Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0003100 Salix brachista HOM05D000974 ORTHO05D006000 6.8e-58 227.3 127 100.0
Potri.004G225500 Populus trichocarpa HOM05D000974 ORTHO05D006000 1.3e-29 133.3 78 82.1
Sabra01G0171200 Salix brachista HOM05D000974 ORTHO05D006000 1.3e-29 133.3 78 83.3
Manes.07G025100 Manihot esculenta HOM05D000974 ORTHO05D006000 3.3e-28 128.6 78 78.2
Dinv19422 Davidia involucrata HOM05D000974 ORTHO05D006000 4.3e-28 128.3 78 78.2
Thecc.02G017200 Theobroma cacao HOM05D000974 ORTHO05D006000 7.4e-28 127.5 78 76.9
MSTRG.5204 Avicennia marina HOM05D000974 ORTHO05D006000 2.1e-27 125.9 78 75.6
COL.COLO4_17713 Corchorus olitorius HOM05D000974 ORTHO05D006000 2.8e-27 125.6 78 75.6
Sopen01g045790 Solanum pennellii HOM05D000974 ORTHO05D006000 3.7e-27 125.2 78 76.9
PGSC0003DMG400024886 Solanum tuberosum HOM05D000974 ORTHO05D006000 3.7e-27 125.2 78 76.9
Atru.chr9.317 Acer truncatum HOM05D000974 ORTHO05D006000 4.8e-27 124.8 78 75.6
vmacro01708 Vaccinium macrocarpon HOM05D000974 ORTHO05D006000 6.2e-27 124.4 78 76.9
TAR381G1040 Trochodendron aralioides HOM05D000974 ORTHO05D006000 8.2e-27 124.0 78 73.1
DCAR_006665 Daucus carota HOM05D000974 ORTHO05D006000 1.1e-26 123.6 78 74.4
Prupe.1G580800 Prunus persica HOM05D000974 ORTHO05D006000 1.1e-26 123.6 78 74.4
AUR62001730 Chenopodium quinoa HOM05D000974 ORTHO05D006000 1.4e-26 123.2 78 71.8
AUR62020045 Chenopodium quinoa HOM05D000974 ORTHO05D006000 1.4e-26 123.2 78 71.8
Dinv29601 Davidia involucrata HOM05D000974 ORTHO05D006000 1.4e-26 123.2 78 75.6
QL02p100861 Quercus lobata HOM05D000974 ORTHO05D006000 1.4e-26 123.2 78 74.4
Nitab4.5_0003893g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.8e-26 122.9 78 74.4
Aqoxy1G01816 Aquilegia oxysepala HOM05D000974 ORTHO05D006000 2.4e-26 122.5 78 73.1
Migut.N00845 Erythranthe guttata HOM05D000974 ORTHO05D006000 2.4e-26 122.5 77 74.0
Nitab4.5_0002347g0020 Nicotiana tabacum HOM05D000974 ORTHO05D006000 2.4e-26 122.5 78 74.4
CANSAT54G1032 Cannabis sativa HOM05D000974 ORTHO05D006000 3.1e-26 122.1 78 74.4
Ciclev10000877m.g Citrus clementina HOM05D000974 ORTHO05D006000 3.1e-26 122.1 78 74.4
Oeu030849.1 Olea europaea HOM05D000974 ORTHO05D006000 3.1e-26 122.1 78 75.6
Carub.0001s0921 Capsella rubella HOM05D000974 ORTHO05D006000 5.3e-26 121.3 78 71.8
Gohir.D01G176200 Gossypium hirsutum HOM05D000974 ORTHO05D006000 5.3e-26 121.3 76 76.3
Peaxi162Scf00011g01426 Petunia axillaris HOM05D000974 ORTHO05D006000 5.3e-26 121.3 78 74.4
Solyc01g103440.3 Solanum lycopersicum HOM05D000974 ORTHO05D006000 5.3e-26 121.3 78 75.6
Duzib132G0946 Durio zibethinus HOM05D000974 ORTHO05D006000 6.9e-26 120.9 78 71.8
Nitab4.5_0003816g0050 Nicotiana tabacum HOM05D000974 ORTHO05D006000 6.9e-26 120.9 78 74.4
PGR142G3566 Punica granatum HOM05D000974 ORTHO05D006000 6.9e-26 120.9 78 74.4
SalBow4G1817 Salvia bowleyana HOM05D000974 ORTHO05D006000 6.9e-26 120.9 78 71.8
