Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0113000 Salix brachista HOM05D003382 ORTHO05D003930 7.2e-54 213.8 117 100.0
Potri.005G141500 Populus trichocarpa HOM05D003382 ORTHO05D003930 1.6e-21 106.3 78 74.4
QL06p040205 Quercus lobata HOM05D003382 ORTHO05D003930 4.4e-19 98.2 78 64.1
Cfa004049 Carpinus fangiana HOM05D003382 ORTHO05D003930 1.2e-16 90.1 78 62.8
Sabra07G0042400 Salix brachista HOM05D003382 ORTHO05D003930 1.2e-16 90.1 78 66.7
Potri.007G047500 Populus trichocarpa HOM05D003382 ORTHO05D003930 2.1e-16 89.4 78 62.8
RcHm_v2.0_Chr2g0106411 Rosa chinensis HOM05D003382 ORTHO05D003930 3.5e-16 88.6 79 59.5
FvH4_1g16500 Fragaria vesca HOM05D003382 ORTHO05D003930 4.6e-16 88.2 79 60.8
FAN19G0190 Fragaria x ananassa HOM05D003382 ORTHO05D003930 4.6e-16 88.2 79 60.8
Haze_15361 Corylus avellana HOM05D003382 ORTHO05D003930 6.0e-16 87.8 79 62.0
FAN28G1977 Fragaria x ananassa HOM05D003382 ORTHO05D003930 1.0e-15 87.0 79 59.5
FAN26G1389 Fragaria x ananassa HOM05D003382 ORTHO05D003930 1.3e-15 86.7 79 60.8
FAN28G2539 Fragaria x ananassa HOM05D003382 ORTHO05D003930 1.3e-15 86.7 79 58.2
MD15G1287400 Malus domestica HOM05D003382 ORTHO05D003930 1.7e-15 86.3 79 59.5
Aqoxy5G01170 Aquilegia oxysepala HOM05D003382 ORTHO05D003930 3.0e-15 85.5 79 57.0
TWI73G0794 Tripterygium wilfordii HOM05D003382 ORTHO05D003930 3.0e-15 85.5 79 60.8
FAN23G3096 Fragaria x ananassa HOM05D003382 ORTHO05D003930 3.9e-15 85.1 79 58.2
GSVIVG01022064001 Vitis vinifera HOM05D003382 ORTHO05D003930 6.6e-15 84.3 82 56.1
DCAR_025752 Daucus carota HOM05D003382 ORTHO05D003930 8.6e-15 84.0 75 61.3
Glyma.01G189200 Glycine max HOM05D003382 ORTHO05D003930 4.3e-14 81.6 79 58.2
Glyma.11G053000 Glycine max HOM05D003382 ORTHO05D003930 4.3e-14 81.6 85 52.9
TAR376G0471 Trochodendron aralioides HOM05D003382 ORTHO05D003930 5.6e-14 81.3 78 53.8
Prupe.6G230500 Prunus persica HOM05D003382 ORTHO05D003930 7.3e-14 80.9 79 57.0
TAR381G1333 Trochodendron aralioides HOM05D003382 ORTHO05D003930 9.5e-14 80.5 79 54.4
EL10Ac6g15703 Beta vulgaris HOM05D003382 ORTHO05D003930 1.2e-13 80.1 81 54.3
CSS0022388 Camellia sinensis var. sinensis HOM05D003382 ORTHO05D003930 2.8e-13 79.0 79 54.4
VMungo1215G2685 Vigna mungo HOM05D003382 ORTHO05D003930 2.8e-13 79.0 79 53.2
Ciclev10025401m.g Citrus clementina HOM05D003382 ORTHO05D003930 3.6e-13 78.6 78 55.1
Nitab4.5_0002214g0040 Nicotiana tabacum HOM05D003382 ORTHO05D003930 3.6e-13 78.6 82 53.7
Nitab4.5_0002465g0060 Nicotiana tabacum HOM05D003382 ORTHO05D003930 3.6e-13 78.6 82 53.7
