Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0088000 Salix brachista HOM05D006001 ORTHO05D006714 1.8e-185 652.5 346 100.0
Potri.002G111500 Populus trichocarpa HOM05D006001 ORTHO05D006714 1.6e-157 559.7 346 87.3
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 1.2e-109 400.6 334 69.5
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 2.1e-61 240.4 365 47.7
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.6e-48 197.6 373 40.5
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 5.1e-47 192.6 376 39.9
Atru.chr13.1002 Acer truncatum HOM05D006001 ORTHO05D006714 2.1e-45 187.2 379 37.5
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 6.2e-45 185.7 386 41.2
Ciclev10001506m.g Citrus clementina HOM05D006001 ORTHO05D006714 2.4e-44 183.7 393 38.9
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 9.0e-44 181.8 372 39.0
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 1.3e-42 177.9 376 39.9
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 3.2e-41 173.3 394 39.1
Duzib128G1071 Durio zibethinus HOM05D006001 ORTHO05D006714 5.4e-41 172.6 391 38.1
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.6e-40 171.0 377 36.6
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 2.1e-40 170.6 388 39.9
TWI12G0152 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 5.1e-39 166.0 344 38.4
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.1e-38 164.9 378 37.8
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 3.3e-38 163.3 403 36.0
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.3e-37 161.4 373 39.4
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 6.2e-37 159.1 366 39.1
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 2.4e-36 157.1 348 37.9
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 3.1e-36 156.8 348 37.9
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 9.0e-36 155.2 347 37.2
Glyma.02G215100 Glycine max HOM05D006001 ORTHO05D006714 1.5e-35 154.5 368 34.2
Duzib106G1137 Durio zibethinus HOM05D006001 ORTHO05D006714 2.9e-34 150.2 392 38.3
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 8.4e-34 148.7 438 32.6
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 1.6e-32 144.4 440 30.2
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 2.1e-32 144.1 386 35.5
MELO3C021835.2 Cucumis melo HOM05D006001 ORTHO05D006714 2.7e-32 143.7 359 37.3
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 6.0e-32 142.5 379 34.8
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 3.9e-31 139.8 371 36.1
PGR042G0630 Punica granatum HOM05D006001 ORTHO05D006714 1.9e-30 137.5 353 34.0
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 9.6e-30 135.2 358 35.8
AT4G24500 Arabidopsis thaliana HOM05D006001 ORTHO05D006714 3.7e-29 133.3 355 35.8
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 3.7e-29 133.3 364 33.2
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 1.8e-28 131.0 357 37.0
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 3.1e-28 130.2 353 34.8
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 3.1e-28 130.2 376 32.2
ClCG09G016810 Citrullus lanatus HOM05D006001 ORTHO05D006714 4.0e-28 129.8 357 34.5
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 5.3e-28 129.4 349 35.2
THA.LOC104806890 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 5.3e-28 129.4 374 31.8
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 9.0e-28 128.6 350 36.0
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea HOM05D006001 ORTHO05D006714 2.6e-27 127.1 349 36.1
BcaC09g50862 Brassica carinata HOM05D006001 ORTHO05D006714 2.6e-27 127.1 361 33.2
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 4.5e-27 126.3 356 36.8
Sp7g22490 Schrenkiella parvula HOM05D006001 ORTHO05D006714 2.2e-26 124.0 356 32.9
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 2.9e-26 123.6 370 33.8
Solyc04g076410.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 3.8e-26 123.2 348 35.3
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea HOM05D006001 ORTHO05D006714 8.4e-26 122.1 367 34.9
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 2.5e-25 120.6 358 33.0
PGSC0003DMG400009339 Solanum tuberosum HOM05D006001 ORTHO05D006714 2.5e-25 120.6 351 34.5
A03p55330 Brassica napus HOM05D006001 ORTHO05D006714 3.2e-25 120.2 363 33.6
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 4.2e-25 119.8 356 32.9
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 7.1e-25 119.0 356 33.1
Sopen04g030170 Solanum pennellii HOM05D006001 ORTHO05D006714 9.3e-25 118.6 349 34.7
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 1.2e-24 118.2 356 33.4
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 2.7e-24 117.1 360 35.3
Thhalv10025760m.g Eutrema salsugineum HOM05D006001 ORTHO05D006714 3.5e-24 116.7 358 33.2
LjContig00408g0013719 Lotus japonicus HOM05D006001 ORTHO05D006714 1.0e-23 115.2 358 31.3
MD08G1199700 Malus domestica HOM05D006001 ORTHO05D006714 1.0e-23 115.2 352 30.4
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 1.3e-23 114.8 392 31.9
Hund26817 Selenicereus undatus HOM05D006001 ORTHO05D006714 2.3e-23 114.0 360 32.8