MBI06_g06706_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D006000 1.2e-25 120.2 78 70.5
Nn5g27502 Nelumbo nucifera HOM05D000974 ORTHO05D006000 1.2e-25 120.2 78 71.8
Rhsim07G0227800 Rhododendron simsii HOM05D000974 ORTHO05D006000 1.2e-25 120.2 78 75.6
arahy.Tifrunner.gnm1.ann1.0Q8MRK Arachis hypogaea HOM05D000974 ORTHO05D006000 1.5e-25 119.8 78 71.8
arahy.Tifrunner.gnm1.ann1.DWF5LU Arachis hypogaea HOM05D000974 ORTHO05D006000 1.5e-25 119.8 78 71.8
MD08G1243400 Malus domestica HOM05D000974 ORTHO05D006000 1.5e-25 119.8 78 71.8
Duzib052G0127 Durio zibethinus HOM05D000974 ORTHO05D006000 2.0e-25 119.4 78 71.8
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.0e-25 119.4 89 64.0
CAN.G855.13 Capsicum annuum HOM05D000974 ORTHO05D006000 2.6e-25 119.0 78 73.1
SalBow8G2098 Salvia bowleyana HOM05D000974 ORTHO05D006000 2.6e-25 119.0 78 71.8
Gohir.A01G185000 Gossypium hirsutum HOM05D000974 ORTHO05D006000 3.4e-25 118.6 76 75.0
Gorai.002G218200 Gossypium raimondii HOM05D000974 ORTHO05D006000 3.4e-25 118.6 76 75.0
Atru.chr1.4075 Acer truncatum HOM05D000974 ORTHO05D006000 4.5e-25 118.2 78 71.8
Gohir.D12G043400 Gossypium hirsutum HOM05D000974 ORTHO05D006000 4.5e-25 118.2 78 73.1
Lalb_Chr21g0311651 Lupinus albus HOM05D000974 ORTHO05D006000 4.5e-25 118.2 78 71.8
AL1G20430 Arabidopsis lyrata HOM05D000974 ORTHO05D006000 5.8e-25 117.9 78 70.5
Os08g0191200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 5.8e-25 117.9 78 70.5
Psat2g146560 Pisum sativum HOM05D000974 ORTHO05D006000 5.8e-25 117.9 78 70.5
Rhsim07G0227600 Rhododendron simsii HOM05D000974 ORTHO05D006000 5.8e-25 117.9 78 74.4
TPR.G5252 Trifolium pratense HOM05D000974 ORTHO05D006000 5.8e-25 117.9 78 70.5
CSS0025059 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 70.5
Cfa004480 Carpinus fangiana HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 73.1
Haze_10037 Corylus avellana HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 74.4
ECA236G4964 Erigeron canadensis HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 73.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 71.8
Gorai.008G045600 Gossypium raimondii HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 73.1
TWI15G1214 Tripterygium wilfordii HOM05D000974 ORTHO05D006000 7.6e-25 117.5 78 73.1
AT1G09830 Arabidopsis thaliana HOM05D000974 ORTHO05D006000 1.0e-24 117.1 78 69.2
Ca_04891_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 1.0e-24 117.1 78 70.5
Cc02_g23270 Coffea canephora HOM05D000974 ORTHO05D006000 1.0e-24 117.1 78 71.8
Hund18885 Selenicereus undatus HOM05D000974 ORTHO05D006000 1.0e-24 117.1 78 70.5
EL10Ac7g16076 Beta vulgaris HOM05D000974 ORTHO05D006000 1.7e-24 116.3 78 67.9
Phvul.007G182100 Phaseolus vulgaris HOM05D000974 ORTHO05D006000 1.7e-24 116.3 78 70.5
HanXRQChr11g0329691 Helianthus annuus HOM05D000974 ORTHO05D006000 2.2e-24 115.9 78 71.8