ClCG01G016990 Citrullus lanatus HOM05D003382 ORTHO05D003930 4.7e-13 78.2 88 52.3
Peaxi162Scf00078g01420 Petunia axillaris HOM05D003382 ORTHO05D003930 4.7e-13 78.2 80 55.0
CsaV3_6G043470 Cucumis sativus L. HOM05D003382 ORTHO05D003930 6.2e-13 77.8 79 55.7
PGR004G0325 Punica granatum HOM05D003382 ORTHO05D003930 6.2e-13 77.8 78 59.0
TWI09G1091 Tripterygium wilfordii HOM05D003382 ORTHO05D003930 6.2e-13 77.8 79 57.0
CANSAT25G0401 Cannabis sativa HOM05D003382 ORTHO05D003930 8.1e-13 77.4 90 54.4
MELO3C007577.2 Cucumis melo HOM05D003382 ORTHO05D003930 8.1e-13 77.4 79 55.7
AUR62003925 Chenopodium quinoa HOM05D003382 ORTHO05D003930 1.1e-12 77.0 81 51.9
AUR62038239 Chenopodium quinoa HOM05D003382 ORTHO05D003930 1.1e-12 77.0 81 51.9
Lj2g0012816 Lotus japonicus HOM05D003382 ORTHO05D003930 1.4e-12 76.6 79 53.2
TAR628G1387 Trochodendron aralioides HOM05D003382 ORTHO05D003930 1.8e-12 76.3 78 53.8
HanXRQChr14g0460431 Helianthus annuus HOM05D003382 ORTHO05D003930 2.3e-12 75.9 73 53.4
MD02G1177600 Malus domestica HOM05D003382 ORTHO05D003930 2.3e-12 75.9 79 53.2
Hma1.2p1_3474F.1_g336290 Hydrangea macrophylla HOM05D003382 ORTHO05D003930 3.1e-12 75.5 76 55.3
Phvul.002G016000 Phaseolus vulgaris HOM05D003382 ORTHO05D003930 3.1e-12 75.5 79 53.2
Lj4g0013634 Lotus japonicus HOM05D003382 ORTHO05D003930 4.0e-12 75.1 79 51.9
Rhsim08G0098200 Rhododendron simsii HOM05D003382 ORTHO05D003930 4.0e-12 75.1 78 52.6
Rhsim10G0113400 Rhododendron simsii HOM05D003382 ORTHO05D003930 4.0e-12 75.1 79 51.9
arahy.Tifrunner.gnm1.ann1.27CBEW Arachis hypogaea HOM05D003382 ORTHO05D003930 5.2e-12 74.7 90 47.8
arahy.Tifrunner.gnm1.ann1.S4MMCZ Arachis hypogaea HOM05D003382 ORTHO05D003930 5.2e-12 74.7 90 47.8
Hma1.2p1_2648F.1_g326090 Hydrangea macrophylla HOM05D003382 ORTHO05D003930 5.2e-12 74.7 75 56.0
Solyc11g011850.2 Solanum lycopersicum HOM05D003382 ORTHO05D003930 5.2e-12 74.7 80 51.2
Sopen11g006680 Solanum pennellii HOM05D003382 ORTHO05D003930 5.2e-12 74.7 80 51.2
PGSC0003DMG400013327 Solanum tuberosum HOM05D003382 ORTHO05D003930 5.2e-12 74.7 80 51.2
Lalb_Chr09g0323331 Lupinus albus HOM05D003382 ORTHO05D003930 6.8e-12 74.3 79 51.9
ECA232G1178 Erigeron canadensis HOM05D003382 ORTHO05D003930 8.9e-12 73.9 73 54.8
Manes.13G119600 Manihot esculenta HOM05D003382 ORTHO05D003930 8.9e-12 73.9 78 57.7
CiPaw.01G014100 Carya illinoinensis HOM05D003382 ORTHO05D003930 1.2e-11 73.6 63 61.9
COL.COLO4_11466 Corchorus olitorius HOM05D003382 ORTHO05D003930 1.2e-11 73.6 74 55.4
