Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 5.4e-300 1033.5 501 100.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.9e-276 955.3 502 93.2
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 9.1e-223 776.9 502 76.5
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 9.5e-212 740.3 498 72.7
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 2.8e-211 738.8 496 73.4
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 2.6e-209 732.3 501 73.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 2.6e-209 732.3 500 73.2
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 7.5e-209 730.7 499 71.7
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.2e-207 725.3 497 72.8
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 2.7e-206 722.2 477 74.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 2.7e-206 722.2 477 74.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.7e-205 719.5 494 72.3
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 6.8e-202 707.6 482 73.0
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 7.5e-201 704.1 501 69.5
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 2.2e-200 702.6 497 69.4
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.7e-200 701.8 498 70.3
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 8.3e-200 700.7 501 69.9
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.1e-199 700.3 497 68.8
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.4e-199 699.9 501 69.7
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.6e-198 696.4 506 69.2
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.0e-197 693.7 475 72.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 7.3e-196 687.6 497 67.4
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.2e-195 686.8 498 67.3
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.1e-194 683.7 498 67.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 3.4e-193 678.7 498 66.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 3.4e-193 678.7 539 64.6
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 4.9e-192 674.9 471 70.3
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.9e-191 672.9 499 65.5
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 3.5e-190 668.7 494 67.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 6.0e-190 667.9 495 68.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.7e-189 666.4 498 65.7
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 2.3e-189 666.0 497 67.2
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 9.5e-188 660.6 500 65.8
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.8e-184 648.7 521 64.1
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.2e-182 643.7 498 65.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 1.9e-180 636.3 491 65.0
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.5e-180 636.0 491 65.0
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.5e-180 636.0 498 63.5
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.2e-179 633.6 513 64.5
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 2.1e-179 632.9 501 63.1
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 6.2e-179 631.3 485 64.1
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 8.1e-179 630.9 492 65.4
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 3.1e-178 629.0 488 64.1
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 4.0e-178 628.6 510 63.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 6.9e-178 627.9 490 64.5
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.5e-177 626.7 501 63.5
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.5e-177 626.7 454 67.2
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.8e-177 624.8 454 67.2
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.3e-176 623.6 503 64.4
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 8.4e-176 620.9 514 62.3
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.2e-174 617.1 494 60.3
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.1e-174 616.3 502 61.4
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 6.0e-174 614.8 480 62.9
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.7e-173 613.2 477 64.6
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 6.6e-173 611.3 494 60.9
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 1.1e-172 610.5 492 62.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 2.5e-172 609.4 487 63.0
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.1e-171 606.3 496 61.3
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 2.1e-171 606.3 465 65.6
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 6.2e-171 604.7 481 62.6
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.8e-170 603.2 495 62.0
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 4.0e-170 602.1 497 60.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 9.0e-170 600.9 499 59.9
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 7.6e-169 597.8 456 66.2
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.3e-168 597.0 492 62.0
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 8.4e-168 594.3 469 62.9
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.4e-167 593.6 475 63.8
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 1.9e-167 593.2 494 60.7
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 4.2e-167 592.0 493 60.0
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 5.4e-167 591.7 506 59.5
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 7.1e-167 591.3 495 60.2
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 7.1e-167 591.3 503 60.2
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 7.1e-167 591.3 450 65.8
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 7.1e-167 591.3 496 60.7
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 7.9e-166 587.8 513 57.9
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.0e-165 587.4 496 60.1
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.3e-165 587.0 495 61.4
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 3.0e-165 585.9 492 60.0
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 5.1e-165 585.1 508 60.4
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.5e-164 583.6 493 60.9
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.3e-164 582.0 449 64.8
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 9.6e-164 580.9 499 59.7
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 9.6e-164 580.9 499 59.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.8e-163 579.3 493 60.6
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.2e-161 573.9 508 57.5
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 5.8e-161 571.6 498 57.6
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 7.6e-161 571.2 494 58.5
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.7e-160 570.1 490 58.8
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 3.8e-160 568.9 444 65.5
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.1e-159 567.4 315 86.7
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 5.5e-159 565.1 486 61.1
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 7.4e-156 554.7 494 57.3
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 2.1e-155 553.1 490 57.1
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 1.2e-153 547.4 455 60.7
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 9.3e-151 537.7 510 55.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.9e-143 513.5 507 54.4
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.9e-143 513.5 507 54.4
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.7e-139 500.4 497 55.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.1e-138 497.7 490 54.5
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 2.1e-134 483.4 352 70.2
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 3.5e-121 439.5 554 45.3
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 8.5e-120 434.9 491 48.1
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 7.2e-119 431.8 413 55.7
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.4e-117 427.6 549 44.8
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 5.7e-116 422.2 316 68.0
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.5e-111 405.6 402 54.7
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.8e-107 392.5 352 58.8
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 9.8e-100 368.2 497 45.1
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 7.0e-98 362.1 442 50.7
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 7.0e-98 362.1 466 43.8
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.2e-84 318.2 289 57.1
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.9e-64 250.0 139 82.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.8e-61 241.1 364 36.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 7.6e-60 235.7 409 33.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.5e-47 194.9 828 23.9
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.9e-39 167.9 336 31.8
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.0e-37 159.1 111 68.5
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.5e-34 151.0 118 63.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.8e-27 127.1 77 74.0
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.1e-25 121.3 129 52.7
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 7.9e-25 119.4 159 45.3
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 8.5e-11 72.8 60 63.3
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 4.8e-06 57.0 31 80.6


User provided reference genes

Program Settings