Lj5C267T12 Lonicera japonica HOM05D000974 ORTHO05D006000 2.2e-24 115.9 78 71.8
Medtr5g025310 Medicago truncatula HOM05D000974 ORTHO05D006000 2.2e-24 115.9 78 70.5
VMungo0720G1793 Vigna mungo HOM05D000974 ORTHO05D006000 2.2e-24 115.9 78 70.5
Actinidia38994 Actinidia chinensis HOM05D000974 ORTHO05D006000 2.9e-24 115.5 78 69.2
CSS0010237 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 2.9e-24 115.5 78 69.2
Glyma.10G156900 Glycine max HOM05D000974 ORTHO05D006000 2.9e-24 115.5 78 69.2
Lsat_1_v5_gn_7_76800 Lactuca sativa HOM05D000974 ORTHO05D006000 2.9e-24 115.5 78 71.8
CSS0011192 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 3.8e-24 115.2 78 69.2
CARHR009850 Cardamine hirsuta HOM05D000974 ORTHO05D006000 3.8e-24 115.2 78 67.9
Ca_12589_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 3.8e-24 115.2 78 69.2
unitig_8.g3588 Utricularia gibba HOM05D000974 ORTHO05D006000 3.8e-24 115.2 78 71.8
GSVIVG01038784001 Vitis vinifera HOM05D000974 ORTHO05D006000 3.8e-24 115.2 78 69.2
Cpa.g.sc113.32 Carica papaya HOM05D000974 ORTHO05D006000 4.9e-24 114.8 78 70.5
MD15G1437700 Malus domestica HOM05D000974 ORTHO05D006000 4.9e-24 114.8 78 70.5
Sc17g0003920 Simmondsia chinensis HOM05D000974 ORTHO05D006000 4.9e-24 114.8 78 69.2
Ah.08g220180 Amaranthus hybridus HOM05D000974 ORTHO05D006000 6.5e-24 114.4 78 67.9
A08p34320 Brassica napus HOM05D000974 ORTHO05D006000 6.5e-24 114.4 78 69.2
HPP92_026669 Vanilla planifolia HOM05D000974 ORTHO05D006000 6.5e-24 114.4 78 66.7
BraA08t35343Z Brassica rapa HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 69.2
Eucgr.I02775 Eucalyptus grandis HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 69.2
Thhalv10007333m.g Eutrema salsugineum HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 67.9
HanXRQChr06g0176431 Helianthus annuus HOM05D000974 ORTHO05D006000 8.4e-24 114.0 95 64.2
Lj5g0022297 Lotus japonicus HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 70.5
Rhsim11G0122100 Rhododendron simsii HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 71.8
THA.LOC104816783 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 8.4e-24 114.0 78 69.2
CDE04G1010 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 1.4e-23 113.2 78 65.4
BolC8t48951H Brassica oleracea HOM05D000974 ORTHO05D006000 1.9e-23 112.8 78 69.2
SEGI_14806 Sequoiadendron giganteum HOM05D000974 ORTHO05D006000 1.9e-23 112.8 78 66.7
SGA_v2.0_scaffold42G15899 Striga asiatica HOM05D000974 ORTHO05D006000 1.9e-23 112.8 78 65.4
THA.LOC104816816 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.9e-23 112.8 78 66.7
BcaB03g13541 Brassica carinata HOM05D000974 ORTHO05D006000 2.5e-23 112.5 78 69.2
BcaC07g38528 Brassica carinata HOM05D000974 ORTHO05D006000 2.5e-23 112.5 78 67.9
Sp1g08460 Schrenkiella parvula HOM05D000974 ORTHO05D006000 2.5e-23 112.5 78 67.9
