.9e-55 219.2 127 78.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.9e-55 219.2 129 77.5
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 2.5e-55 218.8 128 77.3
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.3e-55 218.4 125 80.8
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 5.6e-55 217.6 132 78.0
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 5.6e-55 217.6 131 75.6
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 7.3e-55 217.2 129 77.5
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 9.5e-55 216.9 132 78.0
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 1.2e-54 216.5 128 76.6
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.6e-54 216.1 127 76.4
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 4.7e-54 214.5 128 76.6
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.8e-53 212.6 126 77.8
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.3e-53 212.2 121 81.8
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 5.2e-53 211.1 129 75.2
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 8.9e-53 210.3 126 76.2
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 72.4
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 4.4e-52 208.0 130 68.5
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 5.8e-52 207.6 129 74.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 9.9e-52 206.8 126 72.2
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 1.9e-50 202.6 128 71.1
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 3.2e-50 201.8 128 70.3
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 2.1e-49 199.1 128 71.9
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.1e-49 199.1 115 80.9
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.0e-48 196.8 129 69.0
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.3e-48 196.4 127 66.1
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 2.1e-46 189.1 124 67.7
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.7e-46 188.0 127 66.1
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 4.7e-46 188.0 113 76.1
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.6e-44 182.2 126 62.7
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 5.8e-44 181.0 127 64.6
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.3e-43 179.9 131 61.1
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 3.3e-39 165.2 124 58.9
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 4.3e-39 164.9 114 64.9
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.8e-37 159.5 110 72.7
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 2.4e-37 159.1 128 53.1
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 2.7e-33 145.6 114 57.0
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.0e-32 143.7 129 50.4
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 3.9e-32 141.7 129 50.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.5e-31 139.8 157 47.8
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 8.1e-30 134.0 74 82.4
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.4e-29 133.3 81 77.8
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 5.3e-29 131.3 123 50.4
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 3.8e-27 125.2 75 80.0
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 5.3e-21 104.8 57 78.9
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.5e-20 103.2 57 78.9
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 2.0e-20 102.8 63 74.6
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 5.8e-20 101.3 53 79.2
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 1.0e-19 100.5 57 75.4
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.1e-17 92.8 53 69.8
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.0e-08 63.9 43 67.4
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-08 62.4 43 65.1
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 1.5e-07 60.1 36 80.6


User provided reference genes

Program Settings