Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0151700 Salix brachista HOM05D038816 ORTHO05D019287 1.2e-115 419.9 217 100.0
Potri.016G134000 Populus trichocarpa HOM05D000215 ORTHO05D002239 1.8e-45 186.8 115 87.0
Sabra06G0083700 Salix brachista HOM05D000215 ORTHO05D002239 3.2e-39 166.0 113 78.8
Potri.006G107600 Populus trichocarpa HOM05D000215 ORTHO05D002239 1.6e-38 163.7 115 75.7
Manes.08G173500 Manihot esculenta HOM05D000215 ORTHO05D002239 1.4e-34 150.6 117 67.5
TWI74G1010 Tripterygium wilfordii HOM05D000215 ORTHO05D002239 1.5e-33 147.1 112 67.0
Ciclev10011217m.g Citrus clementina HOM05D000215 ORTHO05D002239 2.0e-33 146.7 114 65.8
Duzib151G1209 Durio zibethinus HOM05D000215 ORTHO05D002239 2.0e-33 146.7 116 67.2
MD12G1185600 Malus domestica HOM05D000215 ORTHO05D002239 2.6e-33 146.4 113 68.1
Ca_19767_v3 Cicer arietinum L. HOM05D000215 ORTHO05D002239 4.5e-33 145.6 114 67.5
Medtr4g028960 Medicago truncatula HOM05D000215 ORTHO05D002239 1.3e-32 144.1 112 67.9
Potri.016G134100 Populus trichocarpa HOM05D038816 ORTHO05D019287 1.3e-32 144.1 92 82.6
TWI77G0030 Tripterygium wilfordii HOM05D000215 ORTHO05D002239 1.3e-32 144.1 106 70.8
Psat7g230280 Pisum sativum HOM05D000215 ORTHO05D002239 2.2e-32 143.3 112 67.9
Manes.09G116300 Manihot esculenta HOM05D000215 ORTHO05D002239 4.9e-32 142.1 104 69.2
COL.COLO4_16556 Corchorus olitorius HOM05D000215 ORTHO05D002239 6.5e-32 141.7 117 64.1
Phvul.L001610 Phaseolus vulgaris HOM05D000215 ORTHO05D002239 8.4e-32 141.4 114 63.2
Thecc.04G154300 Theobroma cacao HOM05D000215 ORTHO05D002239 8.4e-32 141.4 111 64.9
VMungo0331G1803 Vigna mungo HOM05D000215 ORTHO05D002239 1.1e-31 141.0 112 64.3
RcHm_v2.0_Chr3g0460861 Rosa chinensis HOM05D000215 ORTHO05D002239 1.4e-31 140.6 113 64.6
Atru.chr8.2380 Acer truncatum HOM05D000215 ORTHO05D002239 1.9e-31 140.2 114 63.2
MD04G1172400 Malus domestica HOM05D000215 ORTHO05D002239 1.9e-31 140.2 114 67.5
Glyma.03G036700 Glycine max HOM05D000215 ORTHO05D002239 4.2e-31 139.0 100 70.0
Glyma.01G131800 Glycine max HOM05D000215 ORTHO05D002239 5.5e-31 138.7 100 69.0
Prupe.6G290800 Prunus persica HOM05D000215 ORTHO05D002239 5.5e-31 138.7 113 67.3
VMungo1383G1662 Vigna mungo HOM05D000215 ORTHO05D019287 5.5e-31 138.7 96 70.8
FvH4_5g29050 Fragaria vesca HOM05D000215 ORTHO05D002239 1.6e-30 137.1 113 62.8
FAN13G0611 Fragaria x ananassa HOM05D000215 ORTHO05D002239 1.6e-30 137.1 113 62.8
FAN18G3799 Fragaria x ananassa HOM05D000215 ORTHO05D002239 1.6e-30 137.1 113 62.8
CANSAT35G0758 Cannabis sativa HOM05D000215 ORTHO05D002239 2.1e-30 136.7 100 67.0
MELO3C025205.2 Cucumis melo HOM05D000215 ORTHO05D002239 2.1e-30 136.7 116 62.9
Gohir.A10G149500 Gossypium hirsutum HOM05D000215 ORTHO05D002239 2.7e-30 136.3 94 71.3
