Gene: Solyc09g018230.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g018230.1
  • Transcript Identifier Solyc09g018230.1.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 13673107-13675173 : negative

Gene Family Information

  • ID HOM05D000215
  • #Genes/#Species 1875/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g018230.1.1
  • uniprot A0A3Q7HZC6
  • gene_id Solyc09g018230

Descriptions

  • Description RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3C1I1_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT5G01830
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination Os05g0476700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR003613 U box domain
IPR011989 Armadillo-like helical
IPR000225 Armadillo
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase