Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 2.6e-206 721.8 377 100.0
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.5e-172 609.8 340 94.7
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.7e-141 506.5 338 77.8
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.7e-136 490.0 338 76.3
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.9e-136 489.2 336 75.9
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 4.9e-136 488.4 349 75.6
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.4e-135 486.9 335 76.4
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 1.6e-134 483.4 348 75.3
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.6e-134 483.4 330 77.0
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.9e-132 476.5 346 74.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 5.6e-132 474.9 326 75.5
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 3.6e-131 472.2 355 71.0
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.1e-130 470.7 338 74.3
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 2.0e-129 466.5 338 72.8
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 3.4e-129 465.7 341 73.9
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.9e-128 462.6 336 73.2
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.4e-127 460.3 336 72.6
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.1e-127 458.8 336 71.1
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.4e-127 458.4 336 72.3
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 7.1e-127 458.0 336 71.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.2e-127 457.6 336 71.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.1e-126 456.4 336 71.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.7e-126 456.1 333 72.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.5e-126 455.7 336 70.8
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.0e-126 454.9 336 71.4
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 8.6e-125 451.1 334 69.5
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 4.3e-124 448.7 336 71.1
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.6e-123 446.8 335 71.3
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.1e-123 446.4 319 73.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.1e-123 446.4 323 71.2
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.8e-122 443.4 340 69.4
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.5e-121 440.3 339 69.6
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 3.4e-121 439.1 331 69.5
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 4.4e-121 438.7 329 70.2
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 2.9e-120 436.0 327 69.1
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 6.4e-120 434.9 320 72.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 4.2e-119 432.2 345 69.3
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 7.1e-119 431.4 324 69.4
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.6e-118 430.3 321 71.3
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 2.7e-118 429.5 326 69.6
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 4.6e-118 428.7 326 69.3
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 6.0e-118 428.3 326 69.6
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 7.8e-118 427.9 341 69.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.0e-117 427.6 327 67.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.7e-117 426.8 337 64.4
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.3e-117 426.4 318 70.8
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 8.7e-117 424.5 322 66.8
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.5e-116 423.7 319 69.6
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.5e-116 423.7 322 67.1
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.5e-116 423.7 322 67.1
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 4.3e-116 422.2 319 69.0
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 5.6e-116 421.8 319 69.6
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 8.1e-115 417.9 331 66.8
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 8.1e-115 417.9 320 66.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 5.3e-114 415.2 339 64.9
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.5e-113 413.7 320 65.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.3e-112 410.6 322 67.7
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-112 410.2 307 70.7
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.9e-112 409.5 324 67.6
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.9e-111 406.8 324 66.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 3.2e-111 406.0 334 64.4
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.2e-111 406.0 303 71.0
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-111 405.6 328 65.2
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-111 405.6 328 65.2
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 9.3e-111 404.4 303 69.6
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.2e-110 404.1 326 65.3
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.1e-110 403.3 341 63.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 2.1e-110 403.3 319 66.8
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.0e-110 401.7 336 64.9
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.0e-109 401.0 323 66.6
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.0e-109 401.0 328 65.2
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 6.2e-107 391.7 330 65.5
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 6.2e-107 391.7 319 62.7
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 9.9e-105 384.4 326 60.7
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.9e-104 382.9 269 72.1
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 4.2e-103 379.0 318 61.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 6.0e-102 375.2 290 65.9
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.0e-101 374.4 323 59.4
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.5e-100 370.5 319 63.0
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 4.3e-100 369.0 320 60.9
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.1e-99 366.7 331 60.1
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 4.8e-99 365.5 324 60.5
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 9.0e-98 361.3 324 60.2
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.5e-97 360.5 271 70.5
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 7.6e-97 358.2 325 59.4
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.7e-94 349.7 321 59.2
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 3.3e-92 342.8 333 59.2
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.7e-88 330.5 239 70.7
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 7.2e-87 325.1 283 58.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.1e-82 311.2 339 52.5
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.1e-79 301.2 332 52.1
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.1e-79 301.2 325 50.8
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.2e-78 297.7 324 52.8
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 2.3e-77 293.5 292 58.6
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.0e-73 280.4 317 48.3
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 7.4e-68 261.9 189 72.5
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.3e-67 258.8 323 49.8
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.4e-66 257.7 188 71.8
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.4e-66 256.9 225 64.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.0e-65 253.8 322 45.3
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 5.7e-60 235.7 206 61.7
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 3.8e-56 223.0 164 70.1
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.1e-55 221.5 201 60.2
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 8.3e-43 178.7 255 43.9
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.6e-38 163.3 112 73.2
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.0e-37 159.8 112 72.3
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.4e-29 134.8 86 81.4
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.1e-23 115.2 269 28.6
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 2.1e-22 110.9 110 58.2
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 3.2e-18 97.1 120 44.2
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.3e-13 80.9 66 65.2
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.1e-10 70.1 83 53.0


User provided reference genes

Program Settings