FAN08G1132 Fragaria x ananassa HOM05D000215 ORTHO05D002239 3.5e-30 136.0 113 61.9
Actinidia29045 Actinidia chinensis HOM05D000215 ORTHO05D002239 6.0e-30 135.2 112 61.6
CsaV3_4G027070 Cucumis sativus L. HOM05D000215 ORTHO05D002239 6.0e-30 135.2 110 63.6
QL07p032599 Quercus lobata HOM05D000215 ORTHO05D002239 6.0e-30 135.2 108 62.0
Gohir.D02G004700 Gossypium hirsutum HOM05D000215 ORTHO05D002239 1.0e-29 134.4 94 72.3
Gohir.D10G117300 Gossypium hirsutum HOM05D000215 ORTHO05D002239 1.0e-29 134.4 94 70.2
Gorai.005G005300 Gossypium raimondii HOM05D000215 ORTHO05D002239 1.0e-29 134.4 94 72.3
Gohir.A02G004300 Gossypium hirsutum HOM05D000215 ORTHO05D002239 1.3e-29 134.0 94 72.3
Cpa.g.sc86.33 Carica papaya HOM05D000215 ORTHO05D002239 1.8e-29 133.7 110 61.8
Hma1.2p1_1052F.1_g252330 Hydrangea macrophylla HOM05D000215 ORTHO05D002239 3.0e-29 132.9 107 61.7
Lalb_Chr13g0291871 Lupinus albus HOM05D000215 ORTHO05D002239 3.0e-29 132.9 117 61.5
Sed0009941 Sechium edule HOM05D000215 ORTHO05D002239 3.0e-29 132.9 111 64.9
ClCG04G006430 Citrullus lanatus HOM05D000215 ORTHO05D002239 5.1e-29 132.1 116 61.2
Gorai.011G129200 Gossypium raimondii HOM05D000215 ORTHO05D002239 5.1e-29 132.1 94 69.1
Nitab4.5_0003064g0010 Nicotiana tabacum HOM05D000215 ORTHO05D002239 6.7e-29 131.7 125 52.0
Sed0009880 Sechium edule HOM05D000215 ORTHO05D002239 6.7e-29 131.7 96 69.8
Haze_21155 Corylus avellana HOM05D000215 ORTHO05D002239 8.7e-29 131.3 111 62.2
Lj3g0005426 Lotus japonicus HOM05D000215 ORTHO05D002239 8.7e-29 131.3 94 70.2
Dinv25323 Davidia involucrata HOM05D000215 ORTHO05D002239 1.5e-28 130.6 115 57.4
CSS0011726 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 1.9e-28 130.2 97 68.0
Eucgr.K01275 Eucalyptus grandis HOM05D000215 ORTHO05D002239 1.9e-28 130.2 94 70.2
Cc06_g00510 Coffea canephora HOM05D000215 ORTHO05D002239 2.5e-28 129.8 116 60.3
Nitab4.5_0001694g0010 Nicotiana tabacum HOM05D000215 ORTHO05D002239 2.5e-28 129.8 115 55.7
PGR004G2249 Punica granatum HOM05D000215 ORTHO05D002239 2.5e-28 129.8 94 69.1
Cfa017058 Carpinus fangiana HOM05D000215 ORTHO05D002239 3.3e-28 129.4 114 59.6
DCAR_028911 Daucus carota HOM05D000215 ORTHO05D002239 3.3e-28 129.4 114 59.6
Rhsim05G0229300 Rhododendron simsii HOM05D000215 ORTHO05D002239 3.3e-28 129.4 115 59.1
CSS0023975 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 5.7e-28 128.6 97 68.0
CAN.G585.37 Capsicum annuum HOM05D000215 ORTHO05D002239 5.7e-28 128.6 101 63.4
GSVIVG01030205001 Vitis vinifera HOM05D000215 ORTHO05D002239 7.4e-28 128.3 95 68.4
CiPaw.09G219100 Carya illinoinensis HOM05D000215 ORTHO05D002239 9.6e-28 127.9 94 73.4
Lsat_1_v5_gn_5_150301 Lactuca sativa HOM05D000215 ORTHO05D002239 1.3e-27 127.5 114 56.1
THA.LOC104816167 Tarenaya hassleriana HOM05D000215 ORTHO05D002239 2.8e-27 126.3 117 59.0
