Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 2.3e-93 346.3 293 100.0
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 2.8e-54 216.5 183 93.4
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.3e-40 171.0 119 85.7
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 2.4e-37 160.2 89 95.5
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 9.0e-29 131.7 119 63.9
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 4.5e-28 129.4 296 45.6
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 4.2e-26 122.9 120 63.3
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 7.1e-26 122.1 120 59.2
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 9.3e-26 121.7 120 60.0
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 1.6e-25 120.9 120 63.3
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 1.6e-25 120.9 120 63.3
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 3.9e-24 116.3 119 57.1
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 2.5e-23 113.6 119 57.1
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 4.3e-23 112.8 120 56.7
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 5.7e-23 112.5 118 58.5
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.3e-22 111.3 122 59.8
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 1.6e-22 110.9 118 59.3
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 2.8e-22 110.2 118 59.3
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 4.8e-22 109.4 122 62.3
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 1.1e-21 108.2 122 54.9
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 1.4e-21 107.8 119 55.5
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 3.1e-21 106.7 119 54.6
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 4.1e-21 106.3 121 59.5
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 5.3e-21 105.9 121 56.2
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 6.9e-21 105.5 120 60.0
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 2.0e-20 104.0 118 57.6
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 3.4e-20 103.2 118 53.4
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 4.5e-20 102.8 119 52.9
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 4.5e-20 102.8 119 56.3
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.0e-19 101.7 117 57.3
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 1.3e-19 101.3 119 55.5
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 2.2e-19 100.5 120 51.7
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 8.5e-19 98.6 123 52.0
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.1e-18 98.2 120 60.0
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 3.2e-18 96.7 119 52.1
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 4.2e-18 96.3 120 54.2
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 4.2e-18 96.3 122 54.1
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 5.5e-18 95.9 120 53.3
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 5.5e-18 95.9 97 63.9
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 5.5e-18 95.9 119 49.6
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 2.1e-17 94.0 120 53.3
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 2.1e-17 94.0 84 64.3
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.7e-17 93.6 119 52.1
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 4.6e-17 92.8 87 62.1
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 6.1e-17 92.4 120 52.5
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.0e-16 91.7 113 51.3
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.0e-16 91.7 117 53.8
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.0e-16 91.7 117 53.8
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.0e-16 91.7 120 52.5
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 2.3e-16 90.5 120 51.7
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 3.0e-16 90.1 119 53.8
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 3.9e-16 89.7 124 48.4
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 6.7e-16 89.0 117 50.4
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 6.7e-16 89.0 118 50.0
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 1.1e-15 88.2 123 53.7
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 2.5e-15 87.0 120 49.2
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 7.4e-15 85.5 120 50.0
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 9.7e-15 85.1 168 38.7
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.7e-14 84.3 120 49.2
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 2.8e-14 83.6 120 48.3
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.8e-14 83.6 120 48.3
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.8e-14 83.6 120 48.3
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 3.7e-14 83.2 120 48.3
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.8e-14 82.8 122 48.4
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 8.2e-14 82.0 117 47.9
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 1.1e-13 81.6 119 44.5
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 2.4e-13 80.5 119 45.4
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 4.1e-13 79.7 121 48.8
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 5.3e-13 79.3 120 46.7
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 6.9e-13 79.0 119 42.9
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 1.5e-12 77.8 118 44.1
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 2.6e-12 77.0 116 52.6
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.4e-12 76.6 71 59.2
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.4e-12 76.6 71 59.2
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.4e-12 76.6 71 59.2
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.5e-12 76.3 84 53.6
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 5.9e-12 75.9 124 47.6
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.0e-11 75.1 82 51.2
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 1.3e-11 74.7 94 50.0
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 2.2e-11 73.9 120 45.8
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 2.9e-11 73.6 121 46.3
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 2.9e-11 73.6 71 57.7
ATR0763G279 Amborella trichopoda HOM05D003806 ORTHO05D004346 3.8e-11 73.2 133 42.1
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 6.5e-11 72.4 60 65.0
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 8.5e-11 72.0 122 52.5
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 1.4e-10 71.2 126 44.4
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 1.9e-10 70.9 123 43.9
arahy.Tifrunner.gnm1.ann1.7R6RP5 Arachis hypogaea HOM05D003806 ORTHO05D004346 3.2e-10 70.1 87 54.0
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 4.2e-10 69.7 125 44.0
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 4.2e-10 69.7 86 53.5
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 5.5e-10 69.3 120 41.7
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 5.5e-10 69.3 121 47.1
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 5.5e-10 69.3 120 43.3
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 9.4e-10 68.6 119 41.2
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 1.2e-09 68.2 71 52.1
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 1.6e-09 67.8 119 43.7
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 2.1e-09 67.4 71 52.1
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 2.7e-09 67.0 110 42.7
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 3.6e-09 66.6 117 42.7
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.6e-09 66.6 120 42.5
Actinidia31597 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.7e-09 66.2 122 44.3
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 4.7e-09 66.2 119 40.3
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 6.1e-09 65.9 119 40.3
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 6.1e-09 65.9 121 42.1
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 7.9e-09 65.5 121 42.1
Cc04_g04110 Coffea canephora HOM05D003806 ORTHO05D004346 7.9e-09 65.5 57 64.9
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.4e-08 64.7 119 40.3
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 5.1e-08 62.8 120 40.8
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.7e-08 62.4 119 42.9
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 8.8e-08 62.0 119 40.3


User provided reference genes

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