Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 7.5e-250 866.7 430 100.0
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.3e-238 829.3 430 95.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.1e-227 793.1 430 91.4
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.2e-210 736.5 427 83.6
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.3e-209 733.0 422 85.8
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.0e-206 721.8 428 82.9
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 5.6e-205 717.6 422 81.5
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.4e-203 712.2 429 81.1
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 4.0e-203 711.4 429 82.3
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 5.3e-203 711.1 428 80.6
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.7e-201 706.1 426 79.6
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.2e-201 705.7 422 80.6
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 4.9e-201 704.5 431 79.8
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 8.4e-201 703.7 418 80.6
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.2e-200 701.8 431 79.8
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 9.3e-200 700.3 431 79.1
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.3e-198 695.7 418 80.1
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.9e-198 694.9 418 79.4
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 8.7e-198 693.7 421 80.8
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.5e-197 692.2 459 74.7
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 3.7e-196 688.3 430 78.1
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.8e-195 686.0 418 79.4
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.2e-194 683.3 438 76.3
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.6e-194 682.2 428 77.8
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 7.7e-194 680.6 438 76.0
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 5.5e-192 674.5 428 77.3
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 5.5e-192 674.5 428 76.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 7.2e-192 674.1 423 78.0
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.6e-191 672.9 431 75.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.1e-191 672.5 428 75.9
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.7e-191 672.2 420 77.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.7e-191 672.2 420 77.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.0e-190 670.2 458 73.6
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.0e-190 668.7 428 75.5
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.9e-190 668.3 429 76.2
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 7.4e-189 664.1 419 76.6
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.7e-188 662.9 428 76.6
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 6.3e-188 661.0 429 75.5
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 3.1e-187 658.7 427 75.2
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 4.1e-187 658.3 428 75.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.5e-186 656.4 424 75.5
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.5e-186 654.8 421 74.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.7e-186 654.1 412 77.2
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.2e-185 652.5 421 76.7
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 2.9e-185 652.1 423 75.4
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 3.2e-184 648.7 419 74.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 7.2e-184 647.5 423 74.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 9.4e-184 647.1 427 73.5
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.6e-183 646.4 419 75.7
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.9e-182 641.7 429 71.1
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.5e-181 639.8 429 70.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.3e-181 638.6 419 74.5
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.7e-181 637.9 419 74.2
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.7e-181 637.9 422 73.5
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 7.4e-181 637.5 419 74.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 7.4e-181 637.5 447 72.0
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.7e-180 636.3 422 73.5
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.2e-180 636.0 419 74.0
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.2e-180 636.0 419 73.7
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 4.8e-180 634.8 430 71.6
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 5.3e-179 631.3 433 71.8
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.5e-178 628.2 430 71.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 5.9e-178 627.9 420 73.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 5.9e-178 627.9 419 74.0
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.2e-177 625.9 430 70.9
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 8.5e-177 624.0 420 71.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.1e-176 623.6 421 72.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.9e-176 622.9 442 69.7
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 2.5e-176 622.5 433 70.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 2.5e-176 622.5 433 70.7
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.5e-176 622.5 424 71.9
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 3.2e-176 622.1 433 70.7
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.2e-176 622.1 418 71.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.2e-176 622.1 418 71.3
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 3.2e-176 622.1 547 61.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.2e-176 621.7 433 70.9
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.2e-176 621.7 420 72.9
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.5e-176 621.3 420 72.9
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.1e-175 619.4 418 70.8
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.7e-175 619.0 420 72.6
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 6.1e-175 617.8 424 69.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.4e-174 616.7 422 71.6
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.3e-174 615.9 422 69.9
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 8.8e-174 614.0 466 65.5
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.6e-173 612.5 433 70.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.7e-172 609.8 424 71.0
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 3.7e-172 608.6 430 70.0
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 6.3e-172 607.8 424 69.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.4e-171 606.7 418 69.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.4e-171 606.7 418 68.7
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.6e-170 603.2 418 70.1
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.6e-170 602.4 424 69.1
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 7.7e-170 600.9 415 72.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.9e-168 596.3 418 67.9
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.2e-167 593.6 418 67.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 2.8e-164 582.4 423 68.8
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 4.1e-163 578.6 425 65.2
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 7.2e-160 567.8 422 66.4
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.7e-159 565.1 428 62.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.1e-155 553.9 416 66.1
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 8.6e-153 544.3 334 79.9
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 8.6e-153 544.3 427 61.8
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.4e-147 526.2 355 71.8
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.0e-146 523.1 422 63.5
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 3.9e-145 518.8 429 59.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 4.7e-143 511.9 431 57.3
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 7.8e-138 494.6 434 60.8
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.2e-135 485.0 422 55.9
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.2e-133 480.7 353 68.6
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 6.4e-132 474.9 425 59.3
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.9e-131 473.4 423 54.1
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.1e-127 459.9 297 72.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.4e-126 457.2 261 83.9
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 7.1e-123 444.9 425 49.9
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.1e-118 429.5 242 85.1
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 5.2e-118 428.7 432 54.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.0e-89 334.7 197 82.2
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 5.0e-84 315.8 412 44.2
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.2e-77 294.7 234 59.0
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 8.8e-73 278.5 183 76.0
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 9.1e-70 268.5 291 50.5
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-56 224.9 137 81.8
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 8.6e-36 155.6 93 76.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.9e-31 140.6 100 67.0
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.4e-30 138.3 88 70.5
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.0e-25 122.1 86 65.1
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 2.3e-12 77.8 102 44.1
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 5.6e-11 73.2 336 22.6
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.2e-08 65.5 41 68.3


User provided reference genes

Program Settings