CAN.G222.166 Capsicum annuum HOM05D003382 ORTHO05D003930 1.5e-11 73.2 80 51.2
Sed0013280 Sechium edule HOM05D003382 ORTHO05D003930 1.5e-11 73.2 79 51.9
Hund16361 Selenicereus undatus HOM05D003382 ORTHO05D003930 1.5e-11 73.2 81 50.6
Psat0s1867g0120 Pisum sativum HOM05D003382 ORTHO05D003930 2.0e-11 72.8 79 51.9
CiPaw.02G007100 Carya illinoinensis HOM05D003382 ORTHO05D003930 3.4e-11 72.0 78 50.0
Lalb_Chr16g0378671 Lupinus albus HOM05D003382 ORTHO05D003930 3.4e-11 72.0 79 51.9
PSO675G2844 Papaver somniferum HOM05D003382 ORTHO05D003930 3.4e-11 72.0 78 51.3
Gorai.007G216800 Gossypium raimondii HOM05D003382 ORTHO05D003930 4.4e-11 71.6 74 59.5
Lj4A155G86 Lonicera japonica HOM05D003382 ORTHO05D003930 4.4e-11 71.6 87 46.0
Medtr4g094912 Medicago truncatula HOM05D003382 ORTHO05D003930 4.4e-11 71.6 85 47.1
Atru.chr3.265 Acer truncatum HOM05D003382 ORTHO05D003930 7.5e-11 70.9 78 50.0
PSO541G0593 Papaver somniferum HOM05D003382 ORTHO05D003930 7.5e-11 70.9 78 51.3
Gohir.A11G196300 Gossypium hirsutum HOM05D003382 ORTHO05D003930 9.9e-11 70.5 74 58.1
Ca_24746_v3 Cicer arietinum L. HOM05D003382 ORTHO05D003930 1.3e-10 70.1 78 47.4
Gohir.A02G155500 Gossypium hirsutum HOM05D003382 ORTHO05D003930 1.3e-10 70.1 72 55.6
Gorai.003G026800 Gossypium raimondii HOM05D003382 ORTHO05D003930 1.3e-10 70.1 72 54.2
Nn1g04747 Nelumbo nucifera HOM05D003382 ORTHO05D003930 1.3e-10 70.1 84 47.6
Gohir.D03G025200 Gossypium hirsutum HOM05D003382 ORTHO05D003930 1.7e-10 69.7 72 54.2
Duzib264G1059 Durio zibethinus HOM05D003382 ORTHO05D003930 2.2e-10 69.3 69 58.0
Hma1.2p1_0017F.1_g011810 Hydrangea macrophylla HOM05D003382 ORTHO05D003930 2.2e-10 69.3 77 51.9
Thecc.01G062100 Theobroma cacao HOM05D003382 ORTHO05D003930 2.2e-10 69.3 66 57.6
THA.LOC104807598 Tarenaya hassleriana HOM05D003382 ORTHO05D003930 2.9e-10 68.9 78 51.3
TPR.G14589 Trifolium pratense HOM05D003382 ORTHO05D003930 3.7e-10 68.6 79 48.1
Migut.H00405 Erythranthe guttata HOM05D003382 ORTHO05D003930 8.3e-10 67.4 77 45.5
Duzib147G0315 Durio zibethinus HOM05D003382 ORTHO05D003930 1.4e-09 66.6 62 56.5
Manes.12G107600 Manihot esculenta HOM05D003382 ORTHO05D003930 3.2e-09 65.5 78 50.0
Duzib187G0504 Durio zibethinus HOM05D003382 ORTHO05D003930 5.4e-09 64.7 65 55.4
Glyma.17G168400 Glycine max HOM05D003382 ORTHO05D003930 5.4e-09 64.7 79 48.1
Eucgr.I00880 Eucalyptus grandis HOM05D003382 ORTHO05D003930 7.1e-09 64.3 77 48.1
Glyma.16G095800 Glycine max HOM05D003382 ORTHO05D003930 7.1e-09 64.3 79 46.8
MSTRG.3440 Avicennia marina HOM05D003382 ORTHO05D003930 1.2e-08 63.5 86 41.9
