Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0124500 Salix brachista HOM05D010014 ORTHO05D003657 6.2e-100 367.5 187 100.0
Potri.003G169850 Populus trichocarpa HOM05D000042 ORTHO05D003657 1.8e-30 136.7 94 80.9
Potri.003G170200 Populus trichocarpa HOM05D000042 ORTHO05D003657 4.6e-26 122.1 94 73.4
Potri.001G058200 Populus trichocarpa HOM05D000042 ORTHO05D003657 5.2e-14 82.0 88 58.0
Atru.chr11.2347 Acer truncatum HOM05D000042 ORTHO05D003657 4.4e-13 79.0 90 48.9
Sabra03G0124400 Salix brachista HOM05D010221 ORTHO05D013290 1.4e-11 73.9 92 52.2
Dinv17579 Davidia involucrata HOM05D010014 ORTHO05D003657 1.9e-11 73.6 97 50.5
QL03p052074 Quercus lobata HOM05D010221 ORTHO05D003657 4.1e-11 72.4 96 44.8
Solyc12g087830.2 Solanum lycopersicum HOM05D000042 ORTHO05D003657 2.3e-09 66.6 88 45.5
Cfa009378 Carpinus fangiana HOM05D000042 ORTHO05D003657 3.9e-09 65.9 91 45.1
Duzib251G0403 Durio zibethinus HOM05D000042 ORTHO05D003657 8.6e-09 64.7 87 47.1
Thecc.02G204500 Theobroma cacao HOM05D010221 ORTHO05D003657 8.6e-09 64.7 87 43.7
GSVIVG01010513001 Vitis vinifera HOM05D010221 ORTHO05D003657 1.9e-08 63.5 90 40.0
Peaxi162Scf00023g02913 Petunia axillaris HOM05D000042 ORTHO05D003657 3.3e-08 62.8 89 39.3
Manes.13G009702 Manihot esculenta HOM05D000042 ORTHO05D003657 4.3e-08 62.4 98 43.9
PGR102G1466 Punica granatum HOM05D000042 ORTHO05D003657 5.6e-08 62.0 88 42.0
Peaxi162Scf00128g01416 Petunia axillaris HOM05D010014 ORTHO05D003657 7.3e-08 61.6 62 50.0
Eucgr.H04618 Eucalyptus grandis HOM05D000042 ORTHO05D003657 9.6e-08 61.2 90 41.1
Nitab4.5_0012816g0020 Nicotiana tabacum HOM05D000042 ORTHO05D003657 9.6e-08 61.2 86 44.2
Solyc05g015720.2 Solanum lycopersicum HOM05D010014 ORTHO05D003657 9.6e-08 61.2 87 39.1
Hma1.2p1_0065F.1_g035210 Hydrangea macrophylla HOM05D000042 ORTHO05D003657 1.2e-07 60.8 90 40.0
Eucgr.K02547 Eucalyptus grandis HOM05D000042 ORTHO05D000028 1.6e-07 60.5 92 42.4
Potri.003G169700 Populus trichocarpa HOM05D000042 ORTHO05D003657 1.6e-07 60.5 93 47.3
PGR044G1798 Punica granatum HOM05D000042 ORTHO05D000028 1.6e-07 60.5 89 43.8
Potri.003G170000 Populus trichocarpa HOM05D000042 ORTHO05D003657 2.8e-07 59.7 93 46.2
MSTRG.490 Avicennia marina HOM05D000042 ORTHO05D003657 3.6e-07 59.3 91 38.5
Sopen05g011210 Solanum pennellii HOM05D000006 ORTHO05D000695 3.6e-07 59.3 87 36.8
CAN.G683.2 Capsicum annuum HOM05D000042 ORTHO05D003657 4.7e-07 58.9 97 41.2
Lsat_1_v5_gn_4_114440 Lactuca sativa HOM05D000042 ORTHO05D000028 4.7e-07 58.9 89 44.9
Nitab4.5_0001113g0020 Nicotiana tabacum HOM05D010014 ORTHO05D003657 4.7e-07 58.9 62 46.8
CAN.G683.7 Capsicum annuum HOM05D000042 ORTHO05D003657 6.2e-07 58.5 96 38.5
Actinidia08058 Actinidia chinensis HOM05D000042 ORTHO05D003657 1.1e-06 57.8 92 39.1
CAN.G683.10 Capsicum annuum HOM05D010014 ORTHO05D003657 1.1e-06 57.8 89 39.3
CAN.G683.4 Capsicum annuum HOM05D000042 ORTHO05D003657 1.1e-06 57.8 97 42.3
TWI81G0193 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 1.1e-06 57.8 89 41.6
Peaxi162Scf00023g02811 Petunia axillaris HOM05D010014 ORTHO05D003657 1.4e-06 57.4 55 50.9
Haze_12440 Corylus avellana HOM05D000042 ORTHO05D003657 2.4e-06 56.6 77 42.9
Duzib068G1188 Durio zibethinus HOM05D000042 ORTHO05D000028 2.4e-06 56.6 89 42.7
PGR119G1169 Punica granatum HOM05D000042 ORTHO05D003657 2.4e-06 56.6 91 38.5
Sopen12g029840 Solanum pennellii HOM05D000042 ORTHO05D003657 3.1e-06 56.2 94 38.3
HanXRQChr17g0538821 Helianthus annuus HOM05D000042 ORTHO05D000028 4.0e-06 55.8 98 38.8
Cfa019366 Carpinus fangiana HOM05D000042 ORTHO05D000028 5.2e-06 55.5 92 40.2
Eucgr.B03511 Eucalyptus grandis HOM05D010221 ORTHO05D003657 5.2e-06 55.5 88 38.6
Psat4g046280 Pisum sativum HOM05D000042 ORTHO05D000028 5.2e-06 55.5 97 39.2
Sed0005514 Sechium edule HOM05D000042 ORTHO05D000028 5.2e-06 55.5 89 42.7
Sopen12g029850 Solanum pennellii HOM05D000042 ORTHO05D003657 5.2e-06 55.5 78 43.6
MELO3C002050.2 Cucumis melo HOM05D000042 ORTHO05D000028 6.8e-06 55.1 89 41.6
CsaV3_1G006220 Cucumis sativus L. HOM05D000042 ORTHO05D000028 6.8e-06 55.1 89 41.6
Thecc.03G091600 Theobroma cacao HOM05D000042 ORTHO05D000028 6.8e-06 55.1 89 41.6
Thecc.03G106700 Theobroma cacao HOM05D000042 ORTHO05D000028 6.8e-06 55.1 89 41.6
Duzib084G0255 Durio zibethinus HOM05D000042 ORTHO05D000028 8.9e-06 54.7 89 41.6
Lalb_Chr13g0302721 Lupinus albus HOM05D000042 ORTHO05D000028 8.9e-06 54.7 98 38.8


User provided reference genes

Program Settings