VMungo0720G1258 Vigna mungo HOM05D000335 ORTHO05D000459 2.8e-27 126.3 95 67.4
Aa31LG5G11560 Aethionema arabicum HOM05D000215 ORTHO05D002239 3.7e-27 125.9 108 60.2
Peaxi162Scf00732g00425 Petunia axillaris HOM05D000215 ORTHO05D002239 4.8e-27 125.6 101 62.4
Lj2C61T5 Lonicera japonica HOM05D000215 ORTHO05D002239 6.3e-27 125.2 115 56.5
ECA248G3923 Erigeron canadensis HOM05D000215 ORTHO05D002239 1.1e-26 124.4 109 58.7
PGSC0003DMG400027759 Solanum tuberosum HOM05D000215 ORTHO05D002239 1.1e-26 124.4 101 60.4
CSS0030349 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 1.4e-26 124.0 96 62.5
Solyc09g018230.1 Solanum lycopersicum HOM05D000215 ORTHO05D002239 1.4e-26 124.0 101 59.4
HanXRQChr15g0464951 Helianthus annuus HOM05D000215 ORTHO05D002239 2.4e-26 123.2 114 56.1
Sopen09g010990 Solanum pennellii HOM05D000215 ORTHO05D002239 3.1e-26 122.9 101 59.4
Migut.J00059 Erythranthe guttata HOM05D000215 ORTHO05D002239 4.1e-26 122.5 117 54.7
Carub.0001s3832 Capsella rubella HOM05D000215 ORTHO05D002239 5.3e-26 122.1 92 64.1
SGA_v2.0_scaffold85G26647 Striga asiatica HOM05D000215 ORTHO05D002239 5.3e-26 122.1 98 62.2
SalBow5G2526 Salvia bowleyana HOM05D000215 ORTHO05D002239 9.0e-26 121.3 109 56.9
AT5G01830 Arabidopsis thaliana HOM05D000215 ORTHO05D002239 1.5e-25 120.6 110 55.5
AL6G10200 Arabidopsis lyrata HOM05D000215 ORTHO05D002239 2.0e-25 120.2 92 64.1
Thhalv10022583m.g Eutrema salsugineum HOM05D000215 ORTHO05D002239 2.0e-25 120.2 92 64.1
MSTRG.5513 Avicennia marina HOM05D000215 ORTHO05D002239 3.4e-25 119.4 98 64.3
Oeu057995.1 Olea europaea HOM05D000215 ORTHO05D002239 3.4e-25 119.4 114 56.1
CARHR212180 Cardamine hirsuta HOM05D000215 ORTHO05D002239 4.5e-25 119.0 110 54.5
Sp3g29940 Schrenkiella parvula HOM05D000215 ORTHO05D002239 4.5e-25 119.0 92 63.0
BcaC06g36184 Brassica carinata HOM05D000215 ORTHO05D002239 7.6e-25 118.2 92 60.9
A07p04290 Brassica napus HOM05D000215 ORTHO05D002239 7.6e-25 118.2 92 60.9
C07p06800 Brassica napus HOM05D000215 ORTHO05D002239 7.6e-25 118.2 92 60.9
BolC7t41101H Brassica oleracea HOM05D000215 ORTHO05D002239 7.6e-25 118.2 92 60.9
BraA07t28220Z Brassica rapa HOM05D000215 ORTHO05D002239 7.6e-25 118.2 92 60.9
AUR62006365 Chenopodium quinoa HOM05D000215 ORTHO05D002239 7.6e-25 118.2 99 60.6
Dinv11383 Davidia involucrata HOM05D000215 ORTHO05D002239 7.6e-25 118.2 110 56.4
BcaB03g16408 Brassica carinata HOM05D000215 ORTHO05D002239 1.0e-24 117.9 92 60.9
AUR62029698 Chenopodium quinoa HOM05D000215 ORTHO05D002239 2.2e-24 116.7 99 60.6
Oeu024008.1 Olea europaea HOM05D000215 ORTHO05D002239 2.9e-24 116.3 114 56.1
Aqoxy4G02365 Aquilegia oxysepala HOM05D000215 ORTHO05D002239 3.8e-24 115.9 94 59.6
Sc20g0006840 Simmondsia chinensis HOM05D000215 ORTHO05D002239 6.5e-24 115.2 100 57.0