TAR625G0350 Trochodendron aralioides HOM05D003382 ORTHO05D003930 1.2e-08 63.5 65 52.3
vmacro17969 Vaccinium macrocarpon HOM05D003382 ORTHO05D003930 1.2e-08 63.5 81 48.1
Migut.L00178 Erythranthe guttata HOM05D003382 ORTHO05D003930 1.6e-08 63.2 90 38.9
Lsat_1_v5_gn_2_85701 Lactuca sativa HOM05D003382 ORTHO05D003930 1.6e-08 63.2 73 47.9
SGA_v2.0_scaffold15G07357 Striga asiatica HOM05D003382 ORTHO05D003930 2.1e-08 62.8 77 48.1
Cc07_g06350 Coffea canephora HOM05D003382 ORTHO05D003930 3.5e-08 62.0 76 46.1
Dinv26854 Davidia involucrata HOM05D003382 ORTHO05D003930 3.5e-08 62.0 76 44.7
Ca_22129_v3 Cicer arietinum L. HOM05D003382 ORTHO05D003930 4.6e-08 61.6 66 50.0
Gorai.004G051000 Gossypium raimondii HOM05D003382 ORTHO05D003930 6.0e-08 61.2 73 56.2
Sc07g0000690 Simmondsia chinensis HOM05D003382 ORTHO05D003930 7.8e-08 60.8 83 44.6
DCAR_021478 Daucus carota HOM05D003382 ORTHO05D003930 1.0e-07 60.5 74 50.0
PSO170G3452 Papaver somniferum HOM05D003382 ORTHO05D003930 1.0e-07 60.5 80 43.8
vmacro05261 Vaccinium macrocarpon HOM05D003382 ORTHO05D003930 1.0e-07 60.5 82 43.9
Medtr5g016600 Medicago truncatula HOM05D003382 ORTHO05D003930 1.7e-07 59.7 29 82.8
Dinv30023 Davidia involucrata HOM05D003382 ORTHO05D003930 2.3e-07 59.3 31 74.2
Lj7A75T29 Lonicera japonica HOM05D003382 ORTHO05D003930 2.3e-07 59.3 69 49.3
Lj7A81T14 Lonicera japonica HOM05D003382 ORTHO05D003930 2.3e-07 59.3 69 49.3
HanXRQChr15g0491931 Helianthus annuus HOM05D003382 ORTHO05D003930 3.0e-07 58.9 73 47.9
Actinidia16465 Actinidia chinensis HOM05D003382 ORTHO05D003930 3.9e-07 58.5 79 45.6
PSO210G2217 Papaver somniferum HOM05D003382 ORTHO05D003930 3.9e-07 58.5 81 42.0
Sed0001836 Sechium edule HOM05D003382 ORTHO05D003930 3.9e-07 58.5 78 41.0
ATR0762G014 Amborella trichopoda HOM05D003382 ORTHO05D003930 5.1e-07 58.2 80 43.8
Carub.0007s0306 Capsella rubella HOM05D003382 ORTHO05D003930 1.5e-06 56.6 91 39.6
Gorai.004G051100 Gossypium raimondii HOM05D003382 ORTHO05D003930 1.9e-06 56.2 62 53.2
Lalb_Chr05g0213401 Lupinus albus HOM05D003382 ORTHO05D003930 1.9e-06 56.2 79 44.3
THA.LOC104819856 Tarenaya hassleriana HOM05D003382 ORTHO05D003930 3.3e-06 55.5 94 37.2
Oeu014792.2 Olea europaea HOM05D003382 ORTHO05D003930 5.6e-06 54.7 76 43.4
VMungo0251G2741 Vigna mungo HOM05D003382 ORTHO05D003930 7.3e-06 54.3 58 50.0
Psat2g028760 Pisum sativum HOM05D003382 ORTHO05D003930 9.5e-06 53.9 79 40.5


User provided reference genes

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