Os12g0197100 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 3.2e-23 112.1 85 58.8
Zm00001eb294330 Zea mays HOM05D000974 ORTHO05D006000 3.2e-23 112.1 78 66.7
ATR0598G043 Amborella trichopoda HOM05D000974 ORTHO05D006000 5.5e-23 111.3 78 65.4
A06p06550 Brassica napus HOM05D000974 ORTHO05D006000 5.5e-23 111.3 78 66.7
CiPaw.06G174600 Carya illinoinensis HOM05D000974 ORTHO05D006000 5.5e-23 111.3 78 69.2
ClCG10G007320 Citrullus lanatus HOM05D000974 ORTHO05D006000 5.5e-23 111.3 78 65.4
Sed0019412 Sechium edule HOM05D000974 ORTHO05D006000 5.5e-23 111.3 78 64.1
BcaC05g24841 Brassica carinata HOM05D000974 ORTHO05D006000 7.1e-23 110.9 78 66.7
C05p07940 Brassica napus HOM05D000974 ORTHO05D006000 9.3e-23 110.5 78 66.7
BolC5t29546H Brassica oleracea HOM05D000974 ORTHO05D006000 9.3e-23 110.5 78 66.7
PSO782G2965 Papaver somniferum HOM05D000974 ORTHO05D006000 1.2e-22 110.2 101 54.5
Aa31LG1G5090 Aethionema arabicum HOM05D000974 ORTHO05D006000 1.6e-22 109.8 78 67.9
BraA06t23866Z Brassica rapa HOM05D000974 ORTHO05D006000 3.5e-22 108.6 78 65.4
MELO3C016483.2 Cucumis melo HOM05D000974 ORTHO05D006000 1.8e-21 106.3 78 61.5
CsaV3_3G006560 Cucumis sativus L. HOM05D000974 ORTHO05D006000 1.8e-21 106.3 78 61.5
PSO170G5315 Papaver somniferum HOM05D000974 ORTHO05D006000 2.3e-21 105.9 88 56.8
Pp3c19_9430 Physcomitrium patens HOM05D000974 ORTHO05D006000 2.3e-21 105.9 77 63.6
Zm00001eb342350 Zea mays HOM05D000974 ORTHO05D006000 2.3e-21 105.9 78 65.4
HPP92_001871 Vanilla planifolia HOM05D000974 ORTHO05D006000 3.0e-21 105.5 78 62.8
Pp3c22_7830 Physcomitrium patens HOM05D000974 ORTHO05D006000 8.7e-21 104.0 77 62.3
SMO358G0426 Selaginella moellendorffii HOM05D000974 ORTHO05D006000 1.1e-20 103.6 78 61.5
Eucgr.I02773 Eucalyptus grandis HOM05D000974 ORTHO05D006000 3.3e-20 102.1 77 66.2
Mapoly0041s0149 Marchantia polymorpha HOM05D000974 ORTHO05D006000 1.8e-18 96.3 78 59.0
CSS0022082 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 4.1e-18 95.1 64 68.8
CBR_g36226 Chara braunii HOM05D000974 ORTHO05D006000 9.0e-18 94.0 78 53.8
Cre18.g749497 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 5.5e-15 84.7 79 50.6
Cre18.g749647 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 5.5e-15 84.7 79 50.6
AagrBONN_evm.TU.Sc2ySwM_368.1734 Anthoceros agrestis HOM05D000974 ORTHO05D006000 9.4e-15 84.0 78 52.6
FAN10G2816 Fragaria x ananassa HOM05D000974 ORTHO05D006000 6.1e-14 81.3 64 64.1
MCO16G439 Micromonas commoda HOM05D000974 ORTHO05D006000 5.1e-13 78.2 77 53.2
Pp3s32_121 Physcomitrium patens HOM05D000974 ORTHO05D006000 1.3e-08 63.5 78 48.7
PRCOL_00005058 Prasinoderma coloniale HOM05D000974 ORTHO05D006000 1.3e-08 63.5 88 45.5
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 4.7e-06 55.1 55 49.1
CDE02G0137 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 4.7e-06 55.1 43 60.5


User provided reference genes

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