TAR623G0186 Trochodendron aralioides HOM05D000215 ORTHO05D002239 6.5e-24 115.2 96 59.4
Ah.15g090180 Amaranthus hybridus HOM05D000131 ORTHO05D002239 9.3e-23 111.3 99 56.6
unitig_26.g8960 Utricularia gibba HOM05D000215 ORTHO05D002239 1.6e-22 110.5 95 58.9
Ah.08g209670 Amaranthus hybridus HOM05D000215 ORTHO05D002239 1.3e-21 107.5 99 54.5
EL10Ac7g17067 Beta vulgaris HOM05D000215 ORTHO05D002239 3.9e-21 105.9 93 57.0
PSO017G6701 Papaver somniferum HOM05D000215 ORTHO05D002239 6.7e-21 105.1 118 46.6
PSO170G4222 Papaver somniferum HOM05D000215 ORTHO05D002239 1.9e-20 103.6 118 46.6
Nn2g10344 Nelumbo nucifera HOM05D000215 ORTHO05D002239 7.4e-20 101.7 122 45.9
unitig_26.g10532 Utricularia gibba HOM05D000215 ORTHO05D002239 7.4e-20 101.7 93 55.9
unitig_27.g24884 Utricularia gibba HOM05D000215 ORTHO05D019287 2.9e-16 89.7 68 64.7
Zm00001eb149420 Zea mays HOM05D000215 ORTHO05D002239 5.0e-16 89.0 91 49.5
VMungo1215G2680 Vigna mungo HOM05D000215 ORTHO05D019287 1.1e-15 87.8 96 53.1
Zm00001eb368740 Zea mays HOM05D000215 ORTHO05D002239 1.1e-15 87.8 91 49.5
Os05g0476700 Oryza sativa ssp. japonica HOM05D000215 ORTHO05D002239 2.5e-15 86.7 112 42.9
VMungo0331G0411 Vigna mungo HOM05D002884 ORTHO05D003178 4.2e-15 85.9 77 58.4
HPP92_017921 Vanilla planifolia HOM05D000215 ORTHO05D002239 5.5e-15 85.5 94 48.9
Os01g0823900 Oryza sativa ssp. japonica HOM05D000215 ORTHO05D002239 7.2e-15 85.1 91 48.4
VMungo0720G2640 Vigna mungo HOM05D000833 ORTHO05D019287 7.2e-15 85.1 77 58.4
VMungo1385G0001 Vigna mungo HOM05D000215 ORTHO05D019287 1.1e-10 71.2 68 57.4
Zm00001eb290550 Zea mays HOM05D000215 ORTHO05D002239 1.4e-10 70.9 91 42.9
ATR0681G359 Amborella trichopoda HOM05D000215 ORTHO05D002239 6.9e-10 68.6 88 45.5
unitig_699.g19593 Utricularia gibba HOM05D000215 ORTHO05D002239 1.2e-09 67.8 68 50.0
CDE04G1811 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 5.0e-08 62.4 89 38.2
TAR623G0979 Trochodendron aralioides HOM05D009064 ORTHO05D010640 6.5e-08 62.0 118 37.3
Manes.08G173600 Manihot esculenta HOM05D038816 ORTHO05D019287 1.4e-07 60.8 93 41.9
CDE03G0084 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 1.9e-07 60.5 90 38.9
Hma1.2p1_2086F.1_g313715 Hydrangea macrophylla HOM05D009064 ORTHO05D010640 4.2e-07 59.3 104 40.4
CDE03G0190 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 9.4e-07 58.2 90 38.9
Glyma.04G221450 Glycine max HOM05D009064 ORTHO05D010640 9.4e-07 58.2 57 52.6
THA.LOC104814265 Tarenaya hassleriana HOM05D000215 ORTHO05D002239 1.6e-06 57.4 100 35.0
unitig_578.g16464 Utricularia gibba HOM05D000215 ORTHO05D002239 1.6e-06 57.4 86 37.2
MSTRG.16172 Avicennia marina HOM05D000215 ORTHO05D002239 7.9e-06 55.1 118 35.6
MELO3C002678.2 Cucumis melo HOM05D000215 ORTHO05D002239 7.9e-06 55.1 125 32.0


User provided reference genes

Program Settings