Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 2.5e-60 235.3 124 100.0
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 2.9e-37 158.7 89 95.5
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 8.5e-37 157.1 89 93.3
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.1e-36 156.8 89 93.3
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 1.3e-21 106.7 90 65.6
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 5.0e-21 104.8 90 63.3
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 4.2e-20 101.7 91 62.6
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 6.1e-19 97.8 96 61.5
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 1.8e-18 96.3 89 62.9
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 3.0e-18 95.5 89 61.8
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 3.0e-18 95.5 89 65.2
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 2.0e-17 92.8 96 57.3
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 2.0e-17 92.8 96 57.3
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 2.6e-17 92.4 83 63.9
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 7.5e-17 90.9 83 61.4
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 7.5e-17 90.9 85 62.4
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 1.3e-16 90.1 89 61.8
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 1.3e-16 90.1 89 61.8
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 1.3e-16 90.1 89 57.3
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 3.7e-16 88.6 90 61.1
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 4.8e-16 88.2 89 62.9
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 4.8e-16 88.2 89 62.9
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 6.3e-16 87.8 75 62.7
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.1e-15 87.0 90 62.2
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.4e-15 86.7 89 61.8
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.8e-15 86.3 90 60.0
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 2.4e-15 85.9 90 56.7
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 4.1e-15 85.1 92 63.0
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 4.1e-15 85.1 89 60.7
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 9.1e-15 84.0 97 57.7
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 1.2e-14 83.6 91 63.7
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 1.2e-14 83.6 89 60.7
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 1.2e-14 83.6 91 58.2
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 1.6e-14 83.2 92 55.4
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 1.6e-14 83.2 90 58.9
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 2.0e-14 82.8 91 58.2
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 2.7e-14 82.4 86 55.8
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 2.7e-14 82.4 91 57.1
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 2.7e-14 82.4 88 56.8
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.7e-14 82.4 100 53.0
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 4.5e-14 81.6 86 54.7
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 4.5e-14 81.6 91 57.1
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 5.9e-14 81.3 92 57.6
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 7.7e-14 80.9 89 55.1
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 2.2e-13 79.3 89 53.9
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 3.8e-13 78.6 89 56.2
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.8e-13 78.6 88 55.7
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 3.8e-13 78.6 88 55.7
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 3.8e-13 78.6 90 57.8
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 5.0e-13 78.2 71 67.6
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.5e-12 75.9 89 55.1
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.2e-12 75.1 70 58.6
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.2e-12 75.1 70 58.6
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.2e-12 75.1 70 58.6
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.2e-12 75.1 70 58.6
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 5.5e-12 74.7 90 53.3
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 5.5e-12 74.7 77 59.7
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 5.5e-12 74.7 91 53.8
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 9.4e-12 73.9 81 56.8
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.2e-11 73.6 81 50.6
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 2.7e-11 72.4 70 57.1
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 3.6e-11 72.0 83 53.0
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 6.1e-11 71.2 59 64.4
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 6.1e-11 71.2 74 63.5
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.0e-10 70.5 98 48.0
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 1.8e-10 69.7 101 48.5
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 1.8e-10 69.7 85 54.1
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.8e-10 69.7 89 49.4
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 4.0e-10 68.6 89 53.9
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 1.5e-09 66.6 70 51.4
arahy.Tifrunner.gnm1.ann1.7R6RP5 Arachis hypogaea HOM05D003806 ORTHO05D004346 2.0e-09 66.2 79 54.4
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 2.6e-09 65.9 76 52.6
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 2.6e-09 65.9 70 51.4
Cc04_g04110 Coffea canephora HOM05D003806 ORTHO05D004346 5.7e-09 64.7 56 64.3
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 9.8e-09 63.9 85 47.1
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 9.8e-09 63.9 100 47.0
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 1.3e-08 63.5 76 51.3
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.9e-08 61.6 90 50.0
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.9e-08 61.6 90 48.9
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.1e-07 60.5 90 46.7
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 1.4e-07 60.1 90 47.8
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.4e-07 60.1 90 47.8
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.4e-07 60.1 90 47.8
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.4e-07 60.1 92 47.8
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 2.4e-07 59.3 90 45.6
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 4.1e-07 58.5 92 45.7
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 5.4e-07 58.2 64 50.0
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 7.0e-07 57.8 96 49.0
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 9.2e-07 57.4 91 47.3
ATR0763G279 Amborella trichopoda HOM05D003806 ORTHO05D004346 1.2e-06 57.0 105 41.0
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 1.2e-06 57.0 93 44.1
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 2.0e-06 56.2 90 48.9
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 2.0e-06 56.2 72 47.2
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 3.5e-06 55.5 70 47.1
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.5e-06 55.5 90 45.6
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 7.7e-06 54.3 76 46.1


User provided reference genes

Program Settings