Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 3.2e-217 758.1 368 100.0
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 1.2e-211 739.6 368 96.7
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.4e-196 689.5 360 91.7
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 7.2e-193 677.2 361 87.3
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 6.1e-192 674.1 360 88.1
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.4e-191 672.9 358 88.3
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.4e-191 672.9 357 87.7
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 2.3e-191 672.2 357 87.1
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.5e-190 669.5 358 87.2
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 3.4e-190 668.3 361 86.4
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 5.7e-190 667.5 360 87.8
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.7e-190 667.5 359 87.2
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 7.5e-190 667.2 358 87.4
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-189 665.6 360 86.4
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.7e-189 664.8 359 87.5
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.9e-189 664.5 358 87.2
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 6.3e-189 664.1 361 87.0
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 6.3e-189 664.1 359 88.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-188 662.9 364 84.9
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.8e-188 662.5 360 85.6
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.8e-188 662.5 364 85.2
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.8e-188 662.5 358 87.4
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 4.1e-188 661.4 359 85.8
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 5.4e-188 661.0 365 85.5
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 5.4e-188 661.0 357 88.0
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 5.4e-188 661.0 357 88.0
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 7.0e-188 660.6 360 86.7
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 7.0e-188 660.6 360 86.7
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.6e-187 659.4 363 86.0
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.9e-187 657.5 360 85.6
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 5.9e-187 657.5 360 86.4
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 5.9e-187 657.5 356 87.4
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 7.8e-187 657.1 363 86.2
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 7.8e-187 657.1 356 87.1
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.3e-186 656.4 356 86.5
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.7e-186 656.0 359 85.5
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 5.0e-186 654.4 364 84.3
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.6e-186 654.1 359 84.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 8.6e-186 653.7 363 83.5
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 1.1e-185 653.3 355 86.5
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.5e-185 652.9 356 86.8
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.9e-185 652.5 361 83.9
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 4.3e-185 651.4 365 84.1
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 4.3e-185 651.4 357 84.6
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 7.3e-185 650.6 354 87.0
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 2.1e-184 649.0 381 82.2
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.1e-184 649.0 360 83.6
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 3.6e-184 648.3 362 84.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 3.6e-184 648.3 376 82.7
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 3.6e-184 648.3 371 82.2
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 3.6e-184 648.3 356 85.4
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 3.6e-184 648.3 357 86.0
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 6.1e-184 647.5 358 86.0
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 8.0e-184 647.1 358 85.5
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.0e-183 646.7 357 84.6
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.4e-183 646.4 361 85.3
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.8e-183 646.0 357 84.6
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 3.0e-183 645.2 357 84.6
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.2e-183 644.4 359 83.8
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 6.8e-183 644.0 360 84.4
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.5e-182 642.9 357 83.5
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.5e-182 642.9 355 84.8
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 4.4e-182 641.3 361 83.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.9e-181 638.6 357 83.8
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 6.4e-181 637.5 366 80.3
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.4e-180 636.3 365 81.6
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.8e-180 636.0 355 83.7
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 4.1e-180 634.8 359 84.1
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 4.1e-180 634.8 363 84.0
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 7.0e-180 634.0 361 82.3
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 2.7e-179 632.1 361 82.3
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.5e-179 631.7 370 81.6
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.5e-179 631.7 361 83.1
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 3.5e-179 631.7 354 84.2
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 7.8e-179 630.6 370 80.0
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 2.3e-178 629.0 356 81.7
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.0e-178 628.6 357 81.5
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 3.0e-178 628.6 355 83.1
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.9e-178 628.2 370 80.0
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 5.0e-178 627.9 379 79.9
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 5.0e-178 627.9 377 78.2
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 6.6e-178 627.5 354 83.1
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-177 626.3 360 81.4
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.5e-177 626.3 357 81.5
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 9.5e-177 623.6 360 80.8
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.6e-176 622.9 358 82.7
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.8e-176 622.1 368 81.8
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 1.1e-175 620.2 354 82.2
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.8e-175 619.4 360 80.3
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 8.9e-175 617.1 361 79.5
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.5e-174 616.3 356 81.2
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.8e-174 614.4 370 79.7
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 7.5e-174 614.0 363 78.0
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 7.5e-174 614.0 381 77.2
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.4e-172 609.8 356 82.0
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.4e-172 609.8 368 78.8
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 2.4e-172 609.0 347 81.8
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 2.0e-171 605.9 358 80.7
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.8e-171 604.0 367 77.9
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.3e-170 603.2 371 77.4
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.5e-169 599.7 377 75.9
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.5e-169 599.7 371 76.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.9e-169 599.4 357 80.4
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 6.2e-168 594.3 357 80.7
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.2e-168 594.3 353 80.2
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 5.8e-166 587.8 348 80.2
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 3.2e-164 582.0 359 76.0
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 5.4e-164 581.3 351 76.1
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 9.2e-164 580.5 363 75.2
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.1e-161 573.5 347 78.4
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.5e-161 572.4 357 76.8
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.2e-160 570.1 363 74.9
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.7e-160 568.2 351 75.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.8e-159 566.2 354 76.6
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 2.4e-156 555.8 298 86.6
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.4e-156 555.8 356 74.7
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.4e-156 555.8 356 74.2
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 2.1e-155 552.7 353 72.5
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.1e-153 547.0 431 65.0
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.5e-153 546.6 358 70.4
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.5e-153 546.6 358 74.9
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 7.3e-153 544.3 288 88.9
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.6e-152 542.0 331 74.9
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.7e-152 541.6 365 72.3
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 4.7e-152 541.6 371 71.7
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.2e-150 537.0 351 70.1
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.0e-147 524.6 359 71.9
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.1e-144 516.2 367 67.0
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.0e-138 495.7 290 79.7
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 2.6e-134 482.6 329 68.4
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 2.9e-133 479.2 347 64.3
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 6.0e-131 471.5 718 40.7
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.8e-130 469.9 358 64.0
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 6.7e-130 468.0 240 90.0
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 2.0e-126 456.4 310 68.1
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.2e-124 449.1 330 61.2
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.2e-120 436.4 267 76.0
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 6.9e-111 404.8 365 54.5
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.9e-110 401.7 239 77.4
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.3e-104 384.0 334 60.2
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.2e-100 368.2 331 58.0
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 3.3e-97 359.4 219 76.7
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 5.7e-97 358.6 251 65.7
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.2e-83 314.3 202 73.8
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.8e-82 310.5 290 57.6
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 2.7e-54 216.9 143 75.5
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 3.2e-47 193.4 131 73.3
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 7.1e-47 192.2 123 77.2
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 7.1e-47 192.2 131 73.3
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 2.7e-46 190.3 100 90.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.3e-45 187.2 114 78.1
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.0e-45 186.8 121 76.9
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.3e-44 183.3 168 55.4
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 3.3e-44 183.3 130 70.0
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.0e-42 176.4 98 86.7
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 8.9e-42 175.3 126 71.4
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 7.8e-38 162.2 98 74.5
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 5.8e-33 146.0 126 58.7
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-32 144.4 111 64.9
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 7.6e-25 119.0 69 79.7
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-24 117.9 77 74.0
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.2e-23 113.2 67 77.6
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 9.3e-23 112.1 64 84.4
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.5e-20 104.8 61 82.0
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.9e-20 104.4 66 69.7
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 2.0e-17 94.4 84 56.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 6.4e-16 89.4 128 43.8
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.3e-13 80.9 51 70.6
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 7.4e-12 75.9 62 59.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 2.5e-07 60.8 41 70.7
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 2.1e-06 57.8 31 87.1


User provided reference genes

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