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 6.7e-23 112.5 354 33.3
BraA01t01521Z Brassica rapa HOM05D002298 ORTHO05D006714 1.1e-22 111.7 357 31.9
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 1.9e-22 110.9 354 33.3
AL7G28720 Arabidopsis lyrata HOM05D006001 ORTHO05D006714 2.5e-22 110.5 350 31.7
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 2.5e-22 110.5 374 34.0
CARHR231890 Cardamine hirsuta HOM05D006001 ORTHO05D006714 5.7e-22 109.4 352 32.4
Medtr5g066450 Medicago truncatula HOM05D006001 ORTHO05D006714 9.7e-22 108.6 356 33.7
BcaC06g32880 Brassica carinata HOM05D006001 ORTHO05D006714 1.3e-21 108.2 347 32.9
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 1.3e-21 108.2 342 31.9
BraA03t14592Z Brassica rapa HOM05D006001 ORTHO05D006714 4.8e-21 106.3 360 31.9
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 4.8e-21 106.3 439 29.2
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 1.4e-20 104.8 422 29.4
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 1.8e-20 104.4 349 30.4
Psat2g065160 Pisum sativum HOM05D006001 ORTHO05D006714 2.4e-20 104.0 360 31.9
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 4.1e-20 103.2 432 29.4
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 6.9e-20 102.4 371 32.3
Phvul.008G182500 Phaseolus vulgaris HOM05D006001 ORTHO05D006714 9.0e-20 102.1 433 28.9
TPR.G34712 Trifolium pratense HOM05D006001 ORTHO05D006714 1.2e-19 101.7 365 32.6
Aa31LG4G9600 Aethionema arabicum HOM05D006001 ORTHO05D006714 2.6e-19 100.5 368 31.5
Nn5g29866 Nelumbo nucifera HOM05D006001 ORTHO05D006714 4.5e-19 99.8 305 31.5
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 5.9e-19 99.4 354 32.2
BolC7t45854H Brassica oleracea HOM05D006001 ORTHO05D006714 1.3e-18 98.2 370 30.0
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 1.3e-18 98.2 436 28.9
TAR376G0788 Trochodendron aralioides HOM05D006001 ORTHO05D006714 2.9e-18 97.1 238 37.0
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 5.0e-18 96.3 391 30.4
EL10Ac1g00506 Beta vulgaris HOM05D034668 ORTHO05D006714 2.1e-16 90.9 451 26.6
FAN08G3160 Fragaria x ananassa HOM05D006001 ORTHO05D006714 1.0e-15 88.6 446 26.2
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 1.0e-15 88.6 352 27.6
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 2.3e-15 87.4 413 31.7
Ca_05452_v3 Cicer arietinum L. HOM05D006001 ORTHO05D006714 5.1e-15 86.3 365 30.7
Lj6g0019377 Lotus japonicus HOM05D006001 ORTHO05D006714 5.1e-15 86.3 310 29.0
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 6.7e-15 85.9 373 28.4
unitig_578.g16728 Utricularia gibba HOM05D006001 ORTHO05D006714 8.8e-15 85.5 355 29.9
SHI11237 Sapria himalayana HOM05D006001 ORTHO05D006714 2.5e-14 84.0 205 39.0
Sed0021215 Sechium edule HOM05D006001 ORTHO05D006714 4.3e-14 83.2 224 36.2
Lalb_Chr17g0344581 Lupinus albus HOM05D006001 ORTHO05D006714 7.4e-14 82.4 350 31.1
Nitab4.5_0019796g0010 Nicotiana tabacum HOM05D006001 ORTHO05D006714 7.4e-14 82.4 213 35.7
SHI11238 Sapria himalayana HOM05D006001 ORTHO05D006714 1.7e-13 81.3 123 48.0
ATR0767G016 Amborella trichopoda HOM05D006001 ORTHO05D006714 2.2e-13 80.9 398 27.9
HPP92_021096 Vanilla planifolia HOM05D006001 ORTHO05D006714 2.2e-13 80.9 364 33.2
Aqoxy5G01371 Aquilegia oxysepala HOM05D006001 ORTHO05D006714 6.3e-13 79.3 446 26.0
FAN13G1830 Fragaria x ananassa HOM05D006001 ORTHO05D006714 1.4e-12 78.2 447 26.6
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 1.4e-12 78.2 353 30.3
VMungo1127G1493 Vigna mungo HOM05D006001 ORTHO05D006714 1.8e-12 77.8 137 40.1
Migut.C00706 Erythranthe guttata HOM05D006001 ORTHO05D006714 3.1e-12 77.0 369 33.1
RcHm_v2.0_Chr7g0235791 Rosa chinensis HOM05D006001 ORTHO05D006714 4.1e-12 76.6 213 34.3
FvH4_5g34870 Fragaria vesca HOM05D006001 ORTHO05D006714 6.9e-12 75.9 212 34.0
FAN18G3411 Fragaria x ananassa HOM05D006001 ORTHO05D006714 2.0e-11 74.3 210 32.9
Nitab4.5_0000131g0110 Nicotiana tabacum HOM05D006001 ORTHO05D006714 6.5e-10 69.3 238 33.6
Os02g0510300 Oryza sativa ssp. japonica HOM05D034158 ORTHO05D037074 6.5e-10 69.3 199 33.2
Dinv44865 Davidia involucrata HOM05D006001 ORTHO05D006714 3.2e-09 67.0 286 28.3
CAN.G475.17 Capsicum annuum HOM05D006001 ORTHO05D006714 5.5e-09 66.2 73 49.3
CDE06G1720 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 1.6e-08 64.7 134 40.3
ECA240G2279 Erigeron canadensis HOM05D006001 ORTHO05D006714 2.7e-08 63.9 142 33.8
SEGI_15482 Sequoiadendron giganteum HOM05D006001 ORTHO05D006714 3.6e-08 63.5 131 35.1
THA.LOC104799788 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 1.8e-07 61.2 324 28.4
C07p53620 Brassica napus HOM05D006001 ORTHO05D006714 2.3e-07 60.8 191 33.5
Sed0021655 Sechium edule HOM05D006001 ORTHO05D006714 3.9e-07 60.1 77 46.8
CDE06G2035 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 5.1e-07 59.7 75 46.7
CDE04G0496 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 8.8e-07 58.9 349 28.1
AUR62014355 Chenopodium quinoa HOM05D034668 ORTHO05D006714 8.8e-07 58.9 252 27.0
Peaxi162Scf00454g00211 Petunia axillaris HOM05D006001 ORTHO05D006714 7.4e-06 55.8 279 29.7


User provided reference genes

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